Basic Information

Insect: Lucilia sericata
Gene Symbol: -
Assembly: GCA_015586225.1
Location: NW:122185-141718[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0036 0.17 12.1 0.4 1 21 1164 1184 1164 1188 0.92

2 8 5e-05 0.0023 18.0 1.3 1 23 1669 1692 1669 1692 0.97

3 8 7e-06 0.00033 20.6 3.4 3 23 1720 1740 1719 1740 0.98

4 8 0.00012 0.0058 16.7 0.8 1 23 1746 1768 1746 1768 0.99

5 8 3.2e-06 0.00015 21.7 0.7 1 23 1774 1796 1774 1796 0.99

6 8 0.0053 0.25 11.6 2.8 1 23 1802 1824 1802 1824 0.98

7 8 0.00016 0.0074 16.4 0.1 2 23 1831 1852 1830 1852 0.96

8 8 0.0034 0.16 12.2 1.3 1 23 1858 1881 1858 1881 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0036	0.17	12.1	0.4	1	21	1164	1184	1164	1188	0.92
2	8	5e-05	0.0023	18.0	1.3	1	23	1669	1692	1669	1692	0.97
3	8	7e-06	0.00033	20.6	3.4	3	23	1720	1740	1719	1740	0.98
4	8	0.00012	0.0058	16.7	0.8	1	23	1746	1768	1746	1768	0.99
5	8	3.2e-06	0.00015	21.7	0.7	1	23	1774	1796	1774	1796	0.99
6	8	0.0053	0.25	11.6	2.8	1	23	1802	1824	1802	1824	0.98
7	8	0.00016	0.0074	16.4	0.1	2	23	1831	1852	1830	1852	0.96
8	8	0.0034	0.16	12.2	1.3	1	23	1858	1881	1858	1881	0.97

Sequence Information

Coding Sequence: ATGGAAAGTGTTCTAATACAAAGTAATATAGATGATAGGCCTAATGATCATATAGAACATTTAAAATGTGGTGAAGTTTTTACTTGGCAATGTGCTGGAGAATCTTATGCGGTAGAATGTAAACTCTGTGACGATCATCCGTTATGTCCACTCTCAGAATTTCCACAACACATGGAGATATGGCATACAGATTGGCAGCAGGATCTTGAAATAGATAAGGAGCCTAACGAAGACCTTCACAATACAGATGACGATGATGAAGAAgatcaattttttaattatgaaGATCATAATGATGATCAAGCCTTATCATTTACCACTGAAGATAGTGGCTGTTTATTTGAGTCAGACgataattttcaacaaaatgaaaGAGTGTTAAACGTTGATCCAATAAACAACAAAGAAGAAATTCTAGAACCGTTTGAACAGGTATTAATAGAACAAGAAAACAACAATTGCCCTAATGAAGATTCTATACAAATTAGAGAAGATCTTAATGCCGCAGAAGAATGTTTAAACGAAGTAAACAAACAGGTAGCAGAGGTGTTAGCAGCTGTAACTGAGAGCGAGCAAAGgtcaaattttaatataaacaaaacattgaacgaaagaaaatgtaaacaaaaagatCTTGCTAATGAATTAGCAGAAAAAGAGAGAGACTATggaaatttaccaaaaataacAGAGAGTAAAAGAGAACTAAATGTAAAAGAAACAAATGTTGCAAAAGAAAATGATAATGTTGAGAAagtaacaaacaaatttaaaaattctagaagaattttaaagaatataaaagaaattgaagaaaatttaGAGGAATTAAGTGGAAATGAaacaagtgaagaaaaatatcAAGAATTTACGATTAACGAAATAAATCTAGGTGAAAATGAAACGgaaataacaaaatttgaaagtgaaacaaatgaaaatgaaacagatgttttaaaaaatttgcaaaaattacaaaattctttaaaaatttgtaagagAACTAGAAAATCTAAAAGAAATgtcaaagaaaataaagaatcAACGAATGAATtgaaagaaattaaagaaacaGCAATAGGAATAAGTGAAAATGAAACAAATGAACTCGGAAACATTGAGATTATAGAatctaaaagaaatttaaaagaaaatgtaacaaaaataaaaaatgttaaaaaaattagcaGAAAATCAAAGAAACCAATAGAAAATGACGCCGGAATTAGTGAAAATGAAACAATTgttattgaaaactttaaaacaaatagaaaaactaaaaaatctttaaggaattttacagaaaatttaataaaccgaaaagatttaaaagaaaattacaaagaattaagaaaactaaGAGATTATGAAACAGaaacaattgaaaatgaaaCAGTAACAAGTGAAAATGAAacagaaaaaagtgaaaatggaaaaattaaaaaatgtataagaaattttaaagaaaatataagaaaatctagAGCTTTAGaggaattaaaagaaaaattaatagaaaCAAGTGAGAATGAAACAGCAATAAAAAATGAGggaaacaataaaaattctcaaaaaaattttaaagaaaattcaataaaatcaaaagatttcaaagaaaatgtaagaaaactCACAAACTCGCATAAACTAATAGAAAATGAAACAGAAACAAGTGAAATTGAAACAGTAATAAGTGAAAATGATACAATAACTAGTGAAAATGAAAGCGAAACTTCAACTAAAGCAAATGATCTCAAATACAGTACAAATTCtaacaaattaacatttttcgataattcctttaaaaatactcaagataattttaaaaatatacgaaatttttctataaatttaagaaaaaatttgaaatatttacaagAATTACAAGAAAAGAAAGCAAAACCAAGaagaaaccataaaaaattCGAAGAAATCGGACATAGTACAAGATACAAGAGAAAACTTATAGGAAATCAAGAGAAATTAAGAAAAGAGGAACGACACGAATTGAAACAGGTGGAATCTATTAGCAGAGACAGAaatgaaagagaatttttacaaaaatttacaaaattagataaaattacacaaaatgtaACACAAAAATCTTGCAAAACTAGATCGAGcaaaagaaatttaagaaattgttCCAGAGAGTTTTCAGAAGAGGAACAAGGAGAAAGAGGATTACGTGATTTGTATAAGAAAGTAATTAAGCTTCAAGAgagttttgaaaattatacaaaatcttCCCGATTTCCGAAAACAAATGTCACAAGAACTAGAAAatctaaaatgaaattaaaccaCGAGCAACTGTTCACGCAAAGTGATTTGAGTATTGAAGAGAGTAGTTCAGATTGTTCTAGAGAAACTaagagaaaacttcaaaattatgaAAGTGAATTAGAGGAGTTAGATTTAAGTTCCTTTGAAGCTCTAAAACAAACTAAGGAGCCGCTTAAAAAACCCACCAGACATGGATACCGATCAAGTAAAAGAAGACTAACAACATTAAATGAAGATCTTACGCCCAACAAGAGAACAAGAAGAGAAAGTTCCAGCGAAACATCTGACATTTCAGAGGAGATATCTTCTAACAACTCTGTAAAGGAAGGAGTTAATAAAACTGCAAAACAGACTTTGGTAACCCAATTTTTTAagaatgaaaatgttaaaactaaAGTTTCAGTTAGTCCTACTTCCATGGATATAACCGACACCTGCTCTCTTAATTCCTTTAATTCTTCACCAGACTACGCTTCCAGTAAAGACAACTCTTCGCCTACACCCTTGTCTCCTTTCTCCCCCAAAACTGAGGACGAACATTTTGAATTCTGTGGACCCAAGAGAGAGCAACTAAACAAACATCATATTGAACATTTAATCAAACTCTATCAGGAACATCCCCGCCTCTGGGAACAAGCCCATCCGGAATTCTGTGAACCTGAACTTTGTCGCAAATCCTGGCAACAGATCACCGATCAATGGAATGCAATTTGTCAACGTAAATTCACAACTGCTGAAGTACGCATACGTTTGGGCACTCTTTGTCAAAGATATGTACAAGAAAGAGAACGTCTTGCTTTAGAGGGAGAACTAGATGAGTTTACCAAATTCCCCCACTATGAACAAATGCAATTCCTGGAGCAGCAAGAGTCTCTGCAAAAGAGAACTGAGTTGCTGGAGCAACAAAATGAGAAGatcttgaaaatttatcaaCTATTTCCTCTACTCTGGCACATCAACTCTTATAAAGTGCGCCAAAGCAAAGAGCGAGCCGAGGCTTTTGAGAACATTAGCCAGTCTTTGAAATTATCAGGTTTACACTTATCCTCCCAGGCGGTTCAGAAACGCATACGTTCTCTTAGGAAATGTTATCGTTTAGAGAAAATACGCTTCCTTAATGCTCAAGTAGAGCAAACACCCTTCGAGTCCAACTTTTGCCATTATGAgagaatgaaatttttacacCAGCACATCGAACCTTTTAGGTGTCGCATATGTGGTAGAATATTTGAGAATTTATCACGATTCCGTGAGCATTTGGAAGAGGAAAATCATGGTGATGTACTGCAGGAGGACTGTGAAAGTGAGCGGGAAGACGATGAGAAGGAAAAAGACAAGATTGTAAAAAATTTGGGGGATATATTAGAATCAGAAAATTCTCCTGCTTCGTTGGAATTAGAAATTTCTTCAGATGTTTTACAAACTTTTACTCCCCTGTCCACTAGCCCATTACCTAATGAGGAACCTGTCACTACTGTAAACCTGGATACTGCACCCACAATCCAGGAAGTTATTATATTTCCTCCGCCCACCCCCGCCGCATCCTTTGTAGATTCTTTAAATCTGGAAAATCAACTCATGGAGGAAATAATGGAAAATGTTAGCAATGAGAgtagtttttctcaaaaatcttTGGATCAGtACATAAACTCGGTTACCAATTCAGAAGAGTTGAGTTCAAATGGTGATAACATAGAAGAAACTATATCTTCTGAAGTAATGGATATTGCAATAGAGGATTTAAGcgataataatattataatcaTGGAACCTATAGCCTCTGATATTTTTGAAGTAGGAAATCCTATAGTTTGCAATGAAACCTTGAAGGTAAAAGATCAATCTTTTGAGGTTTCCAGTACAGTAACAAATGCTGAAGAAATGTTATCAGGATCTCAGGAAATACAGCTAGAATCCACGGAAACTTCCTCCTTACCCTCTCCCCTAGTGGTTAATGTTCCATGTAATGACTTTTCTCTCGATCTCAACTTAAACTCACCGCCTTACGAAATTCTCAATCCAAACTCCAACGATTCTGATAATGAGCTGCACTCCTCAGGGGATATATCCACCCTACCCCTGCCCGATCAGGAAATCCGTAAAATGATTGCTTTATATCGTAAATATCCTCAGATTTGGAATCCAAATCATTTGGATTATAATTCACGTAACCTAAGACGTCAGGCCTGGTGTCAACTTACTAAAGAATTTAGCGTAGCAGTGGGTAAACAGTTCTCTTGGCGTACTTTGCATCGCAAGTTGACGGATTATGCCAAATACTATAAGAAATTGATAACGGAACAGGAGAACTATGAGGAATTGGAGAATAAGTGGGCTTTCTATGAGGATTTCAAGTTTTTGGATGATGTGCTCGTTGTCCATGACGAACTACAGCGCAGTGTCCATCATCGtgataacaatttcaaaatcattaaaatctaCGAAACCCTACCCCAACTGTGGAACATAAAACATCCCGATTATAGTAAACGTTCCAGCAAACAGCGGCTCATCGAACTAATGTGCAATCGTTTGCAAGAGGAATACAATCTCCAACTGACAACAGAACGTTTAAAAAATCGTCTTATAGAACTACGGGCCCAGTATAGAACAGCGAAAAAGCAACGCTTGAAATGTGAAAAGAATCAACAAACTTTTACAACCGATTTGGAGTTTTATGAAGCTTTCAAGTTTCTCGATCCCCACATAGATCCCTTTATATGTGAGAAATGCGGaaaggaatttaaaaaattaaccgATTATAATCAGCACATAAAGAGGGAACATGAAAAGTCAATTAAAGAGAAACCAGCTCCTCTAACCCTGTTACCTCTGGAACCGGGTGtagataaaaatttacaaaatatttgccACATCTGCGGCATTAAGTTTAGTACCCGCAGTAATCTAGTGCATCATGTTAGACGTCATGAGGGCGTACGCAACTATGAATGTCCCATGTGTCCGAAGAAGTTTTTTGCCTCCCATCCACTCAAAGTGCATATTAGGTCCCACACCAAAGAATGCCCTTATACTTGTGAAAAATGTGGCATGTCTTTTGTTAGTGCTAGTAAACTGAATCAACATGTTAAGAGACATTTAGATCGAAAAGACTATCAATGTGATTATTGTCCTAAACGATTTTTTACGGGCTTTGAAAAGAACCGCCACGAAAGGAGACATTTAAATATTAGAGATAAAGTGTGTCCCATTTGTGGAAAAACATTTGTAGTGGGTTCTTCGTATTATGCTCACATGATGCTGCACAATGATACGAAACGTTTTGAATGTGGGAtttgtaaaatgaaatttgCCCAATATGCGGGTCTgtataaacataaaaagaaatatcatCCGACGTAA
Protein Sequence: MESVLIQSNIDDRPNDHIEHLKCGEVFTWQCAGESYAVECKLCDDHPLCPLSEFPQHMEIWHTDWQQDLEIDKEPNEDLHNTDDDDEEDQFFNYEDHNDDQALSFTTEDSGCLFESDDNFQQNERVLNVDPINNKEEILEPFEQVLIEQENNNCPNEDSIQIREDLNAAEECLNEVNKQVAEVLAAVTESEQRSNFNINKTLNERKCKQKDLANELAEKERDYGNLPKITESKRELNVKETNVAKENDNVEKVTNKFKNSRRILKNIKEIEENLEELSGNETSEEKYQEFTINEINLGENETEITKFESETNENETDVLKNLQKLQNSLKICKRTRKSKRNVKENKESTNELKEIKETAIGISENETNELGNIEIIESKRNLKENVTKIKNVKKISRKSKKPIENDAGISENETIVIENFKTNRKTKKSLRNFTENLINRKDLKENYKELRKLRDYETETIENETVTSENETEKSENGKIKKCIRNFKENIRKSRALEELKEKLIETSENETAIKNEGNNKNSQKNFKENSIKSKDFKENVRKLTNSHKLIENETETSEIETVISENDTITSENESETSTKANDLKYSTNSNKLTFFDNSFKNTQDNFKNIRNFSINLRKNLKYLQELQEKKAKPRRNHKKFEEIGHSTRYKRKLIGNQEKLRKEERHELKQVESISRDRNEREFLQKFTKLDKITQNVTQKSCKTRSSKRNLRNCSREFSEEEQGERGLRDLYKKVIKLQESFENYTKSSRFPKTNVTRTRKSKMKLNHEQLFTQSDLSIEESSSDCSRETKRKLQNYESELEELDLSSFEALKQTKEPLKKPTRHGYRSSKRRLTTLNEDLTPNKRTRRESSSETSDISEEISSNNSVKEGVNKTAKQTLVTQFFKNENVKTKVSVSPTSMDITDTCSLNSFNSSPDYASSKDNSSPTPLSPFSPKTEDEHFEFCGPKREQLNKHHIEHLIKLYQEHPRLWEQAHPEFCEPELCRKSWQQITDQWNAICQRKFTTAEVRIRLGTLCQRYVQERERLALEGELDEFTKFPHYEQMQFLEQQESLQKRTELLEQQNEKILKIYQLFPLLWHINSYKVRQSKERAEAFENISQSLKLSGLHLSSQAVQKRIRSLRKCYRLEKIRFLNAQVEQTPFESNFCHYERMKFLHQHIEPFRCRICGRIFENLSRFREHLEEENHGDVLQEDCESEREDDEKEKDKIVKNLGDILESENSPASLELEISSDVLQTFTPLSTSPLPNEEPVTTVNLDTAPTIQEVIIFPPPTPAASFVDSLNLENQLMEEIMENVSNESSFSQKSLDQYINSVTNSEELSSNGDNIEETISSEVMDIAIEDLSDNNIIIMEPIASDIFEVGNPIVCNETLKVKDQSFEVSSTVTNAEEMLSGSQEIQLESTETSSLPSPLVVNVPCNDFSLDLNLNSPPYEILNPNSNDSDNELHSSGDISTLPLPDQEIRKMIALYRKYPQIWNPNHLDYNSRNLRRQAWCQLTKEFSVAVGKQFSWRTLHRKLTDYAKYYKKLITEQENYEELENKWAFYEDFKFLDDVLVVHDELQRSVHHRDNNFKIIKIYETLPQLWNIKHPDYSKRSSKQRLIELMCNRLQEEYNLQLTTERLKNRLIELRAQYRTAKKQRLKCEKNQQTFTTDLEFYEAFKFLDPHIDPFICEKCGKEFKKLTDYNQHIKREHEKSIKEKPAPLTLLPLEPGVDKNLQNICHICGIKFSTRSNLVHHVRRHEGVRNYECPMCPKKFFASHPLKVHIRSHTKECPYTCEKCGMSFVSASKLNQHVKRHLDRKDYQCDYCPKRFFTGFEKNRHERRHLNIRDKVCPICGKTFVVGSSYYAHMMLHNDTKRFECGICKMKFAQYAGLYKHKKKYHPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -