Basic Information

Insect: Lucilia sericata
Gene Symbol: -
Assembly: GCA_015586225.1
Location: NW:11015-20486[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.5 1.2e+02 3.2 0.2 12 23 175 186 166 186 0.88

2 20 1 49 4.4 2.2 1 23 222 245 222 245 0.93

3 20 4.5e-05 0.0021 18.1 2.7 1 23 250 273 250 273 0.93

4 20 0.00049 0.023 14.9 1.7 1 23 279 302 279 302 0.97

5 20 0.0086 0.4 10.9 1.8 3 23 311 332 309 332 0.93

6 20 0.13 6 7.2 0.4 1 21 338 358 338 359 0.94

7 20 0.087 4.1 7.8 1.9 1 23 782 804 782 804 0.98

8 20 0.0018 0.084 13.1 1.5 1 23 810 833 810 833 0.96

9 20 6.3e-06 0.0003 20.8 1.1 1 23 838 861 838 861 0.91

10 20 6.2e-05 0.0029 17.7 0.7 1 23 867 890 867 890 0.97

11 20 0.058 2.7 8.3 2.8 2 23 898 920 897 920 0.95

12 20 0.011 0.52 10.6 0.6 1 21 926 946 926 947 0.94

13 20 1.6e-05 0.00074 19.5 0.6 2 23 1292 1313 1292 1313 0.97

14 20 0.00042 0.02 15.1 3.9 1 23 1319 1341 1319 1341 0.94

15 20 3.1e-05 0.0014 18.6 1.7 1 23 1347 1369 1347 1369 0.98

16 20 9.7 4.5e+02 1.3 6.4 1 23 1375 1398 1375 1398 0.95

17 20 0.00013 0.0062 16.6 1.6 1 23 1404 1426 1404 1426 0.98

18 20 2.1e-06 9.9e-05 22.3 3.8 1 23 1432 1454 1432 1454 0.98

19 20 5.9e-05 0.0027 17.7 1.7 1 23 1460 1482 1460 1482 0.98

20 20 6.1e-06 0.00029 20.8 0.2 1 23 1488 1510 1488 1510 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.5	1.2e+02	3.2	0.2	12	23	175	186	166	186	0.88
2	20	1	49	4.4	2.2	1	23	222	245	222	245	0.93
3	20	4.5e-05	0.0021	18.1	2.7	1	23	250	273	250	273	0.93
4	20	0.00049	0.023	14.9	1.7	1	23	279	302	279	302	0.97
5	20	0.0086	0.4	10.9	1.8	3	23	311	332	309	332	0.93
6	20	0.13	6	7.2	0.4	1	21	338	358	338	359	0.94
7	20	0.087	4.1	7.8	1.9	1	23	782	804	782	804	0.98
8	20	0.0018	0.084	13.1	1.5	1	23	810	833	810	833	0.96
9	20	6.3e-06	0.0003	20.8	1.1	1	23	838	861	838	861	0.91
10	20	6.2e-05	0.0029	17.7	0.7	1	23	867	890	867	890	0.97
11	20	0.058	2.7	8.3	2.8	2	23	898	920	897	920	0.95
12	20	0.011	0.52	10.6	0.6	1	21	926	946	926	947	0.94
13	20	1.6e-05	0.00074	19.5	0.6	2	23	1292	1313	1292	1313	0.97
14	20	0.00042	0.02	15.1	3.9	1	23	1319	1341	1319	1341	0.94
15	20	3.1e-05	0.0014	18.6	1.7	1	23	1347	1369	1347	1369	0.98
16	20	9.7	4.5e+02	1.3	6.4	1	23	1375	1398	1375	1398	0.95
17	20	0.00013	0.0062	16.6	1.6	1	23	1404	1426	1404	1426	0.98
18	20	2.1e-06	9.9e-05	22.3	3.8	1	23	1432	1454	1432	1454	0.98
19	20	5.9e-05	0.0027	17.7	1.7	1	23	1460	1482	1460	1482	0.98
20	20	6.1e-06	0.00029	20.8	0.2	1	23	1488	1510	1488	1510	0.98

Sequence Information

Coding Sequence: ATGAGTGAAACTGAATCCATAGTAGAAGACACCGAGTATATAGCCGTTGATGCTGCCGACTATGTGGTTTTGGCCGAAGGCGAAGAATTGGAACAGTGTGATGATGGTAGTGTTATTTTTCTGGCCGATGGCCAAGAGTTGATAGAAACAAGTGAAGTGGTAGAGGAACAAGATGATGATGCTACCATGATGATAACAGAGGATGGTCAGATGATGATGGTGGAGGAGGTGCATGAGATCATGGATGAGGAAAGTGGCGAGCAGCTGGAAGTGTATCAGCATGAAGAAGTAATAGAAGAACCGCCTACACCGCAGCAGTTGTGGGCAGAATtggaaaagaaaagaaagagaCTGAATTTGCCACGAGTACCGCGTAAGTTTATGCTGTTTGATGGTATTTGCGCGGAGATTGTAGACTACGATGATGAGGATAGTTCTCCCATAGTGGAATTTTCCATGGTGGCCGATGATCGTGAAGCGGAACGTTTGCCGGTGGAATGTGGCGTTTGCCCGGACATTATGCACAAATCTAAACTGGAGGCTCATTTAAAGACCCACCTCAAGCCGGGTACTAAACGCTATAAATGTATTTACTGTGAAGATGACTTCGTTACACGGGCCTATGCCGCCGGTCATGCTAGAAGGCATATGGGCATTAGGCCTTATGTTTGTGTACCTTGTAAAATGTACTATTGCACTAAACAGGATCTAAAAGTACATGAACAGCGTCGGCATTTAGCTAAGGAGCATATCTGCGAACAGTGTGGCAAAACATTTGCCCAAAATACTTCCTTAAGGCATCATCGTTTACTGGTGCACGAACAGCAGCGTAACTATGAGTGTGAACATTGTGGTAAAAAGTTTCTGCGTAAATATGCCATGACCGAACATGTACGCAATGTCCATTATGGTGATAGGAGACTGCTCGATTGTCCCTTCTGTGATTTACGCTTTAAGGATACCCATAAGCTGGCGCAACATCGCAAGGATATGCATTTGAATCAGGGTAAATTTGAATGTCGTGTTTGTGGTTTGGAATTTAATCACATCGACTTTTTTGATGCCCATCGTCGTTCTTTGCAATGTCGCAAAAAACTGGGACGTCATTTGTTCCAACAGAAACAGGATAATTATGATGAAATGGATttgcagcaacaacatcaaGATGATCAAACTATACTGCCCGATCAATTGCAGCAATACCACTATGAAGAACAATTGGATCAGGGGCAAATGTATCATCACAATCAGCAGCAGGTAGTGGTGGAGGGGGAGGAGGAGGACGATAACAGTCAACAACAGCTAGATCAACATCAGCTTCACAATCAGCAATTCAAACAAGAGCAATTAGAACAGCAAGAAGTGGTCGTAGAAGAGATCACCCATGATATGCACGATGAAATAGTAAATGAGCATGAGATAGAAGACCTAGAGGATCAGGAAAATATTGAGGTCGATGAACACGAAAAGGTTAAGGCGGAACAACAGCTTTTATACGAAATTGCCGCCATGGATAATGCTTATGTAAACAAAATGTGTGATACCGCCGAAGATATGGATGAATATATTGAATACGAATTTGCACGCGATTGTATAGAAATTGCAGATGATTGTGAGGAGGTAGACGATGGCGTAGCAGTGGACAATGATTTGTTAATACAACATCACACGGAACATTTGCCCGAAGAAACTTTTCTCTATGAAGAAGACGATGAGGAAGAGCAGCAGCtggaggaggaggaggatgaAATGCATGATTATGAAATTGTAGAAGAATTAGATGAAGATGTAGAACAACTATTAATATGTGATACGGCTTTAGACATTAAGGCAGAGGTATTAGAACCCACACAGCAGGAAGAGGAGGAAGAGGCgcaagaagaaacaaaaaatttcaaagaagAATTTATGGATCAAGAGGTAGAAGAGGATCATTTAATAGATGAAGATACCGCAAATGGTTTTGGTCCGGAGGAGGAATTTCAGGAAATAGAATATGAGGAAGTGGGTTTAGAGGAGGAGCAAGCTATTGATGTAGAAGAAAAACTTATAATACCGGATAAAAAGGAGGTAAAACAGGAAAAACCCAAAAAACCACCACCACAACCCTGTCCCGAGGATAAGGGACCCAAAGGAGTGGCTAGAAAGTATATGCTGTATGATGAACTAGTAGCCACTATAGTCGACTATGATCCAGATGGCACACCCATAGTAGAGTTCTCCGTATCAAATAATGAGGCTGATGAAAAGTTACCCATGGAATGTGGCATTTGTCCGGATGTTATGAGTAGAACAAAAATAACCGCCCATCTTAAGACACATCTAGTGCCGGGCACTAATCGTTATCAGTGCATTTATTGTGAGGAAACCTATAAAGATTGCAAATATCTGGCCGGACATGCCCGACGTCACATGGGTATACGCCCCTATGTGTGTGaattatgtaaattatatttttccacCAAACAGGACTTAAGGGTACACAACCAACGACGCCACCAGGAAAAAGACCACATTTGCGAGGTGTGTGGCAAAACATTTGCCCAAAATACTCAATTGAAACGGCATCGCGAGGCTACTCACGAAAAGAAACGGCGTTTCAAGTGTGACCTGTGTCCCAAGTCATATTACAAGAATTTCAGTCTGCAGGAACATATAAGGGCCGTGCACATGGGCAAACGACGTATTATTGTGTGTCCCTTTTGTGGCATGCAGTGTAGAGATGCCCACAAAATGGCCCGGCATCGCAAACAATATCATTTGCATCAGACGCACTTTGAGTGTCATATTTGTAATGAGGAATTTACCGATATCAATTATTTTGATGCTCACAAAAGATCTATACAATGTCGCAACAATACCCGCCGTAAACTAGAAGAAGAGggtcaacagcagcaacaggaAGAGGAACAGCAGCTTTTACAGCAGGCAGAAGAAGCCAAACAGGAGTTACTCATCGAAGATGATAGTAGTCAACAATATTCTCAACACTCCAACGAACATAACCTGCTACatacgcaacaacaacaacaacagccagAACAACACCTGCTTCATGGCCATGATGACGGTGAAGATGCTGATAATGCTTTAGAAACAttaaaacagaaatcgggcgaaaaaaaattcaatgtatttaattttcacaaaatgtctcccgtttttactaaaatattaatAGATTTTATTAATGAACACGAAAATATCGGTTATGATATATTATCGGAGTTACATAAATTCGATTTGTATATTAAGGGCTATAAACATCCCGCCTTTCCCTCGGATGCCTTAAATGAGGAGCCTATAGAATtggaatattataaaaaatcacttaataatGATAAAATTATAATGGATTATGCCCGCTACTCTTGGAACTCTCAGGGAGAAATGGTTTATAGTTGTCAAATTTGCGAGAAAATGAAGGTAACCACAAACAAAGATTTCACCGCCATGGATGACTTCTTATCGCATGTTGAGCATATGCATGGACCGAGCATTAAACAGGAACAGGAAGAACAAAGAATGGATAAGAAAACGGAAGAATTGTGGGTGGGAGAATTGGAGAGAATGAAAAAGACTGCTTATAAAAAACATAGTGAAGAGTTTCTCAAGGAAATCGATGAGaTCCTAGGCGTAGAAGATTTTGATGCCAATGGCATTTTGAATTCTTTAGAATCCCACAAAACTTCCGAACAAGATAATAATTCTGAAATTTTATCAGATTCCAGCAAAGAAAATGCCTTATCACCCTCTACCTCAACAACCAGCTCAACCGCCATCAGCTGCCCCACCCCAAAAATCTATAGTAAACCCTGCAAATTGTCTCAACAGGAACGGCAAAACAAACGGAAAAAGAAACGTACTTCGGGTCAATGTGACATCTGCAATCGTACCTTTAACGATCTCTACAATTTGCGTATACACAAAATGATCCATACGGGCGAAAAACCCTTCCAGTGTGAAGAGTGTGGTAAACGTTTTCGCCAGTACAATAAGCTAAAAATTCACTGTATTACGCATACCAATGAGAAACCCTTTAAATGTGATATCTGTGGTAAAGGTTTTCGTTTTCGCAATTATCTATCCGTACACAAACGTCTACATTCTGGGGAAAATCCctataaatgtaaattttgtgaagaatATTTTCATTCTCTACACTCAAGACGTTTGCATACGAAACTTATACACACAGAGGCGAAAACTTTTACCTGCTCGATTTGTGGCAAAATCTTAACGGCTCAATGTTATTTGACAGCTCATATGAAAAGGCATACGAATCAGCGAGACTTTAAATGTGACAATTGtggtaaatgtttttttagtcAATCACAACTTAAGGATCATCAATTGGTGCATACCAACCTAAAGCCGTTTGAGTGTAATGTTTGTCAGGCCCGTTTCCAGCGTAAATCGAATTATACACAACATTTGAAAATACATACGGGCGAGAAGTCGTATGTCTGCTCTATATGCAATAAATCTTTTGCCCAAAATGCCGGGCTATATGGTCATATGAAATCACATGCTAAATAA
Protein Sequence: MSETESIVEDTEYIAVDAADYVVLAEGEELEQCDDGSVIFLADGQELIETSEVVEEQDDDATMMITEDGQMMMVEEVHEIMDEESGEQLEVYQHEEVIEEPPTPQQLWAELEKKRKRLNLPRVPRKFMLFDGICAEIVDYDDEDSSPIVEFSMVADDREAERLPVECGVCPDIMHKSKLEAHLKTHLKPGTKRYKCIYCEDDFVTRAYAAGHARRHMGIRPYVCVPCKMYYCTKQDLKVHEQRRHLAKEHICEQCGKTFAQNTSLRHHRLLVHEQQRNYECEHCGKKFLRKYAMTEHVRNVHYGDRRLLDCPFCDLRFKDTHKLAQHRKDMHLNQGKFECRVCGLEFNHIDFFDAHRRSLQCRKKLGRHLFQQKQDNYDEMDLQQQHQDDQTILPDQLQQYHYEEQLDQGQMYHHNQQQVVVEGEEEDDNSQQQLDQHQLHNQQFKQEQLEQQEVVVEEITHDMHDEIVNEHEIEDLEDQENIEVDEHEKVKAEQQLLYEIAAMDNAYVNKMCDTAEDMDEYIEYEFARDCIEIADDCEEVDDGVAVDNDLLIQHHTEHLPEETFLYEEDDEEEQQLEEEEDEMHDYEIVEELDEDVEQLLICDTALDIKAEVLEPTQQEEEEEAQEETKNFKEEFMDQEVEEDHLIDEDTANGFGPEEEFQEIEYEEVGLEEEQAIDVEEKLIIPDKKEVKQEKPKKPPPQPCPEDKGPKGVARKYMLYDELVATIVDYDPDGTPIVEFSVSNNEADEKLPMECGICPDVMSRTKITAHLKTHLVPGTNRYQCIYCEETYKDCKYLAGHARRHMGIRPYVCELCKLYFSTKQDLRVHNQRRHQEKDHICEVCGKTFAQNTQLKRHREATHEKKRRFKCDLCPKSYYKNFSLQEHIRAVHMGKRRIIVCPFCGMQCRDAHKMARHRKQYHLHQTHFECHICNEEFTDINYFDAHKRSIQCRNNTRRKLEEEGQQQQQEEEQQLLQQAEEAKQELLIEDDSSQQYSQHSNEHNLLHTQQQQQQPEQHLLHGHDDGEDADNALETLKQKSGEKKFNVFNFHKMSPVFTKILIDFINEHENIGYDILSELHKFDLYIKGYKHPAFPSDALNEEPIELEYYKKSLNNDKIIMDYARYSWNSQGEMVYSCQICEKMKVTTNKDFTAMDDFLSHVEHMHGPSIKQEQEEQRMDKKTEELWVGELERMKKTAYKKHSEEFLKEIDEILGVEDFDANGILNSLESHKTSEQDNNSEILSDSSKENALSPSTSTTSSTAISCPTPKIYSKPCKLSQQERQNKRKKKRTSGQCDICNRTFNDLYNLRIHKMIHTGEKPFQCEECGKRFRQYNKLKIHCITHTNEKPFKCDICGKGFRFRNYLSVHKRLHSGENPYKCKFCEEYFHSLHSRRLHTKLIHTEAKTFTCSICGKILTAQCYLTAHMKRHTNQRDFKCDNCGKCFFSQSQLKDHQLVHTNLKPFECNVCQARFQRKSNYTQHLKIHTGEKSYVCSICNKSFAQNAGLYGHMKSHAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -