Basic Information

Gene Symbol
XBP1
Assembly
GCA_949709985.1
Location
OX453244.1:4019153-4020846[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.1e-17 9.3e-14 52.0 13.0 2 63 40 101 40 103 0.93
2 2 0.002 3.1 8.7 0.1 33 59 85 111 85 114 0.89

Sequence Information

Coding Sequence
ATGAGCGCTCCGATCATAATCACTTTGCCCAACAACTACCTGATGGAGGCGGGCGATTCCATGGTGGACATCGCGCCTGCACCCACCCGTAAGCGCAGGCTGGATCATTTATCATGGGAAGAGAAAATGCAACGGAAAAAACTGAAAAATCGTGTCGCGGCGCAGACATCGCGTGATCGCAAGAAAGCCAAGATGGACGCAATGGAGTATCGGATTGAACAACTGGAAGCGGCAAAAGATCGGCTGAATGAGGAGGTGGCGAGCTTGCGTGCTCTGAATGAGCGTCTGATCAGCGAGAACGCAGCACTTCGTAGCAGTACAGCGGCGGCGCGGGACGTCGCCGTGGGACCCATAGGACCGGCAGAGTCCCCTCGGCAGAAGGACGGGTCCCCGGCGGCGCTCCGCGCGGCACGCCTGCTGTTGGCGATGTGCCTGCTCTCACAGACCTCCTCGCCCATCTCGACTCCGAAGAGTGCCTCGATGCTTTACAACAGCTTGCCGATACACTCCTCGAAGAGATTGGTGCAGCTACTACAGGAGAGGCTGCAAATGTCTCAGTCGGGGACAGTCGCCAGTCTGCTGAAAGAGATCAAGTGGTGGGGCCCACAGCAGAGCACTTGGAACCCAGTGAAGGAGAGTTTAAGACCTATAGACATTAAAAAAGAACACATTCCTATCACTGAACTTAGTGATGGAGATAAAGGTGATGTTTTCTACACTAGTGTTGAAGAAGCTAATGACTTTGTGACAATAGAAGTGCCATGTGAGGAGCAAACATGCGTAGAAGAAATGAAACCTCTGCAGGTTGACACAGATTTTGATCTGGCGAACGAAATAGCTTTGGATGGTGAGATGAAACTGTTATCACCGATGAGTATGTCTCCACTGTCAGTGGAGGACCACATCCTGGCAGTGTCACCAGCACACACGTTTGCCTCTGATCTTGGCTACGAGTCTTTATCTTCACCATTTAGTGATCCAGAATCTTTAGACCTACCAGATTTTTGGTGTGATTCATTTTCAGAACTGTTTCCTGGTTTAGTATAA
Protein Sequence
MSAPIIITLPNNYLMEAGDSMVDIAPAPTRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDAMEYRIEQLEAAKDRLNEEVASLRALNERLISENAALRSSTAAARDVAVGPIGPAESPRQKDGSPAALRAARLLLAMCLLSQTSSPISTPKSASMLYNSLPIHSSKRLVQLLQERLQMSQSGTVASLLKEIKWWGPQQSTWNPVKESLRPIDIKKEHIPITELSDGDKGDVFYTSVEEANDFVTIEVPCEEQTCVEEMKPLQVDTDFDLANEIALDGEMKLLSPMSMSPLSVEDHILAVSPAHTFASDLGYESLSSPFSDPESLDLPDFWCDSFSELFPGLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-