Basic Information

Insect: Lucilia sericata
Gene Symbol: -
Assembly: GCA_015586225.1
Location: NW:35428-42371[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.18 8.6 6.7 2.1 1 23 166 188 166 188 0.96

2 33 0.0012 0.057 13.6 1.1 1 23 205 227 205 227 0.96

3 33 4.2e-06 0.0002 21.3 3.1 1 23 318 340 318 340 0.97

4 33 0.072 3.4 8.0 2.3 1 23 346 368 346 368 0.97

5 33 0.00041 0.019 15.1 0.6 2 23 384 405 383 405 0.96

6 33 0.0034 0.16 12.2 1.2 1 23 412 435 412 435 0.97

7 33 2.2e-05 0.001 19.1 0.8 2 23 442 463 441 463 0.97

8 33 0.0014 0.063 13.5 0.0 2 23 470 491 469 491 0.96

9 33 7.1e-06 0.00033 20.6 5.0 1 23 497 519 497 519 0.96

10 33 0.0066 0.31 11.3 4.2 1 23 525 547 525 547 0.98

11 33 9.6e-05 0.0045 17.1 1.3 1 23 553 575 553 575 0.96

12 33 4.5e-05 0.0021 18.1 2.7 1 23 581 603 581 603 0.99

13 33 7.1e-07 3.3e-05 23.8 1.0 1 23 609 631 609 631 0.99

14 33 0.00062 0.029 14.5 0.8 1 23 637 659 637 659 0.96

15 33 0.023 1.1 9.6 4.1 2 23 877 899 876 899 0.94

16 33 0.18 8.5 6.8 6.0 1 23 905 927 905 927 0.94

17 33 5e-06 0.00023 21.1 0.4 1 23 933 955 933 955 0.98

18 33 4.4e-07 2e-05 24.4 0.8 1 23 961 983 961 983 0.96

19 33 0.14 6.5 7.1 3.3 1 23 989 1011 989 1011 0.92

20 33 1.7 77 3.7 0.1 2 23 1017 1038 1016 1038 0.94

21 33 0.0015 0.072 13.3 4.1 2 23 1148 1170 1147 1170 0.97

22 33 0.021 0.97 9.7 0.6 1 23 1176 1198 1176 1198 0.96

23 33 0.00047 0.022 14.9 5.3 1 23 1204 1226 1204 1226 0.99

24 33 3.5e-05 0.0017 18.4 2.2 1 23 1232 1255 1232 1255 0.97

25 33 0.0097 0.45 10.8 5.3 1 23 1261 1284 1261 1284 0.98

26 33 0.0024 0.11 12.7 2.2 2 23 1417 1439 1416 1439 0.96

27 33 0.00045 0.021 15.0 2.2 1 23 1445 1467 1445 1467 0.97

28 33 0.00071 0.033 14.3 1.9 1 20 1473 1492 1473 1495 0.95

29 33 8.1e-06 0.00038 20.5 2.0 3 23 1503 1523 1501 1523 0.95

30 33 0.22 10 6.5 3.1 1 23 1529 1551 1529 1551 0.91

31 33 0.0001 0.0047 17.0 0.1 1 23 1556 1578 1556 1578 0.98

32 33 1.1e-05 0.00049 20.1 2.8 1 23 1584 1606 1584 1606 0.99

33 33 0.00017 0.0077 16.3 1.5 1 23 1612 1635 1612 1635 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.18	8.6	6.7	2.1	1	23	166	188	166	188	0.96
2	33	0.0012	0.057	13.6	1.1	1	23	205	227	205	227	0.96
3	33	4.2e-06	0.0002	21.3	3.1	1	23	318	340	318	340	0.97
4	33	0.072	3.4	8.0	2.3	1	23	346	368	346	368	0.97
5	33	0.00041	0.019	15.1	0.6	2	23	384	405	383	405	0.96
6	33	0.0034	0.16	12.2	1.2	1	23	412	435	412	435	0.97
7	33	2.2e-05	0.001	19.1	0.8	2	23	442	463	441	463	0.97
8	33	0.0014	0.063	13.5	0.0	2	23	470	491	469	491	0.96
9	33	7.1e-06	0.00033	20.6	5.0	1	23	497	519	497	519	0.96
10	33	0.0066	0.31	11.3	4.2	1	23	525	547	525	547	0.98
11	33	9.6e-05	0.0045	17.1	1.3	1	23	553	575	553	575	0.96
12	33	4.5e-05	0.0021	18.1	2.7	1	23	581	603	581	603	0.99
13	33	7.1e-07	3.3e-05	23.8	1.0	1	23	609	631	609	631	0.99
14	33	0.00062	0.029	14.5	0.8	1	23	637	659	637	659	0.96
15	33	0.023	1.1	9.6	4.1	2	23	877	899	876	899	0.94
16	33	0.18	8.5	6.8	6.0	1	23	905	927	905	927	0.94
17	33	5e-06	0.00023	21.1	0.4	1	23	933	955	933	955	0.98
18	33	4.4e-07	2e-05	24.4	0.8	1	23	961	983	961	983	0.96
19	33	0.14	6.5	7.1	3.3	1	23	989	1011	989	1011	0.92
20	33	1.7	77	3.7	0.1	2	23	1017	1038	1016	1038	0.94
21	33	0.0015	0.072	13.3	4.1	2	23	1148	1170	1147	1170	0.97
22	33	0.021	0.97	9.7	0.6	1	23	1176	1198	1176	1198	0.96
23	33	0.00047	0.022	14.9	5.3	1	23	1204	1226	1204	1226	0.99
24	33	3.5e-05	0.0017	18.4	2.2	1	23	1232	1255	1232	1255	0.97
25	33	0.0097	0.45	10.8	5.3	1	23	1261	1284	1261	1284	0.98
26	33	0.0024	0.11	12.7	2.2	2	23	1417	1439	1416	1439	0.96
27	33	0.00045	0.021	15.0	2.2	1	23	1445	1467	1445	1467	0.97
28	33	0.00071	0.033	14.3	1.9	1	20	1473	1492	1473	1495	0.95
29	33	8.1e-06	0.00038	20.5	2.0	3	23	1503	1523	1501	1523	0.95
30	33	0.22	10	6.5	3.1	1	23	1529	1551	1529	1551	0.91
31	33	0.0001	0.0047	17.0	0.1	1	23	1556	1578	1556	1578	0.98
32	33	1.1e-05	0.00049	20.1	2.8	1	23	1584	1606	1584	1606	0.99
33	33	0.00017	0.0077	16.3	1.5	1	23	1612	1635	1612	1635	0.94

Sequence Information

Coding Sequence: ATGGAGTCTTCGCCTAAAACCTGTCTCACCTGTCTTTGTAATACCGATGAGGCACACAACCTCAATGGGATACTTTTGGAAAACTTAACAATTTTGGAAATACTGTTTAAAATTGTGCCACCCCTATTGGAAAATCAAATCTTAACACTCACACAATGGATATGTATTGATTGTTTGGATAAATTGGTTTTAGCTTATAAGTTTCATCAACAATGTTTGGAATCGGTCAGTTGTTTAAAACAGGATCAACAAAATGTTTGCAATCTCACCACCAACATGTATCCATTTGATGAAATTCCTATGGATTTTAAAGAAGATCCCGATAGACCATTTTATCAAGGTGAAGCTGAGGCGGATCGAATAAGTGTTAAGCAGGAGATTCTGGAAAATAGCAATGATAAATTAtctttgttaaaagaaaaatatatgaaaaaatcttCCTTAAAGGTggacaatttaaaaaaACTCAGAAAATTGAAGCAGCTTAAGGGCAAGTTTACTTGCCTGCAGTGTGCCAAGGGTTTCAGCAGTTTTAAACGTTTGAAGgaacataatttaaaacataaaaattttgataaagaagatgttcaaaataacaaaatctccTTAATATATAAATGTTATCAATGTCCTAAAGCGTTTGAAAAACCAACCTCCTTAGCAGCTCACTGCAGAATACATAAAAGAAAGATTAAGACAAAAAGTGCTAAAAGCGATAAAGTTAAGCAGTCTTTGAAAGAAGAGGATTTGGAAAAGGTTGATAGTTCTATAGTTAAGGATGAACATGAAACGGAAACGGAGGAAGAGGATTCTCAAGATGATGAATTAGACCATTTAGAAGAGAAGTTATTTGATAAAACAAAaggaaaatatacaacaaataaCAATTCTGCAGATAGCAGCAATGAGGATGAagaaaaacctAATAgtagtaaaataaacaaactaatttATGCTTGTGATAAATGCGACAAAGTATTCAAACGTCCTTATTGTCTAAGACGTCACAATAGGGTGCATGCCGCCGAGCGCCCTCATGAATGTAAAGTTTGTACATATCGTTTTGCCagtcttaatattttaaagattcaCATGTTTAAGCACAAAAAAGAATCGGGTCAATTAGACACACCCACCCCTAAAGGCATTAAATGTCCGGAATGTCCTAGACGTTGCCGTAATCAAAACACCCTTGCCGTTCATCTGCTAGAGCACAAACGCAAAAGAAAGGATTATCCCTGCATGGTATGCCAGCACAACTTTACCTCCGTAAAAACTCTAACAGTTCACATAATCACCAAACATCCTGAGGTGGAGCAACTTAAATGTGACGAATGTGAAAAGACATTTGTTGTACGCGCCCATCTAGAGGAACACATAAAACGGCACAAAGACCAGGAAAATCTAATATGTTTGGTATGTGAAAGAGAATTTCCCAATAATGCAGTTTTAAGGGAGCACATGCGTATACATAGCAGTGAAAATCCGTATCTATGTCCGAAATGTGGTAAAACATTTAGCAGTAACAGTTGTTTGCATCAGCATATGGAACGACATTTGGGATTGAAGAAACATCAATGTCCCGAATGTCCCATGCGTTTTAATTGTAGATCGGATATAAAGAAGCATATGTCAACGCATTTAAAGGTTAAGCCACATGTCTGCGATACTTGTGGGGCACGTTTTACCCGATCATATTCCCTAATCAATCACAAAATATCACATTCCGGACTGCGTTCGTTTAAGTGCAATCAGTGCAGTATGACTTTCTCAGTACGTAATTCTATGCTACGTCACATGCGTACCCATACTGGGGAGAAACCCTACAAATGTAAATATTGTGAAAGGGCCTATGCCCAAAGTGGCGACTTAACAAAACACTTGAGAACACATATCGGTGAGAATACCTATATGTGTGAACAATGTCCTATGTCGTTTAAATTTTATGgcgaattaaaaaaacataaaattgaacattttaaaaaggCGGAAGCGGAAAAAGCTAACCtagaacaagaacaacaaaaagaTGCTGcaacATTAACTAAAGTGAAAAGGAATtatattaattactttattacAATTATGGATTGTATAACAAAAACCTGTTTAACTTGTCTGGGTACCACAAATGAGGCAAGTAATCTACAGGATACTCTCCAAGATAATCTTAAAATATTGGAAATAATCTATAAAATTGTGCCCGTACTGCTGGAAAATCAAGAATTGACACTGCCCGAATGGATATGTGCAACATGTTTGgacaaacttgttatttcatacaACTTTCAAAAGCAATGTTTAGAcgccatacaaaatttatataaattagagGAAAATACTGAAGATgtggcaaaaaaagaaaattttgaagatatataTAAGCAGGAGTTGCTACAAGAAGATAATGAAGATTCAATGGAATCTTTTCatgataataaaatacaatttgagGAATTCGCCCTAGATTCTAAACCCGAAAATGAAGAGGATTTAGAAATGCCATTTTATCCAAATGATGATAAGCAGGAAGATAGTTCACAGGATTATTTAGAAGATAATGAAAGTGGcgAAAGTGAAAACAAACTAATAACTGATTCCCTACCACCTTATGAAACTGCTTCGCTACAATGTAAAAAGTGTAAACAAATCTTTAAAACTCATCAGGGTTTAACTTCTCACAAAACTAGAGTACATATaaggaaatatttatataattgtaaaaaatgttATAGAGGTTTCGATTCTCAGGAACAATACACTAAACATTGTAATCGCCATTTgggtataaaagcttttaaatgtcCCAAATGTGATAAAGTCTTTGATGCAAATAGCACGCTAAATCAACATTTAATTTCCCACTCCCAAGAGACTCCATATCTATGTACTATTTGCGGCAAAAGTTTTAATCGTTCGGGTTCTTTAAAACAACATATACTAAGACATGGCAATGTAAAACCATTTAAATGTTCTATATGTTCGAAAAGTTTTAAATGTCTGCCAGATCAGTTAAAACACATGTATATACATAAGAAAAAACGTAATCAGTGTAATCTTTGTGGTGTAAGGTTAGCCTCCTTAACAGCTATGGCAACGCATAAACTACTACATACAGGAGCGAAACAAACACAGGATATAAATACAAACGAAGCATTAAGTAAAGCTAATGAAAATGTGGGTTTGGAAAATGTTTCTAAAGAGGAAGGATCTCAAATAGAATTCAAACAGGAAGCTAAGGATAATGAACTTTTAGAACAGCAAGTACACAGTGAGAATGATGATGACACTATGGGTTCTCCATGTGAAGATAAACAGGAACAAGACAACCCTCTTGAAGTAAATAGAATAAGTAACAAATTGGAAAATCAAGTAAAGGAatctCAATGTTTTCGTATACAAGAACTTAATAATGACAGAACTAACTCATCGGAATCAAATCAATGTAAAGAAtgtaaaagaatatttaaaaattctcatGGCTTAAGTGTACATTATAAgaagaaacatttaaaaactcATTTATATAATTGTGATAAATGTGACAAAGGTTTTGATGCCGAAGAATTCTATATCAAACATTATAATCTTCATTTGGGCATAAAACCTTTTAAGTGCAATCAATGTGAAAAAACTTTCGAAAACAGATATTGCTATAACCAGCATTTAATTACCCATTCTGAAGACTCACAATTTCCTTGTAAAATTTGTGGCAAAAGTTTTCGACGTAAGGGTATTTTAAAGCAACATCACCAGAGAGCGCATACTGGTGAAAAACcctttaaatgtaaatattgtaGTAGAACCTTTAGTCTGGCATGTGATATGAAAATGCATAGAAAACGTATACATAAGGATATACAATCTGATGAAAGTGATGATGAAGATTTATGGTTGGAAAATCCTTTTAAAGAATTACAACAGCAAGATGTTACAAAACCGAAAGCTGGGGAACATAAGCCGCAGGAAAATGAATCGTTTAGCAATGATAATGGTACTTTGATAACTGTAAGCGATAACAGGGAAGTAGTTGAAACACAGCATATAAGAGAAGACTCTTTTAATGAGATATTGGAACTTAACAAAGACAGCAATGACGAAGTTACTTTgcttaatttaaatgaaaataaggaAGTAGTTGAACAACAGGAACCTGAAGAAGATTCTTTAAATGATATATTGGAACTAAATAAAAGCGAaattgaAGAAAATCTACTGATAGAGCTAAAAACTCcagtaataaaaaatcaatgtaaaatatgtaaacatgTATTTAGGACATCACAAGGTCTAGCCTCACACAGAACTAAAGCACATATAAAAACATATCAGTACAATTGTGATAAATGTTATAAAGGTTTTGATTCGAAGGAAAACTACAAAAAGCATGTTGATCGTCATTTAGGTGTAAAAGCGTTTAAATGTCCTCAATGCAATAAAgCTTTTGATTCGACCGGTACTTTAAATCAACATTTAATCTGTCATTCGAATGAGACACCTCATTTGTGTACGATATGTGGCAAAAGTTTTAATCGTGCGGGTAGTTTAAAACAACATACCCTAAGACATGGCActgaaaaaacatttaaatgttcCTTATGTCCCAAAAGTTTTAAATGTCTACCCGATCAGATTTCTCATATGTATAAACATAATGGCAGACGTTATGTGTGTAATATTTGCGGTGCTAGTTTATCCACCTCTTCATCTTTGGCAAGTCATAAGCTAATACATACCGGTGAAAGACCCTATAAATGTGATCAGTGTGATAAAagctTTAATATTTCATCTAATCTGCATGTTCATAAAAGAATACATACTGGCGAAAAGCCTTATAGCTGTCCATATTGTGAGAAAACTTTCCGCCAAAGTAATGATCGTAATAAACATGCCACACGTGTACATAGAAAAGAAATAGCTGAAGCAAAAGCTGCATCAAAAGTAGATGATAATGTAGAGCAGAATGTTTCTAGTTAg
Protein Sequence: MESSPKTCLTCLCNTDEAHNLNGILLENLTILEILFKIVPPLLENQILTLTQWICIDCLDKLVLAYKFHQQCLESVSCLKQDQQNVCNLTTNMYPFDEIPMDFKEDPDRPFYQGEAEADRISVKQEILENSNDKLSLLKEKYMKKSSLKVDNLKKLRKLKQLKGKFTCLQCAKGFSSFKRLKEHNLKHKNFDKEDVQNNKISLIYKCYQCPKAFEKPTSLAAHCRIHKRKIKTKSAKSDKVKQSLKEEDLEKVDSSIVKDEHETETEEEDSQDDELDHLEEKLFDKTKGKYTTNNNSADSSNEDEEKPNSSKINKLIYACDKCDKVFKRPYCLRRHNRVHAAERPHECKVCTYRFASLNILKIHMFKHKKESGQLDTPTPKGIKCPECPRRCRNQNTLAVHLLEHKRKRKDYPCMVCQHNFTSVKTLTVHIITKHPEVEQLKCDECEKTFVVRAHLEEHIKRHKDQENLICLVCEREFPNNAVLREHMRIHSSENPYLCPKCGKTFSSNSCLHQHMERHLGLKKHQCPECPMRFNCRSDIKKHMSTHLKVKPHVCDTCGARFTRSYSLINHKISHSGLRSFKCNQCSMTFSVRNSMLRHMRTHTGEKPYKCKYCERAYAQSGDLTKHLRTHIGENTYMCEQCPMSFKFYGELKKHKIEHFKKAEAEKANLEQEQQKDAATLTKVKRNYINYFITIMDCITKTCLTCLGTTNEASNLQDTLQDNLKILEIIYKIVPVLLENQELTLPEWICATCLDKLVISYNFQKQCLDAIQNLYKLEENTEDVAKKENFEDIYKQELLQEDNEDSMESFHDNKIQFEEFALDSKPENEEDLEMPFYPNDDKQEDSSQDYLEDNESGESENKLITDSLPPYETASLQCKKCKQIFKTHQGLTSHKTRVHIRKYLYNCKKCYRGFDSQEQYTKHCNRHLGIKAFKCPKCDKVFDANSTLNQHLISHSQETPYLCTICGKSFNRSGSLKQHILRHGNVKPFKCSICSKSFKCLPDQLKHMYIHKKKRNQCNLCGVRLASLTAMATHKLLHTGAKQTQDINTNEALSKANENVGLENVSKEEGSQIEFKQEAKDNELLEQQVHSENDDDTMGSPCEDKQEQDNPLEVNRISNKLENQVKESQCFRIQELNNDRTNSSESNQCKECKRIFKNSHGLSVHYKKKHLKTHLYNCDKCDKGFDAEEFYIKHYNLHLGIKPFKCNQCEKTFENRYCYNQHLITHSEDSQFPCKICGKSFRRKGILKQHHQRAHTGEKPFKCKYCSRTFSLACDMKMHRKRIHKDIQSDESDDEDLWLENPFKELQQQDVTKPKAGEHKPQENESFSNDNGTLITVSDNREVVETQHIREDSFNEILELNKDSNDEVTLLNLNENKEVVEQQEPEEDSLNDILELNKSEIEENLLIELKTPVIKNQCKICKHVFRTSQGLASHRTKAHIKTYQYNCDKCYKGFDSKENYKKHVDRHLGVKAFKCPQCNKAFDSTGTLNQHLICHSNETPHLCTICGKSFNRAGSLKQHTLRHGTEKTFKCSLCPKSFKCLPDQISHMYKHNGRRYVCNICGASLSTSSSLASHKLIHTGERPYKCDQCDKSFNISSNLHVHKRIHTGEKPYSCPYCEKTFRQSNDRNKHATRVHRKEIAEAKAASKVDDNVEQNVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -