Lchi011680.1
Basic Information
- Insect
- Luehdorfia chinensis
- Gene Symbol
- Ncor1
- Assembly
- GCA_029286615.1
- Location
- JAGSMQ010000103.1:168384-198152[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-09 3.5e-06 27.7 0.0 1 43 421 463 421 465 0.97
Sequence Information
- Coding Sequence
- ATGTCCTGCGAAGCGCTAATTCGTACACAATGCCTCATGTATGTAGAAAGGTGGGTCAGGCCCGGGCAGTCGGATCACGGGCACGCGGGCGGCGCGCTGGCGTACGGCGGCAAGCCGGCGGCCGGCGTGGTGGCGGGCGTGCAGCAGCcgcgcgcgccgcccgccgcgccctaCGCGCAGCCCTACCAGCCCTCGCAGCTGCGCCTTCACAACCCCGGCTATGGCTCCGCTGCGCTCACATACAGGGACAACAGCTACGGGCGCGGCGGCGAGTAccgcggcggcggcgggcgcGTGTCGCTGCTGGGCGGCGCGTACCTGCCGCCGCCCGCGCCCCCCGCGCACCACCCCCCACCCGCCGACCCGCCGCCCTTCAAGAAGATCCGCCTCAGCGCCGAGCGACCCGCCACGCATCATCCCCAGCTGCGTGTCGACACACGGGAGCCGGTGTACAATATCGTGGAGGTGCTGTCACCGAACCCGCCTTCGGAGCCGACGGTAGAAGATCAGAGCTTCAGAACGACTAAAGATGACTTGCTTCAGCAAATATCTAAGGTGGACCGCGAGATGGCGCTGTCCGAGACGACGCTGCTGAAGCTAAAGAAGAAGGCGCAAGAGCTGGAGCAAACGGCCACGAAGCCCGCGCGCGCAGAGGAGCCCGAGGAGGCTCCGCCCCGACATCGCAGTCTCGCGCAGTGCATCTACGCTGACAACAGGAAGAAGGCGGCGTCAGCTCACTCTGCTCTGTCGCAGCTGGGCCCCGCCGTGCCGTACCCGCTGTACAACCAGCCGCAGGACACCGAGGTCTACCACGAGAACATCCGGAAGCACCGCGGCTTCCGGAAGCGCCTCGCAGAACACATACGCAGGATAAAGCTCGAGGCCGAGAAGCGCGAAGATGCGCTAGCGGAAGCGTATAGTAGAAGAGCAGCGGAGTGGATGCGCAGGGTCGAGAGGATAGAACAGGGACAGAAAAGGAAAGCAAAGGACGCCAGGAATCGGGAGTTCTTTGAGAAGGTGTTCCCGGAGCTTCGCAAGCAGCGCGAGGAGCGCGAGCGCTTCAACCGGCTCGGCGCGCGCGTCAAGTCGGAGGCCGAGCTCGAGGAGATCGCGGACGGACTGCACGAGCAGGAGCACGAGGACAAGAAGATGCGCTCGCTCACCGTGGTGCCGCCGCTGCTGCGAGAGCCGCGCCCGCCCACGCTCATGACCAACATGCGTTGCATGGATATGGAAGTGGAACACAAGGAGATACAGATGCGCAACGTGTGGACGCAAGCGGAGCGCGAGCTGTTCCGCGAGAAGTATCTGCAACACCCCAAGAACTTCGGACAGATTGCCTCCTTTCTGCCGAGGAAGAGCGTCCGGGATTGCGTTAGATTTTATTACCTATCGAAGAAGGCTGAAAACTACAAGCAGCTGCTGCGGAAGCCCCGGCAGCGGCGCTCCACCCGCAACCCGGCGCGCGCCGCGCCCGAGCCCGAGCTGCCCTCCGGCGTGCTGACGCGCCTGCAGCGCTCGCAGGGTGCGtactgcacacacacacacacacactgccTACGCCTGGATCTACTACTATACAAATACATACTATTCATACGGTCAACTATTACACTCTTACCCTACCTCCCTACATCTCTTCTTCGGACCTAA
- Protein Sequence
- MSCEALIRTQCLMYVERWVRPGQSDHGHAGGALAYGGKPAAGVVAGVQQPRAPPAAPYAQPYQPSQLRLHNPGYGSAALTYRDNSYGRGGEYRGGGGRVSLLGGAYLPPPAPPAHHPPPADPPPFKKIRLSAERPATHHPQLRVDTREPVYNIVEVLSPNPPSEPTVEDQSFRTTKDDLLQQISKVDREMALSETTLLKLKKKAQELEQTATKPARAEEPEEAPPRHRSLAQCIYADNRKKAASAHSALSQLGPAVPYPLYNQPQDTEVYHENIRKHRGFRKRLAEHIRRIKLEAEKREDALAEAYSRRAAEWMRRVERIEQGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLREPRPPTLMTNMRCMDMEVEHKEIQMRNVWTQAERELFREKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRQRRSTRNPARAAPEPELPSGVLTRLQRSQGAYCTHTHTHCLRLDLLLYKYILFIRSTITLLPYLPTSLLRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00840259; iTF_00197319; iTF_01141610;
- 90% Identity
- -
- 80% Identity
- -