Lfer010491.1
Basic Information
- Insect
- Luffia ferchaultella
- Gene Symbol
- -
- Assembly
- GCA_949709985.1
- Location
- OX453248.1:19289689-19308851[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00011 0.15 12.9 5.2 3 40 61 97 59 101 0.84 2 8 2.7e-05 0.037 14.9 2.6 3 43 163 201 162 202 0.90 3 8 3.6e-05 0.048 14.5 2.8 3 43 263 301 262 302 0.90 4 8 4.7e-10 6.4e-07 30.1 4.7 3 43 365 403 363 404 0.95 5 8 5.2e-06 0.007 17.2 0.2 6 43 432 466 429 467 0.95 6 8 3e-11 4e-08 34.0 2.4 3 44 561 601 559 601 0.97 7 8 1.3e-08 1.8e-05 25.5 3.1 3 44 663 703 661 703 0.93 8 8 0.0039 5.2 8.0 0.1 3 43 739 780 737 781 0.86
Sequence Information
- Coding Sequence
- ATGAAGATTAAGCATCCGAATGAGTATCAAAAATACGACGAATTCGAagatatagaaaattattttataattaccaaAAACTTGGACAGTTGCAGTGATGGATCAAACTCAAGCGACGAAAATGAACAAGATCCTCTTGCCAAGAATACACGTGTTAAAGGCACAAAATCACACAGTTGGATATGGTCATATTTTATAAGGATTGGACAGTATGTGTATACATGTAAATTTTGCAATAGGACATTCAAAAACACGAGAAAATGCGCTTGGAACTTGGTTCGACACGCGAAAATATTTCATCAAAGGTTGTATGAGGCTTATGAAGACCAGAACCCAGAAGAAATCAAATatcatatgaaaattattaaagacCTTGAAATGGATGAAGAAATGGACAGTTCGGTCGTTACCGATGAAAACGTTCAAGATGACACAGCTCCTGATAAATATGATGTTTCACAAAgcGACGACAAACGACGTTGTTGGATTTGGTCATATTTTTCAAGGAGTGGCGACGAGTACACCTGCAAATTCTGtaataagaaattaataaacacGCGTAAATCCGCTTTCAACTTGATTCGACACACAAAAGTATTTCATCGAAGGTTGTATGAAGCTTATATTAACGAGAATTCAAAAGAAATTGACTATCACTTGGAAATTGTCAAGGACGTTACAAACGATGAAGAAATGAACAGTTCAGTTATCGATGAAAATGCTCAGGATCACACAACTTCTGATAAATATGACGTTTCTGAGAgcGACGACAAACGACGCTGTTGGATTTGGTCATATTTTTCAAGGAGTGGCGACGAGTACACCTGCAAATTCTGTAACAAGAAATTCATTAACACGCGAAAATCCGCTTTCAATTTGATGCGACACACAAAAGTATTTCATCGAAGGTTGTATGAAGCTTATATTAACGAGGATTCAAATGAAATTGACTATCATTTGGAAATTGTCAAAGACATTACAAAGGGTGCAGAAATGGACAGTTCAGTTACTGATGAAAATGCTAAGGATGATACAACTTCTGATAAAAATGATGTTTCTGAGGGAGAAAAACCTAAAGCACCGAAGAGTTGGGCGTGGTCCTACTTCATCGTCAAATCGAAATACACAGCTATGTGTAAAATCTGTAAGAAGACTGTAGCTTACACTCATGGGTCTAACAACTTGGTGCGTCATCTACATGTGAGGCACGCCTTAGTAGGAAAGGAATATAATGTATGTGAAAACGATCCAGTCGAATTAAAAGaCACAACTAAAATAGATTGGGTGTCCATTTACTTCACGAATTTATCGGGAAATACTTATCGTTGTAATGTATGTCAAAATGTAATACAAATTGTTGGCGACAAAAATTTAGTGCAACACATACAAGAAAAACATATGGATATATATGTACTTCATAAACAAGGAGATGACGAAGTCATGGGATTCCAAATTGAGTTCTTGCAATTGAACGTGTTGAAGGGCGACGAGACAAACGACGCTACAACGCCGCCGCCTGTCGGTAAAATAAAAAcggtaaaaacaattaaagcAAAGAAATTAGATCCCATACTGGACTGTGAACACGATTATTTGGTTACCGATCCGAAAAAGAAGGCCACATTGATTGCAGttttaaatcaTTCATCATCATTTCCAGAAGGCAGAAAAAGGAGCTGGGTATggaaatatttcgaaaaattaagCAACATCGTGTTCCGTTGTAAAGTTTGTGGAGTGGCTTTGTCTATAAAAGGGTGCAACACCAATAATATGAACCGTCACGTTAAAAGCAAACACCCGCATATATACAAGACGGAGGCCGGCAAAAGCTATTGCTCCGAACAAGTCAGCGACATAGGCAGCGAAGTTGAGATACCGAATTTGAACTGGGTCGATGACATGGAATTATCGAAAAACCCAACAAAAGACCCGGACTTTATTATTTGCGAGACGGTGCGTAAAAAGCCGAAACCCCGAAGTTGGATTTGGGATTACTTCACTCGGGTGTCGGCAACGTTGGCTCAGTGCAAACTGTGCTCTCGGAACATATGCCATGGGGGAAACGCCACGGGTAACATGAATCGCCACATGAAAATGCTACACAAAGACTTTTACGTCAAATATGTGCTTGTCAGTGGAGAAGGTGGAGAAGACTTCTGTATGAAAAGTGGAGAAAACTCCATTGTCAAATCTGAAGAAGAATTCTCTTGGATCTGGAAACTGTTTACAGACGAAGACGGATTCTACGTTTGCAAGATATGCACATTCAAATTTATGAAATTGGACGATATGAACACCAGCGTTGCATCGATATTGCAACATTTGAAATCGGAACACGGTGTTGTTTCAGATGACCAAATCATTATGGGTACAGAATGTGGCAACACCATCGATGAATGCACCGTGGCAGTCGACTTTCTAAAAGATTCAGAGGATATTTAG
- Protein Sequence
- MKIKHPNEYQKYDEFEDIENYFIITKNLDSCSDGSNSSDENEQDPLAKNTRVKGTKSHSWIWSYFIRIGQYVYTCKFCNRTFKNTRKCAWNLVRHAKIFHQRLYEAYEDQNPEEIKYHMKIIKDLEMDEEMDSSVVTDENVQDDTAPDKYDVSQSDDKRRCWIWSYFSRSGDEYTCKFCNKKLINTRKSAFNLIRHTKVFHRRLYEAYINENSKEIDYHLEIVKDVTNDEEMNSSVIDENAQDHTTSDKYDVSESDDKRRCWIWSYFSRSGDEYTCKFCNKKFINTRKSAFNLMRHTKVFHRRLYEAYINEDSNEIDYHLEIVKDITKGAEMDSSVTDENAKDDTTSDKNDVSEGEKPKAPKSWAWSYFIVKSKYTAMCKICKKTVAYTHGSNNLVRHLHVRHALVGKEYNVCENDPVELKDTTKIDWVSIYFTNLSGNTYRCNVCQNVIQIVGDKNLVQHIQEKHMDIYVLHKQGDDEVMGFQIEFLQLNVLKGDETNDATTPPPVGKIKTVKTIKAKKLDPILDCEHDYLVTDPKKKATLIAVLNHSSSFPEGRKRSWVWKYFEKLSNIVFRCKVCGVALSIKGCNTNNMNRHVKSKHPHIYKTEAGKSYCSEQVSDIGSEVEIPNLNWVDDMELSKNPTKDPDFIICETVRKKPKPRSWIWDYFTRVSATLAQCKLCSRNICHGGNATGNMNRHMKMLHKDFYVKYVLVSGEGGEDFCMKSGENSIVKSEEEFSWIWKLFTDEDGFYVCKICTFKFMKLDDMNTSVASILQHLKSEHGVVSDDQIIMGTECGNTIDECTVAVDFLKDSEDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -