Lfer012166.1
Basic Information
- Insect
- Luffia ferchaultella
- Gene Symbol
- -
- Assembly
- GCA_949709985.1
- Location
- OX453250.1:11623502-11626410[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-10 2.1e-07 31.3 0.0 2 39 17 54 16 59 0.90
Sequence Information
- Coding Sequence
- atgCCTAACCAGTACGTACGGATTTCGCACGATCGTGGCAAGTGGACGCAAGAGGGTCTGACACAAGCAGTCGAAGCAATTCTAAACAGAAATCTCTTTGTCCGTCAAGCTAGCATCGAGTACGGCGTACCACGAAAAACCTTGGAGAGGCGCTTCAAGACCCAAGATTTCACTAAGGGCCCTATGGGTCCTTCATCAGTTTTTGGAACCGATCATGAAAAAAGACTAGTACGACACATTTTAAAGATGCAAGATAATTGTTTTCCATTAACTCCAAAAGATTTGAGAAGCATTGCTTTCAATTTCGCCGAACAGCTGGGTCTCAAACATACctttaacaaagaaaaagagGAAGCTGGATATGTCTGGTTACAGTCATTTTTGAAAAGGAACCCTGAAATAAAGATCAGAAAGGCTGAAGGTGTGTCACTGGCGCGCTGCGAAGCACTCAACCGAGATGAAGTAAACGCATATTACGATATACTGTTCAGCTTGCTAGAAGAATATGAGTTGTTTGAGAAACCCTCTCATATCTTCAACATGGACGAATCAGGACTGCAATTAAATAATAGACCTGGACACGTGCTTGCGAAAAAGGGATCTAAGGCGGTTTCTACAGTGACCTCAACAGAAAAAGGTGAGACGATTACAGTCATTGGGTGTTGTAATGCTGAAGGAATTTTCCTTCCACCTGCATGCATaatgaaaggaaaaaataaaaaacaaaaatggcaAGATGGAATGCCACCTGGTTCTGTGCTATTTATGTCACAAAAATCCGCCTATATTAatgcaacaatattttttgaatggctaaaaacacatttcttgccAAGGAAAGCGGCTGGAAAAGTCTTACTTTGTCTAGATGGCCATACATCTCACTGCAACTCTGTAGAGATCTTAGAATTTGCTGCTGCTAATGACATCATCTTATTCACACTACCAAGCCACACGACACACTACCTTCAAACACTTGACAGATCAGTGTTTAAGTCACTTAAAGCATTTTATTATGAAGCATGTCGTATGTGGCTTAAAAGAAATCCCGGAAGGCGTCTCACCCGACTGCAATTCGCCCCTTGCTCCCCTAAATCAGCAACATATGAAAATGCCACAGCCGGCTTCAAAGCAACGGGAATTTATCCCTTTAATCGCTATGCAGTTCCCGATCATGCTTTTGCCACGACAAACATGCAGACTGACGAGAGTCAACGTCATCGACCCTCGAGTGCCACAGTTACACGCAGGACCAGCAGCCCTTCGGTACTCCAAGTCGGACCCGATCAATTCAGTACATCCGAAATTCACACTTTACAAAGGTGCAGTAGCCCTTGTCTACCTTCTGTGAAACCAAGTCATTCCAGTTCATCTGGAAACAAGGCTCCACTGAACCCAGCTTTTAATCCTAATCAACCTGATCTGTCTAGAATTCAAGCTCCATCACGAGATAGCACTCCTTCTTTGCCTGACTATGTGGAAACTATTGAGCATGGTCCACCTGAAATGCAAACTTTACGAAATATCTGTACAACTCTTCCGCATGAGGTACAATCAATTGAGCCTGGCCCATCGTACATACttgctttaaaaaataacagaaaCTCTGTTCTTTCTCCGGCACAGAAAAACAATAATCAATCTGTCGAATCAGTTATTCAGCAAACACCGGCTTCAAAAGAGAATGAAGAAGAGACACCATCTAAATTTTTAACTGAAATATCTCCTATTTCTTTGAAAACTTACCAAGTTCGAAGTCGAGCAAAACAAGTGGCGAAGATACTAACTTCTGAAACTCATATAAACTATCGAAAAGAATgtgaagaaaagaaaaatgacaAGCAAGTTAGATCTAACAACAATGTAAggaagagaaaaataaaacaagagaAAACTATTGGCAAAGAATCtaacgaaaaaaattggaaaagaaACCGACgaggaaaagaaaaagaagatgaGCCAGTTCAAAAGAAAACTAAgcagaagaaaaataatatgaataagaGACAGAAGATAAACAAGAGACAGGAATCTACGGATACGGAAGATGATGATGAGCCTATTCTTCTCGAGAGCGGTGATTCTTCTCCTGTAAGTTCTCTGATTGATGACTGTGTAGGTTGTGGTGATAATTATTATACGACAGAATTGACAGAAGAATGGATTCAATGTGTCATATGCAAGCGGTGGGCTCACGAAAACTGCACTGAGTATGACGATAAATGTCACCCCTGTGgcaataaaatcaaaatcgaTGCTAGAAAACGTAAAGGAAAAGGGAAAAAGACTAAAAGCGCGAATTAA
- Protein Sequence
- MPNQYVRISHDRGKWTQEGLTQAVEAILNRNLFVRQASIEYGVPRKTLERRFKTQDFTKGPMGPSSVFGTDHEKRLVRHILKMQDNCFPLTPKDLRSIAFNFAEQLGLKHTFNKEKEEAGYVWLQSFLKRNPEIKIRKAEGVSLARCEALNRDEVNAYYDILFSLLEEYELFEKPSHIFNMDESGLQLNNRPGHVLAKKGSKAVSTVTSTEKGETITVIGCCNAEGIFLPPACIMKGKNKKQKWQDGMPPGSVLFMSQKSAYINATIFFEWLKTHFLPRKAAGKVLLCLDGHTSHCNSVEILEFAAANDIILFTLPSHTTHYLQTLDRSVFKSLKAFYYEACRMWLKRNPGRRLTRLQFAPCSPKSATYENATAGFKATGIYPFNRYAVPDHAFATTNMQTDESQRHRPSSATVTRRTSSPSVLQVGPDQFSTSEIHTLQRCSSPCLPSVKPSHSSSSGNKAPLNPAFNPNQPDLSRIQAPSRDSTPSLPDYVETIEHGPPEMQTLRNICTTLPHEVQSIEPGPSYILALKNNRNSVLSPAQKNNNQSVESVIQQTPASKENEEETPSKFLTEISPISLKTYQVRSRAKQVAKILTSETHINYRKECEEKKNDKQVRSNNNVRKRKIKQEKTIGKESNEKNWKRNRRGKEKEDEPVQKKTKQKKNNMNKRQKINKRQESTDTEDDDEPILLESGDSSPVSSLIDDCVGCGDNYYTTELTEEWIQCVICKRWAHENCTEYDDKCHPCGNKIKIDARKRKGKGKKTKSAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00923569; iTF_00178003; iTF_00923541; iTF_00026777; iTF_00026775; iTF_00026776; iTF_00178006;
- 90% Identity
- iTF_00923569;
- 80% Identity
- -