Lfer004972.1
Basic Information
- Insect
- Luffia ferchaultella
- Gene Symbol
- Jarid2
- Assembly
- GCA_949709985.1
- Location
- OX453243.1:19779867-19804277[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-22 1.4e-18 67.8 0.3 6 89 380 460 376 460 0.93
Sequence Information
- Coding Sequence
- ATGGCAAAACTGAAAAGaAGAGTTCAAGCACAAAGAAAATTTGCCCAGGGAGCCTATATCCCTCCATCAAGCAGTGAACGCCGCACAGATGTGACACCCATCAAAGAAAATGGGGAATATAGGAAGCCCATTCTGAacactatattaaaaaatgtgtcTGCTGTGCATCTCTTAGACATTGTTTCTTTTCAAAATATCCATCCACACAAACATCCTATAGTACTTCTAGAAAAATGGGATGACAAACTATCTATATCTGATAGAGTATCAGAAAAGGAAATTGAAACTCAAATTGTAGAGGTCATCCAACCTAAACCCGCAACTGCAGTGGAAAGCACAGTAAATGCTAAACCTAAACCagttaacaaatatataaaattaaagcaGAAACCAATCAAggctttaaataaaaacaacatgAGACTGAGATCAAGAATCATAAACACAATCTTAAGAGATGAGCCAAATAAAAGCAATAATCCAGAGACTGAATCTGTGGCTTTAGTAGATGATGTATACAACTTTGACACTGAGAAAGACACTCCTAAAGCGAATCAGCCATTCACTGAATTCAGACACACTCGACGTAAGAGTATTCATAATGATTCGCATAATGATGAGAAACACTATCTTTACTTAGATTTGCTTCCATCAAATAGTTCTCATGTGATACAGTTACTAACAGTTAAAGTGCCTCATCAAAATAAACCAATAATGAGAGCCAGACTGATACCAAAGAGTGAAATAAGTCACACAAGCGATGATCCCCAAATTGATGAGGAAGTTGTAGTTTTAATGGGCCAAGGAAATTTCTTGGATCAATTGTTGAGTAGTTTGAATGCGGACACAAACGATATCAGAGCATTTGCTAAAAATTCTAAAGCAGCGAACATAAAACCACTAAAGGAAAATCAAAAAGGTTTCCCAAGAGCAAtaGTTATTGCTAATGCATATTTTCAGAACCCCTTGGTGTATATTGATAAAATTGGGGCTGAAGCATCGAAATATGGCCTATGTAAAATAGTTCCTCCTGAAGGTTTTAAACCTGACTGCTACATCAGAGATGACATAGTCTTCACTGCTGGTAACCAATATCCAGGTAAAATGTACACAAGATGGGGTCCGGCGACAAGAGAATTATGTgccataaaaaagtatttagctACTCAAAATGTCTGCTTCAAGAGACTTCCATTGATTGATGGTATTGAAGTAAATTTACCAAAACTGTATCATATAGTTCAAAAAGCTGGCGGATTAAAGGAGGTGattgaaaaaaagaaatggCAGAAATTAGCAGAAGACATGAATTTTCAGAAGAGTCAACATGTTGACAAGAAACTGGATCAAGtttatgtaaaatatcttttaccTTATGATGTTCTGACCAATAGAGAGAGACAGTCACTCTTGGCGACAGTGGAAAAAGGCTGGAGTAGgaagtataaaaaaatgctaGAGCGGGCGCGGAATCCATTGCATCGGCAGAAAAGAATCTTAGGAGAATCTTCCTCTGATGAAGAAGATGACGCAGAGGAAGAACAAGCACTGGACGAAGCCGATGATTGTGTTGTCCCTGGCCGTACCATGAATTTGACCACATTTAAAAAGgtagCCAGTAACTCGATGCAGATGTATTTCTCTCACAACAGTAAGCCCACCCCTCAAGAAGTAGAAGATGAATATTGGCGTCTGGTTTTGCTAGGCAATGACCACATATGCGTTAATACAGCTTCCATTGATACCGGAGAGCAAGGGTATGGTTTCTCAAAAGCTAAAGAAGACCCTTATTCAAAACACCCTTGGAATCTCAAGGCTTTAAGTAACAGTCCTGGTTGTGTGTTAAGGTCACTGGGACTGGTTTTGAGTGTAACAGTTCCAACATTGCACTTAGGAATGGTCTTCACAACTAGCTGTTGGCACAGAGATCCCCACGGGTTACCTTGGATTGAATATTTACATGCTGGGGCTCCTAAAATatgGTATGGCATACCAGATGAACAAAGCTCAAAATTTAGGAAAGCTGTTGAAAATTTAGGCCCAGCGTATTGCCAGAATAAGTCAATATGGTTACCCTCAGACATAACCATGATCCCGCCAAACCTTTTAATAGAACACAATGTGTCATTATCTAAAACTGTTCAACAGCCTGGCGAATATATCGTCATTTTTCCAAGAGCTTATAGTTGTTCAGTGTGTACTGGATTCACTATATCAGAGAGTGTCTACTTTGGATCTACAAGTTGGTTGATGACCGTGCAGAATGATTTTCAGgAGGTCCGAGACAGCTGTGAACCAACTATGTTTTCATTAGAACAACTTTTAATCGCTATGGCGTGCGATTCGAGAGTAGCACCCTCTGTATTGCTTCAAGTGCATAGCACTTTGAACATCATAATACAGgACGAGGCTTCAAATCGTCGACGTCTACAACAGTTGAAAATCGTGtgTAAAGTGAACAAGCAGCCACCAAAAAAGAAGTCAACTGCATGGAATGTAAGGGAACAGGCTGAATGTGAAATTTGTCGGACAACATTATATTTATCCAAAgtaACTGGAGTTACCGGCAAAAAGTCTGACTATTGTCTGCAACACGCTCTGCGTATACTTGAGATGTCGTGCAATAAGGACAGAGATCTCTCAGACGTAACTTTAGAATGTTTTTACTCCAACGAGGCCTTGGAAGCTGTGTTGGACCGACTACGTAAAAGACTGTGTCCCACTAGAGAGTAA
- Protein Sequence
- MAKLKRRVQAQRKFAQGAYIPPSSSERRTDVTPIKENGEYRKPILNTILKNVSAVHLLDIVSFQNIHPHKHPIVLLEKWDDKLSISDRVSEKEIETQIVEVIQPKPATAVESTVNAKPKPVNKYIKLKQKPIKALNKNNMRLRSRIINTILRDEPNKSNNPETESVALVDDVYNFDTEKDTPKANQPFTEFRHTRRKSIHNDSHNDEKHYLYLDLLPSNSSHVIQLLTVKVPHQNKPIMRARLIPKSEISHTSDDPQIDEEVVVLMGQGNFLDQLLSSLNADTNDIRAFAKNSKAANIKPLKENQKGFPRAIVIANAYFQNPLVYIDKIGAEASKYGLCKIVPPEGFKPDCYIRDDIVFTAGNQYPGKMYTRWGPATRELCAIKKYLATQNVCFKRLPLIDGIEVNLPKLYHIVQKAGGLKEVIEKKKWQKLAEDMNFQKSQHVDKKLDQVYVKYLLPYDVLTNRERQSLLATVEKGWSRKYKKMLERARNPLHRQKRILGESSSDEEDDAEEEQALDEADDCVVPGRTMNLTTFKKVASNSMQMYFSHNSKPTPQEVEDEYWRLVLLGNDHICVNTASIDTGEQGYGFSKAKEDPYSKHPWNLKALSNSPGCVLRSLGLVLSVTVPTLHLGMVFTTSCWHRDPHGLPWIEYLHAGAPKIWYGIPDEQSSKFRKAVENLGPAYCQNKSIWLPSDITMIPPNLLIEHNVSLSKTVQQPGEYIVIFPRAYSCSVCTGFTISESVYFGSTSWLMTVQNDFQEVRDSCEPTMFSLEQLLIAMACDSRVAPSVLLQVHSTLNIIIQDEASNRRRLQQLKIVCKVNKQPPKKKSTAWNVREQAECEICRTTLYLSKVTGVTGKKSDYCLQHALRILEMSCNKDRDLSDVTLECFYSNEALEAVLDRLRKRLCPTRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -