Lchi020067.1
Basic Information
- Insect
- Luehdorfia chinensis
- Gene Symbol
- pnr
- Assembly
- GCA_029286615.1
- Location
- JAGSMQ010000267.1:238274-249367[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.2e-18 3.3e-14 52.8 3.0 1 35 424 457 424 458 0.98
Sequence Information
- Coding Sequence
- ATGAACGGACGCGAGGTATTGAGCATAACGGCGGACAAGCTAGAGGAGATTATCAAACCCATAAACGAGACTGATTACGAGCATGAGAGTAAACATAAATATGCCGAAGTCGGTTCACCGGACTCCACGGAGGAGATGAAGAATTTGGAAAGCAGGCAGGCGGCGGTGACGCTGCTCCAAATAAAGAATTATGATCCCACAAAATACGTTGTAACGACTGAAGAAGGTCCACATATAATGTTTAACAATGTTCCCAGTTTACCTCCGTCTGATAGAGCGAGAGAGGTGATGCACTGTAATGCAGTAATCGATATAATAAGTAAAGCAGTTGCAGTCGCACAACGTGACAACGAAGAATCTCAGAGCTTCCCCCCGAACTATGCCAGTGTGATCGACAGGACGCACCCGGCCAGTGCCACAGAAGGAGGCTATTCCCACGAATATTCAGAAGACCAATATACATATAGCGCCACACAACCAGCTGCCAGTCCAAGTAGTAACGACGACCACGACAATAAGGAAATGGATCTCTCACTATATAGCTCTCTAAAAACAGAACCAGTCGATGAAAGTGAACAAGTCGAGCGCGAAGACGTGAAAGTTTACCTGCATCGAACAGTTGCGAACAGCAGGACCACAAACTTCGTTGAAGAGTACAAGCAGCATGTATTCGGTCGAACTGGTAGCAAAACAAAGCAGACAAAAGACAATTCCGTTTACGAAGAATGCAGCCAGAGCAGTAGCGGGTCGGATCCGGACAGATTACAAATGGACATATCGGAGATGTCACAGGACGATCCGGAGGAGACCCAGTCGGTGCCGTCAACTCAGTCGTCGCCGAAGCCTCCACATGAAGGTGAAAACGACAAAGAATCCTTGTGGCAGGCGCTTCATAAACAAAACGGTCGCGGCGGCGAGGCGACGCAGCTGCTTCGCAGGCTCATAAACAGCAAACACCTGGGCATGACTGTCTCTCCTCTACGAGCTGCCACTTCCCCCCTCCCTGCGAGTTTGCTACAGCCGCCCAATGGAGCCGTTTCACCGaacgGCGAGTGGTCGAGTTCTGGGCGGACCGGCAATACGGGCATACCGGGCGGCACTGCGCGAAGGAAGCAGAGCTTTCCGGCGCGAGCCCAGCCCGCTTGCGACCCGCCGCCCGCTGCCTGGCCGCACCCTGCCTCAGAGAACCAAGAGCCAGTGGACGCGTGCTCAGGGAACGTGGGCGGGGCGGGGGGCGGTGCCCGTAACACTGCGCGCGTGGAGTTGTCGTGCAGCAACTGCGGCACGCACACTACGACGATCTGGCGTCGCGATGCGCGCGGCGAGATGGTGTGCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACGGCCATGCGCCGCGACACAATACACACGCGCCGCCGTCGCCCGCGACACGACGGCAAGCACGCAAGGAACAAGTCGCGCCGCAACGGCGGTTCGTGCCCAGAAGCTGCTGAGAGCGGGGGCAACGCGgggggcgcgggcgcgggcgaGGCGGGCGAGGAGGCCGTGCTCGCCGCGCTGCGGAGGCAGCTGCAGCCGCACCTGCTCGCCGCGCTGCACGCGCACAACCCGCagccgcaccgcaccgcacagGTCGGTCCGAGTATGGCCGAGTACGACGAAGCACCGCTGAACCTCGCGAGTCACGTAGCCGCGGAGGAGACGCACTGA
- Protein Sequence
- MNGREVLSITADKLEEIIKPINETDYEHESKHKYAEVGSPDSTEEMKNLESRQAAVTLLQIKNYDPTKYVVTTEEGPHIMFNNVPSLPPSDRAREVMHCNAVIDIISKAVAVAQRDNEESQSFPPNYASVIDRTHPASATEGGYSHEYSEDQYTYSATQPAASPSSNDDHDNKEMDLSLYSSLKTEPVDESEQVEREDVKVYLHRTVANSRTTNFVEEYKQHVFGRTGSKTKQTKDNSVYEECSQSSSGSDPDRLQMDISEMSQDDPEETQSVPSTQSSPKPPHEGENDKESLWQALHKQNGRGGEATQLLRRLINSKHLGMTVSPLRAATSPLPASLLQPPNGAVSPNGEWSSSGRTGNTGIPGGTARRKQSFPARAQPACDPPPAAWPHPASENQEPVDACSGNVGGAGGGARNTARVELSCSNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDGKHARNKSRRNGGSCPEAAESGGNAGGAGAGEAGEEAVLAALRRQLQPHLLAALHAHNPQPHRTAQVGPSMAEYDEAPLNLASHVAAEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00840670;
- 90% Identity
- iTF_00204801;
- 80% Identity
- -