Lchi018327.1
Basic Information
- Insect
- Luehdorfia chinensis
- Gene Symbol
- kn
- Assembly
- GCA_029286615.1
- Location
- JAGSMQ010000216.1:820770-838450[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-46 1.3e-41 143.3 2.1 161 249 5 96 1 103 0.83 2 2 2.4e-32 3.5e-28 98.9 0.1 335 387 105 157 103 162 0.96
Sequence Information
- Coding Sequence
- ATGCGGGAACAGATGTGCGACGCCGCGGGCTCTGCGAGCACAAATACGTTCGCGgaaaataaaaatattatctttcatTGTTTCAGATTTTTTCTGAAGTTCTTTCTGAAGTGCAAtcaaaactgtttaaaaaatgcTGGCAATCCCCGAGACATGAGAAGATTTCAAGTGGTAATATCTACGCAAGTGATGGTTGATGGACCGCTGCTCGCGATATCAGACAACATGTTCGTGCACAACAACAGCAAGCACGGGCGGCGCGCTAAACGCCTGGACCCGTCTGAAGGTACTGACGCCGCGTCTGACAATAATTCAGCGCTCAACGAGCCTACCATAGACTACGGCTTTCAGAGGCTACAGAAACTTATACCGAGGCACCCGGGCGACCCAGAAAAACTGCCTAAGGAGATAATCTTGAAACGAGCTGCGGACCTTGCTGAGGCGCTGTACTCGATGCCACGCAACAACCAGCTGCTGCCGCGCTCGCCTCCGCCCTCCGCGCCGTTCAACTCGTACGCGCAGGACACCGCGCCGCACCAGTGGACCGACGGAATGGGCGGCCTGGTTTCGTCGCCGTTCAGCGTAAACCCGTTCTCGTTGCCAACCTGCAGCGCGCAGCAGTACGCACAGACCGCACCGCTCGCTTCCAAGTAA
- Protein Sequence
- MREQMCDAAGSASTNTFAENKNIIFHCFRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAASDNNSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLLPRSPPPSAPFNSYAQDTAPHQWTDGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00957691;
- 90% Identity
- iTF_00957691;
- 80% Identity
- iTF_00922640;