Lser013284.1
Basic Information
- Insect
- Lucilia sericata
- Gene Symbol
- pnr
- Assembly
- GCA_015586225.1
- Location
- NW:177264-522839[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 2.3e+03 -2.0 0.1 15 24 320 328 319 329 0.80 2 2 1.4e-17 2.5e-14 52.3 3.1 1 35 554 587 554 588 0.98
Sequence Information
- Coding Sequence
- atgtgtAGTGTTCCACCAAAGTTTTTCCAAGTTTGTCGCCTTTGTCTAATGTTAATTGAGGAACATGATATATCAACACATCGAATTTATAGTACAACTAGTGTACCAAATGATTCTGTTAATGAATGTAAATGCAACAAAAATCTAGACAATGTTAAATGCTGCAATATAGTTCAGAAATGTAGCAGTTGTGATAAATAcggaaaaaatcaaaatttggaTGGCTCGATACCAACCATTCATTCGTCGCTACCGCGAGTGCCTTTATCACTTAACCCTTTGAAAACTTGTTCTTACAATATAAAATGCGATGAAGAATACTCAGATAATAAATTAGatatttgtaagaaaaataTACATGTAATTAATCAATCTTCTGGCATTACTGaTGATTCATCGGCGAACATTGCTTTACAAATATATAAGTGCCTGTCATTAGAAGTTTTGCCAACCGATGGTTTTCCTGCTTTAGTTTGTTGTAACTGTAAGTCATATTTACAAACGTTCTGGAACTTTAGAGAAATGGCTCATAAGACACACACAGCGCTAACTGATTTTTTAACACTCTGCAACTCTCCTGAAAAGAACTCTGCagatattaatatgtatttcaaCGACCTTTTATCTTCGGCAACATGCAACAAATCTTCATCTGAACAAATGGCAGCCAAGGCGCTAACGGAGTTGAGTGCATTCTCTAAGAATGATTCCCCTATAAAGAGAAAAtcaaaaaatgttaaatcaCCACTTGAAACACAAAAAAGCCCTCAAGAAGTTTTAAAACAAGAATACAGTTTTGCAGtagttaaaaaactaaattatcatTCTGAAAATAAGGAACCAACTTCGAATATAGACGATAATAATGAGAAAAGCCAATGTTTACAACAACAACTGGAAACCGCCGCTGTGCTTATGGATATAAGTAAAAAAGTGATAATATCACCACCCTGCTCGAATCCCCAATCTCCAAGACTATGTTCATCTATAGATTCTAGTATTTTAAATTCTGTGATAAAAGATAAACGTCCAGTAAATTCAGATATTGAAATGGATTTATCAAAAAAAGATTCCAGATGTGATTTAAGAAACTTCACGGATTTTTATTCGCAACAGGACAAATCAATAATATCCCAAGAAGATTGCTTGGAAAATCAAATTGTTAAAGAAACCAAATTGGAGAGAAAACTTGGCACAAATGCTTTTAGTTTTACTGAAAAATCTGGATTACCACACACAAATACTCACGCTGTCCCAAAGACGAAAATGTTGAATATAGAAACTGAAATTCGCTATGAACGTACGTCTCCTGATAGTCTAACATCGGAAGAACATGGCACTGATGCAGCTACCACACAGTTATGGCAAGCTTTAGCAAGATCAGCAGcgAATAATACTGAATCCAATCAAACAACTCAGCTTTTACATATACTAAATAGCTCATTTGCTTATCCAACTGCGTCTCCAACGCCTTCCgtggacgaaaaagtacctgaAGAACCCATAGCCCTATTAAAGATTGACGAcagcaaaatttttaagaagAAAGATGTGAATTCATATAACAGTAGACCCCGTTATGCTGCGGCTAATGTTGTTTTCCGGGACAAAAAGcCCAAAATATGTGCTTTTCAAACTGGATCTCAAAAAGATATGTCGTGTTCAAATTGCGGGACCTTGAAAACTACAATATGGAGGAGAAGCAATCGTGGCGAAATCGTTTGCAATGCATGTGGCTTGTACTTCAAATTACATGGTGTAAATAGACCGCACTCCATGAGAAGAGATACAATTCATAAAAGACGCCGGCGTCCAAGGGATTCTGAAAAACTAGACAGAAAAAATGAGTTCTAA
- Protein Sequence
- MCSVPPKFFQVCRLCLMLIEEHDISTHRIYSTTSVPNDSVNECKCNKNLDNVKCCNIVQKCSSCDKYGKNQNLDGSIPTIHSSLPRVPLSLNPLKTCSYNIKCDEEYSDNKLDICKKNIHVINQSSGITDDSSANIALQIYKCLSLEVLPTDGFPALVCCNCKSYLQTFWNFREMAHKTHTALTDFLTLCNSPEKNSADINMYFNDLLSSATCNKSSSEQMAAKALTELSAFSKNDSPIKRKSKNVKSPLETQKSPQEVLKQEYSFAVVKKLNYHSENKEPTSNIDDNNEKSQCLQQQLETAAVLMDISKKVIISPPCSNPQSPRLCSSIDSSILNSVIKDKRPVNSDIEMDLSKKDSRCDLRNFTDFYSQQDKSIISQEDCLENQIVKETKLERKLGTNAFSFTEKSGLPHTNTHAVPKTKMLNIETEIRYERTSPDSLTSEEHGTDAATTQLWQALARSAANNTESNQTTQLLHILNSSFAYPTASPTPSVDEKVPEEPIALLKIDDSKIFKKKDVNSYNSRPRYAAANVVFRDKKPKICAFQTGSQKDMSCSNCGTLKTTIWRRSNRGEIVCNACGLYFKLHGVNRPHSMRRDTIHKRRRRPRDSEKLDRKNEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -