Lchi013294.1
Basic Information
- Insect
- Luehdorfia chinensis
- Gene Symbol
- dnajc2
- Assembly
- GCA_029286615.1
- Location
- JAGSMQ010000127.1:1075975-1081831[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-06 0.0018 19.0 0.0 3 31 434 466 432 469 0.86 2 2 4.8e-14 7.2e-11 42.7 0.1 2 44 556 602 555 604 0.91
Sequence Information
- Coding Sequence
- ATGACTGACGCAGACGCTAAATGTAATAGCCGCGTGGTGGCAATTCCATggccatttttaaaaagaaaagtagaATGCGCAGGGGCGGCATTTCTCagatattataacataaaatgtCACGGGGAAGATACTCAGCTGCTAACGTTAACGTCAAAGGAAAATACTGAAGAAGTGATCTTCGATGACGATGTGGGATATCTACGAAGTTTGGATCCTAAAGAATGGAAAAAGCAAGATCATTATGCTGTTCTGGGTATGAAAGATTTGCGTTACAAAGCTACTGAAGATGATATTAAGAGAGCTTATCGTCAAAAAGTACTTAAGCATCACCCAGACAAGCGGAAGGCACAGGGTGAGGAGATTCGAAGCGATGATGACTATTTCACATGCATTACAAAAGCTTACGAGACACTTGGCACACCCAACAAACGGAAATCATATGACTCTATAGATCCAATGTTTGACGACTCTATACCAACATCagctgaaataaaaaaggatgGCTTCTTTAAAGCATTCACCAAGTACTTTGAAATGAATGCTCGGTGGTCAGAAAAGAGGAATACACCGTTATTGGGTGATGAAAATAGCACCCGTGAGTATGTTGAAAGGTTTTATGCTTTTTGGTATGAGTTTGACTCGTGGCGTGAATTCTCCTATTTGGATGAAGAGGAAAAAGAGAGGGGAGCAGATCGCGAGGAGAGGCGATGgatagaaaaacaaaacaaagcagCAAGAGCAAAGTTAAAGAAGGAGGAAATGTCAAGAATACGTAGTTTAATTGACTTAGCATATGCAAATGATCCACGAATCCAACGCTTTAAGCAGGAGGACAAGGACAAGAAATTGGCTGCCAAACGTGCCAAACagGATGCTGTTCAAGCTAAAAAGGCAGAAGAAGAGCGCTTAATGAAAGAAGCTCTACTCGCAAAACAAAAAGCGGACGAAGCAGAAAAGGCGCGTTTAGAAGCAGCAAGGGCTGAAAGAGAACAACTCAAAAAGAATTTACGTAAGGAACGCAAATCTCTTAGAGATTTATGCAAGTCCAACAACTACTACGCTCAAAATGAAAACGAAACCGTTGCGCACTTGGCGGCTGTCGAGAAGATCTGTGAATTGATGAAAGTTGTTGAGCTACAAGATTTTATGAAAGAGTTAGAAGCAAATGGCAGGGAAGCCTTCGTGAGAACTGTTAAAGAAACCGAAGATAAATTAGAAGCTGAACGAAAAGCATTGTTCGAAACAAAAAAGGTAGATGATCAGAAGACCAAAAAGAACGCCATTGTGAAAGCAACTGTTGAATGGACGCCAGAGTTAACGCAGCTTCTCATCAaggctgttaatttatttcCGGCGGGGACGAATCAGAGATGGGAAGTAGTCGCTAACTTCCTCAACCAACATGGATCATTTGTTGATGAAAAACGATTCAATGCTAAAGAGGTGCTTAACAAGGCTAAGGATTTGCAGAGCTCCGATTTCTCTAAAAGCTGCCTCAAGAAGGCGGCCAATGAAGAAGCATTTGACCAGTTCGAGAAAGACAAGAAGAAAGCCGTCAATAGTGTTGACGACAGCGGTATATCGAAAAGCGATCCTAAATTATGCAACGGCACTGCAAAGCCCAAAATAAATGGTGATGTTGGCAAGGAACCAGTAAAAGAAGAGAAACCATGGACGAAAACGGAACAAGAATTATTGGAACAAGCCATTAAGACATTCCCCGTGAGCACGCCAGAAAGATGGGACAAAATCGCCGACTGCATCCCGAATCGCACCAAAAAAGACTGCATGAAGAGATACAAGGAGTTAGTCGAGTTAGTTAAAGCTAAAAAACAAGCAGCTAATATCGCTTAG
- Protein Sequence
- MTDADAKCNSRVVAIPWPFLKRKVECAGAAFLRYYNIKCHGEDTQLLTLTSKENTEEVIFDDDVGYLRSLDPKEWKKQDHYAVLGMKDLRYKATEDDIKRAYRQKVLKHHPDKRKAQGEEIRSDDDYFTCITKAYETLGTPNKRKSYDSIDPMFDDSIPTSAEIKKDGFFKAFTKYFEMNARWSEKRNTPLLGDENSTREYVERFYAFWYEFDSWREFSYLDEEEKERGADREERRWIEKQNKAARAKLKKEEMSRIRSLIDLAYANDPRIQRFKQEDKDKKLAAKRAKQDAVQAKKAEEERLMKEALLAKQKADEAEKARLEAARAEREQLKKNLRKERKSLRDLCKSNNYYAQNENETVAHLAAVEKICELMKVVELQDFMKELEANGREAFVRTVKETEDKLEAERKALFETKKVDDQKTKKNAIVKATVEWTPELTQLLIKAVNLFPAGTNQRWEVVANFLNQHGSFVDEKRFNAKEVLNKAKDLQSSDFSKSCLKKAANEEAFDQFEKDKKKAVNSVDDSGISKSDPKLCNGTAKPKINGDVGKEPVKEEKPWTKTEQELLEQAIKTFPVSTPERWDKIADCIPNRTKKDCMKRYKELVELVKAKKQAANIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00195110;
- 90% Identity
- iTF_00204302;
- 80% Identity
- -