Lchi002478.1
Basic Information
- Insect
- Luehdorfia chinensis
- Gene Symbol
- Kdm5
- Assembly
- GCA_029286615.1
- Location
- JAGSMQ010000014.1:1057276-1099293[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-24 5e-21 75.6 0.0 2 89 101 184 100 184 0.93 2 2 6.4 2e+04 -3.3 0.0 45 67 1416 1441 1404 1457 0.66
Sequence Information
- Coding Sequence
- ATGGGAAAATGTGACGAAGCTAATGTCGAAGTCAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTCACCTTCACTGTACCTCCGGAGGCACCTGTCTTCGAGCCTACGCCTGAAGAGTTCCTGGACCCACTGGCGTACATTAGTAAAATAAGGCCAATCGCCGAGAAGTCTGGGATTTGTAAGATCAAACCCCCCGCACATTGGCAACCACCTTTTGCTGTGGACGTAGATAGACTACGGTTTACACCTAGAATACAACGATTGAATGAGTTGGAGgCAATAACTCGCGTGAAGCTGAACTTCTTGGACCAGATCATCAAATTCTGGGAGCTGCAAGGCTCATTGTTCAAGATACCAACAGTAGAACGGAAGCCGCTGGATTTATATGCGCTGCATAAAATTGTTAAGGAAGCagGTGGTTTCGAGGTATGTTCAGCGGAGCGCAAATGGTCGAAGATCGCGAGGCGCATGGGCCATCCTCAGGGCAAGGGCATCGGTTCCATCCTGAAGAGTCATTATGAACGCATACTGTACCCATATGACGTGTTCAAGAGCAGCGGGGCCGTGGGCGATAGCAAGGAAACTAAGATCGAAGTAAAGACGGAGCAAACACCAGAAAAGACTACCGCCGCGACACGCAGCCGTTCGGCAAGCAAGTGCCCGCCGGCCGCAGCGACTCCGCCCCCCGCGCGCCGCTACAAGAGCTCGGAGCCCGAGCCGGAGGCCGAGGGCAGCCATACCGAGGGCGCCCTCCCCGGCGCTGAGGAGGAGAGAAAATTACGGACACCGATTAAGGAGGAGAATGCTGAAACTAGGAGGAGTCCCCGCGAGAACAAGTGGATGTCGGGCGCGGGCAGCTGCGGCGTGGTGCGCTCGCGCCGCCTGCGGGAGCACCGCCTCAGCAACATGACCGTCTCCGTcacgcccgcgcccgcgccgccgcccgcgctGCACAACCCCGACGACCCGGTACCTACGCACGCACCctgcgcacacgcacacgcacacgaaTATGTGCACGCAGTACACGCATACGCACGCGCTCACCGACGCATGGACACGCACTTACACGCACGCGCATACGCATGTATGAGTGTGTACTTACACACTCACGTACACGCACACACGTACACGTTCACGCATACGTGCAGGCACGTACACGCATACGCACACGCTCACGGACGCActcacacgcacgcacacacacgctcACGCGTGAGTGAACATACGCACTCACGTGCACTCACGCACGTACACGCTCACGCATACGTGCACGCTCTTACGCGCATACGCACATACGCACGCACGCATAAACACGCACGTACACGTTCACACGTACGTAAATGCACGTATACGCACACACCAGACACGCACCTTGCTAAATACATGTGCCACGTGTGCGGACGTGGCGATGTGGAGGAGCAGATGCTGCTGTGCGACGGCTGCGATGACTCCTACCACACCTTCTGCCTCGTGCCACCTCTGGCCGATGTGCCGAAAGGCGATTGGCGATGCCCCGTTTGCCTAGCAGAGGAGGTGTCGAAGCCTGCCGAAGCGTTCGGTTTCGAACAGGCGTCCCGTGAATACACTTTGCAGCAGTTTGGCGAGATGGCCGATCAATTCAAGTCTGATTACTTCAATATGCCCGTTCACATGGTACCAACATCAACAGTAGAACGCGAGTTCTGGCGCGTAGTGTCCTCTATTGATGAAGACGTCACAGTCGAGTACGGAGCGGACCTCCATTCAATGGACCATGGATCTGGTTTTCCTACCAAAATGAGTGCACACCTATACCCCGGCGAGCAACAGTATGCGGAGTCAAGCTGGAATCTCAACAATCTGCCTGTACTGGAAGGGTCGGTGTTGGGGCATATCAATGCAGACATATCTGGAATGAAGGTCCCATGGCTGTATGTTGGTATGTGCTTCGCGACATTTTGCTGGCACAACGAGGACCACTGGAGCTATTCCATCAACTACCTGCACTGGGGCGAACCGAAGACCTGGTACGGCGTGCCCGGCTCCAAAGCTGAACAGTTCGAGGCGGCCATGAAAGCCGAGGCTCCGGAGCTGTTCCAGCTGCAGCCTGACTTGTTGCATCAGCTAGTCACAATCATGAACCCCAACATACTTATGAAGGCCGGAGTGCCAGTTTATAGGACTGACCAGCACGCAGGCGAGTTTGTGATCACATTCCCTCGCGCGTATCACGCTGGCTTCAATCAGGGATACAACTTTGCGGAGGCCGTCAACTTTACACCCGCCGATTGGCTGAAGATGGGCCGTGAGTGTATCGCGCACTACTCCACACTGCGGCGCTACTGCGTGTTCTCACACGACGAGCTCGTCTGCAAGATGGCCCTCGAGGCTGACTCGCTGAGCCTCACCGTGGCGCTGGCTGCCTACAGGGACATGAGGACGATGCTGCACGACGAGAGGAAGCTCAGGAAGGGATTGTTGGACTGGGGCGTGACGGAAGCGGAGCGGGAGGCGTTCGAGCTGCTGGCGGACGACGAGCGGCAGTGCCAGCTGTGCAAGACGACGTGCTTCCTGTCGTGCGTGACGTGCGCCTGCACGCCGCACGTGGCCTGCCTGCGTCACCACGCGCAGCTGTGCGCCTGCCCGCCCGCCGCGCACCGCCTCAGATACCGTTACACTCTAGACGAGCTACCAACGATGTTAGAAAAACTAAAGAAGAAGTCGGAACTGTTCCGCGAGTGGGCCGAAGCCGTACAGAACGCGTTGGATCCCGACACGCCCAAGACCTGCGACCTGGACGGGCTGCGAGCGCATTTACGACGGGCCCACGAACTTAAGATGCACAAAACTGAGCTGGTCCGAGCTCTAGAAATAGCAATAGAAGACGCCGAGAAGTGCGCTTCAGTGATCCAGCAGTTGGACTTGAACAAGATGCGAACCCGAACTCGCCACCACGACCCCAAGTACCGGCTCACAATCCACGAGCTCACCCTGTTCGCTGCCGAGATCGACAGCTTGGCTTGCGTGCTGCCCGAAGGTTCAGCAGTGAAAGAAGTATTAAGACAGACAGAGGAATTCGAAGATCGAGCTACTGACTTACTTAGCAAGGACTTGGAAGAAGTGGACGCTGCATCTGTAAGGGAGTTAGAGGAGGTTGTAGAACTGGGTTCCCGCCTGTGCATAGTGTTACCTCAACTGAGTGCGCTGCAAGCCAGGCTACAGCAAGCCCGTTGGCTGGACGAAGTCCGAACGCTACGTGAAGATTGTGCTGCACTAACGCCACCCGTGTTGGAAAGATTATTAAGGGACGCTGATTCAGTGTTGCCACATCGAAGGGTCGAACAGGAGAGGGCTGCATTATATAAGCTTAGAGCCCTAGTTGAAGAATGGGAGCAACGAGCCCAAGCGGTTCTTATCGACAACCGAGTTGAAGGGACAACTGAAGCTCAGCACACGAGTTTAGCAGAGCTGGACGCGCTGCTGGGCGACGGAGACGACATCGACGCGGCGCTGCCCTCGCACCACGCGCTGCACCAGGCCGTGGCCCACGCACGAGACTGGCTCGCCAAGGTTGAAGAGATGCAGTCGAAAGATCTGTATCCATATATGCACAGTGTCGAGACTCTGGTAAAACGCGGCCAGCAAATACCTTTGGCTCTGTTCGAAAAGGACCAGTTGGCAGCTGCACTGCAGTCTGCAAGAGAGTGGAAGAGGGGAGCAGCCGATATGTTCCTTAAAAAGAACTGGCCGTACAGCCTCCTCGAAGCACTGTCGCCTCGCTCCGAGCACACGGCGGCCGCAGCGAGGAAACGGCCGCGGGACGGCGCTGCCGCGGAAGCGGGCGCTCTGCTGCAGCACTTCAGCGAAGACGCCACGCCTACCGAGATTGTGGCAGCGTTTAAACAGGCTGAGCACAAAGAGCTCGCTGCCATAAAGGAGCTTAGGGCTCGTAACATACGTAAAGAGGTACGCGCTGCTCCTGCGGCCGGTGTGACGTTCTGCCTGTGCCAAAAGCGACAGTATGGCGTTATGTCACAGTGCGAACTCTGCAAGGACTGGTTTCATGCTTCCTGTGTAGCATCAGCGAAAGAGGAACGCGAGGAGTCGCCGGATCGAGTGGAGTTGCCTTACCCGAGCACCGAACAAAAGTTCCTGTGCCCGGACTGCATGCGGACCAAGCGTCCCAGGTTACATCGCATACTTGCTTTACTGGTGTGGCTCCAGAAGCTACCAGTGCGGTTAGCTGAGGGCGAAGCTCTTCAGTGCGTGACAGAACGGGCCATGGCGTGGCAGGATTCTGCTAGAGCTTTGCTGGCAGCGCTCCCACACCATCAGCAACAGCCGGAGCATAGAAAGGACAGCATTTCACATGCCTCCAGGTCGTCTGCAAGTGTGGAACACGCGTACAGCGCGACGCCGAGGTCACCAAGCACAAGAGTCACGCCAGGATTATTACAAAAGTTAGAGATCTCATGCTAG
- Protein Sequence
- MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSLFKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKSHYERILYPYDVFKSSGAVGDSKETKIEVKTEQTPEKTTAATRSRSASKCPPAAATPPPARRYKSSEPEPEAEGSHTEGALPGAEEERKLRTPIKEENAETRRSPRENKWMSGAGSCGVVRSRRLREHRLSNMTVSVTPAPAPPPALHNPDDPVPTHAPCAHAHAHEYVHAVHAYARAHRRMDTHLHARAYACMSVYLHTHVHAHTYTFTHTCRHVHAYAHAHGRTHTHAHTRSRVSEHTHSRALTHVHAHAYVHALTRIRTYARTHKHARTRSHVRKCTYTHTPDTHLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKMSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLADDERQCQLCKTTCFLSCVTCACTPHVACLRHHAQLCACPPAAHRLRYRYTLDELPTMLEKLKKKSELFREWAEAVQNALDPDTPKTCDLDGLRAHLRRAHELKMHKTELVRALEIAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDSLACVLPEGSAVKEVLRQTEEFEDRATDLLSKDLEEVDAASVRELEEVVELGSRLCIVLPQLSALQARLQQARWLDEVRTLREDCAALTPPVLERLLRDADSVLPHRRVEQERAALYKLRALVEEWEQRAQAVLIDNRVEGTTEAQHTSLAELDALLGDGDDIDAALPSHHALHQAVAHARDWLAKVEEMQSKDLYPYMHSVETLVKRGQQIPLALFEKDQLAAALQSAREWKRGAADMFLKKNWPYSLLEALSPRSEHTAAAARKRPRDGAAAEAGALLQHFSEDATPTEIVAAFKQAEHKELAAIKELRARNIRKEVRAAPAAGVTFCLCQKRQYGVMSQCELCKDWFHASCVASAKEEREESPDRVELPYPSTEQKFLCPDCMRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDSARALLAALPHHQQQPEHRKDSISHASRSSASVEHAYSATPRSPSTRVTPGLLQKLEISC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158498; iTF_01153637;
- 90% Identity
- -
- 80% Identity
- -