Lchi015534.1
Basic Information
- Insect
- Luehdorfia chinensis
- Gene Symbol
- -
- Assembly
- GCA_029286615.1
- Location
- JAGSMQ010000157.1:561047-571425[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-12 1.4e-08 35.6 0.0 3 89 198 271 196 271 0.89 2 2 4.3 1.4e+04 -2.8 0.0 29 66 404 437 400 446 0.69
Sequence Information
- Coding Sequence
- ATGACGCTCCTCGGACAGAAGGCTGAAGCTCTGCGAGTCTCGGGTGAGTACACGTGGTACTACTCGCTGCGGCTACCCAGTGGCCTCATCAAGCTCCACGGACAGATAGCCGAAGCTCTGCGAGTCTCGGGTGAGTACACGTGTTACTACTTGCTGCGGCGACCCAGTGGCCGAATGAAGCTCCTTGGACAGCGAGTCGAAGCTCTGCGAGTCTCGGGTGAGTACACGTGTTACTACTCGCTGCGGCTACCCAGTGGCCTCATCAAGCTCCACGGACAGCGAGCCGAAGCTCTGCGAGTCTCTGGTGAGTACACGTGGTACTACTCGCTGCGGGTACCCAGTGGCCGAATGAAGCTCCTCGGACAGCAAGCTGAAGCTCTGCGAGTCTCTGGTGAGTACACGTGGTACAGCTCGCTGCGGCTACCCAATGGCCGCATCAACCTCCTCGGACAGCGAGCCGAAGCTCTGCGAGTCTCGGCATTTACATTGCAGACCCCTCGTCGTTTGTCACTACGCAACGGCGCCCCCGAGAAACAGAGCGAGGAAGAGGAAGAAGACACCAAGAAGCTAGAAGGAGAGAACAAGGACGACAAGGAATTCCTGCAGGAACTGAGGCAGTTCTACAAGGGAAGGAATGAGAGTTTCAAGATGGCGCCAACGTTGAAGCACTTGTCCCTTCGCGCGTTGTACGCAGGCGTTGCGTCGCACGGCGGCTACGAAGCGGTCTGCCGCGGTCGGCTTTGGAGAGCTCTAAGCCCTGATCAACCAGCGAGAGCCAGGAGGCAGTATGAAAGGTTCCTGCTACCCTTCGAGAACCACGAGCGGAAAAACGGCTCGAAGACGTTCCAGAGGATCGGAAACGGTAGACTGGAAGAGCCGAAGACTATAGACACAATAGAGGTCCACGATTCGCCGCTGCGCGAAGTGGAGTGCCCGAGGGAGCTGCCCGAGAAGAGACTGAGAACTCCGTCACCCATGACAGTCAGCGAGTGCAGCGAGAAGGCCGAGAAGCTGGTCCTGGACAACGAAACGGGCGAAGTCACCAAGGAGGAGGCGGACGTGACCTCGAAGCCGGCCGAGGAGCTGAACCGCGAGTTCCTGGACTCTTTGCCGAAGGAGGAGAGGCCGTTGAAGATAACAGTCAAGCCGGCGGAGAAGCTGATAGAGAGCTACAAGCCGAGCGACTGCCGCGAGGAGGCGAGAGTTGGCGAAGCTTTGGACCTCAAGAGCTTGGACTGCAGTAAGGTGGAAACGGGCGGCCATGAAGGTGTGTTCCTCCATGAGTTGGCACAGAAATTGAACTTGGCGAGCGCAGACGCAGCGTTACTGCAGCAGCTGGCAGTTGGAGACAGGAGGACCCTCAATGGCCATCCGACACCCCTTAATCCGGTTCCTACGTCGCAGCCTGCACCAAATGACCCGCGGAGCACGTCCGCGGGGAAGTCCTCTCGACGTGAGGTGAAACGTACAGGCCTAGACTCGCTGCCACGCGTAAATCCTGACTCTGGTCGTAGTGTAGTCACCCACGTGAATCGCAAGTGTCACCAATCACCATCAGCTATGTGGGTTGTTCCAGCGCCGATCCCGTCGCTGCGAGCTGACTCCACGTCGACGTCGCCTCAGCCCGCGGCGCTCAACAACTTCGGCATACACCACCCCCCGCCCCCCAgcgcgccccccgcgccccccgcgcAGGCGCCCCCCGCGCACAGCGACGACGAGATCGTAGAGGTACCTTACAAACCAAAAACCCCAGAAATAATAGACTTGGATGAATACCCTGAAAGCCCACAAGCTATCAAGAAGAAGAAACTCGACATACTCAAGGAGCGAGGCCTCGAAGTGACAGCCGTCCCACCAGCCTGGCCCATGCAGCCGGTTCTCGCGAACCCCATAACACCACTAATAAACCCAGCCCCGATCATCCTCGACCCGGCCATGCAGCACCAAATAATGACCCAAGCCCATCTCTTTCAAATGTACAACATTATCTCTCCAAATGTACCCAATGGCGTCCAGCCCCCCAGAGTCATACAAGCGACCAGCATCTTCGGGTCCTCCGGGCCCGAGAAGACGGTCTACGGAAATCCAAAGGACCCTTTCATGCCACCACCGCACATCCTTCACGGGACCCCAGTCAAACCCCAGAGAAATATTCAAACCCCATCAACGCCACCGCAAGACATTCTCGACCTGACCTGCAAAGCCCAATCGCCGCAACAAAAGCCAGCGGTCGAAATAGTCAGGTTACCCTCGTCCCCACCAAAAACACCCACAGCTCAAAACCTATCGAAGAGCTACACCCTCCTCGACGGCAAGGCGGTGGTCGGGTCGAACTTGGAAATCACTCTAGTCAACCCAAAATCCCAAACGCCGCCCAAAAGACCGCCCCAGAAGCGATCATCCAACGGCAAATTTATGTCCGCGAAGACCCCTACACCCCCTAAAGACTACACCAAACCCTACCCACCCCCATCCCCGTCGGGGCTGCAGAAAAAGAATCCAATAGTCGTACCAAATTACCAAATAAATTCGACGCGAGACGACACGTCACCAAGCTCCACCGGCTCCAGAGACTCTCAAACGCTGCAGTGCAACCTCCCACCAACGCTCAAGGGTCAGAGCAGCCTCGCACAGATAATGGAAATGCAGAAGAGCGTCCCCAGCATAACCCCGTTCATGGACCCCGTGTACATGAGCGCCCTGTACAGCAGTCTGGGTCAGATGGACCAACGGCAGCTGGCAATGTACCGGGACTTCATGGCCAACCAGTTCAGGGGATACTCCGGACTCCTGAACATCGGCACGCCGACAACGAAGAATTAA
- Protein Sequence
- MTLLGQKAEALRVSGEYTWYYSLRLPSGLIKLHGQIAEALRVSGEYTCYYLLRRPSGRMKLLGQRVEALRVSGEYTCYYSLRLPSGLIKLHGQRAEALRVSGEYTWYYSLRVPSGRMKLLGQQAEALRVSGEYTWYSSLRLPNGRINLLGQRAEALRVSAFTLQTPRRLSLRNGAPEKQSEEEEEDTKKLEGENKDDKEFLQELRQFYKGRNESFKMAPTLKHLSLRALYAGVASHGGYEAVCRGRLWRALSPDQPARARRQYERFLLPFENHERKNGSKTFQRIGNGRLEEPKTIDTIEVHDSPLREVECPRELPEKRLRTPSPMTVSECSEKAEKLVLDNETGEVTKEEADVTSKPAEELNREFLDSLPKEERPLKITVKPAEKLIESYKPSDCREEARVGEALDLKSLDCSKVETGGHEGVFLHELAQKLNLASADAALLQQLAVGDRRTLNGHPTPLNPVPTSQPAPNDPRSTSAGKSSRREVKRTGLDSLPRVNPDSGRSVVTHVNRKCHQSPSAMWVVPAPIPSLRADSTSTSPQPAALNNFGIHHPPPPSAPPAPPAQAPPAHSDDEIVEVPYKPKTPEIIDLDEYPESPQAIKKKKLDILKERGLEVTAVPPAWPMQPVLANPITPLINPAPIILDPAMQHQIMTQAHLFQMYNIISPNVPNGVQPPRVIQATSIFGSSGPEKTVYGNPKDPFMPPPHILHGTPVKPQRNIQTPSTPPQDILDLTCKAQSPQQKPAVEIVRLPSSPPKTPTAQNLSKSYTLLDGKAVVGSNLEITLVNPKSQTPPKRPPQKRSSNGKFMSAKTPTPPKDYTKPYPPPSPSGLQKKNPIVVPNYQINSTRDDTSPSSTGSRDSQTLQCNLPPTLKGQSSLAQIMEMQKSVPSITPFMDPVYMSALYSSLGQMDQRQLAMYRDFMANQFRGYSGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -