Basic Information

Insect: Lucilia sericata
Gene Symbol: -
Assembly: GCA_015586225.1
Location: NW:339927-352623[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.0025 0.12 12.6 1.0 1 23 243 265 243 265 0.95

2 32 0.00032 0.015 15.4 1.8 1 23 275 297 275 297 0.99

3 32 3.1e-05 0.0014 18.6 0.3 1 23 303 325 303 325 0.95

4 32 7.8e-05 0.0036 17.4 0.1 1 23 331 353 331 353 0.96

5 32 0.00041 0.019 15.1 1.4 1 23 360 382 360 382 0.96

6 32 3e-05 0.0014 18.7 2.6 1 23 388 410 388 410 0.97

7 32 1.5e-05 0.00069 19.6 4.7 1 23 416 438 416 438 0.99

8 32 0.03 1.4 9.2 0.4 1 23 444 466 444 466 0.98

9 32 0.0059 0.27 11.5 3.3 1 23 534 556 534 556 0.98

10 32 2.5e-06 0.00012 22.0 0.9 1 23 563 585 563 585 0.98

11 32 0.00039 0.018 15.2 0.1 1 23 591 613 591 613 0.93

12 32 4.3e-07 2e-05 24.5 0.8 1 23 619 641 619 641 0.98

13 32 0.0029 0.13 12.4 3.6 1 23 648 670 648 670 0.96

14 32 1.7e-05 0.0008 19.4 1.6 1 23 676 698 676 698 0.97

15 32 3.6e-05 0.0017 18.4 3.9 1 23 704 726 704 726 0.99

16 32 0.017 0.8 10.0 0.7 1 23 732 754 732 754 0.97

17 32 0.0036 0.17 12.1 1.8 1 23 843 865 843 865 0.98

18 32 6e-06 0.00028 20.9 0.5 1 23 875 897 875 897 0.98

19 32 2.6e-05 0.0012 18.9 1.6 1 23 903 925 903 925 0.92

20 32 4e-06 0.00019 21.4 0.1 1 23 931 953 931 953 0.97

21 32 0.00019 0.0091 16.1 1.1 1 23 960 982 960 982 0.96

22 32 6.7e-07 3.1e-05 23.9 1.3 1 23 988 1010 988 1010 0.98

23 32 4.3e-06 0.0002 21.3 3.5 1 23 1016 1038 1016 1038 0.99

24 32 2.7 1.2e+02 3.1 0.1 1 12 1044 1055 1044 1057 0.91

25 32 9.3e-05 0.0044 17.1 1.3 1 23 1308 1330 1308 1330 0.98

26 32 3e-07 1.4e-05 24.9 0.7 1 23 1346 1368 1346 1368 0.99

27 32 2.6e-05 0.0012 18.9 1.3 1 23 1374 1396 1374 1396 0.95

28 32 0.022 1 9.7 2.0 1 23 1402 1424 1402 1424 0.95

29 32 0.00014 0.0065 16.6 0.9 1 23 1430 1452 1430 1452 0.96

30 32 0.0026 0.12 12.5 5.1 1 23 1458 1480 1458 1480 0.98

31 32 5e-07 2.3e-05 24.2 0.7 1 23 1486 1508 1486 1508 0.98

32 32 0.004 0.19 12.0 2.3 1 23 1514 1536 1514 1536 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.0025	0.12	12.6	1.0	1	23	243	265	243	265	0.95
2	32	0.00032	0.015	15.4	1.8	1	23	275	297	275	297	0.99
3	32	3.1e-05	0.0014	18.6	0.3	1	23	303	325	303	325	0.95
4	32	7.8e-05	0.0036	17.4	0.1	1	23	331	353	331	353	0.96
5	32	0.00041	0.019	15.1	1.4	1	23	360	382	360	382	0.96
6	32	3e-05	0.0014	18.7	2.6	1	23	388	410	388	410	0.97
7	32	1.5e-05	0.00069	19.6	4.7	1	23	416	438	416	438	0.99
8	32	0.03	1.4	9.2	0.4	1	23	444	466	444	466	0.98
9	32	0.0059	0.27	11.5	3.3	1	23	534	556	534	556	0.98
10	32	2.5e-06	0.00012	22.0	0.9	1	23	563	585	563	585	0.98
11	32	0.00039	0.018	15.2	0.1	1	23	591	613	591	613	0.93
12	32	4.3e-07	2e-05	24.5	0.8	1	23	619	641	619	641	0.98
13	32	0.0029	0.13	12.4	3.6	1	23	648	670	648	670	0.96
14	32	1.7e-05	0.0008	19.4	1.6	1	23	676	698	676	698	0.97
15	32	3.6e-05	0.0017	18.4	3.9	1	23	704	726	704	726	0.99
16	32	0.017	0.8	10.0	0.7	1	23	732	754	732	754	0.97
17	32	0.0036	0.17	12.1	1.8	1	23	843	865	843	865	0.98
18	32	6e-06	0.00028	20.9	0.5	1	23	875	897	875	897	0.98
19	32	2.6e-05	0.0012	18.9	1.6	1	23	903	925	903	925	0.92
20	32	4e-06	0.00019	21.4	0.1	1	23	931	953	931	953	0.97
21	32	0.00019	0.0091	16.1	1.1	1	23	960	982	960	982	0.96
22	32	6.7e-07	3.1e-05	23.9	1.3	1	23	988	1010	988	1010	0.98
23	32	4.3e-06	0.0002	21.3	3.5	1	23	1016	1038	1016	1038	0.99
24	32	2.7	1.2e+02	3.1	0.1	1	12	1044	1055	1044	1057	0.91
25	32	9.3e-05	0.0044	17.1	1.3	1	23	1308	1330	1308	1330	0.98
26	32	3e-07	1.4e-05	24.9	0.7	1	23	1346	1368	1346	1368	0.99
27	32	2.6e-05	0.0012	18.9	1.3	1	23	1374	1396	1374	1396	0.95
28	32	0.022	1	9.7	2.0	1	23	1402	1424	1402	1424	0.95
29	32	0.00014	0.0065	16.6	0.9	1	23	1430	1452	1430	1452	0.96
30	32	0.0026	0.12	12.5	5.1	1	23	1458	1480	1458	1480	0.98
31	32	5e-07	2.3e-05	24.2	0.7	1	23	1486	1508	1486	1508	0.98
32	32	0.004	0.19	12.0	2.3	1	23	1514	1536	1514	1536	0.98

Sequence Information

Coding Sequence: atgCCTTTATCCTTTGAAAATATGTGTCGTACATGCATGCTGAATGAAAGTAAACAACAAGAAATGGCAAacagaaataaagtaaaaatgaaAACGCCACAAATGGTGTCCATTTTTACTGTCCCGGAGGAAGccaaagaaaaacttaatttaatggAACTGATTAAAACTGCAGTACCACAATTGAAAATCGATGAAAATGATCAGTTGCCGAAGAATGTTTGTGTTGAATGCTCggaaaaaatcaaagaaatgtACAATTTTCAGCAGAACTGTCTAAGTAATGAACagaaattctataaaatgttAGAAGGAGACGATGATGCCATTAATCCTTTCAATGATACAGAAGACCATGAAGATGTCTTTAAGACTGAATTTGATGATTCGTTCATTGAGGAGAATTCTTTGCAGACTGATGAGGAAATGATTATGGACGAGGAAATAAATAGAGCAGCCGAAGCAAAAGAAGAGTTCATCGAAAGCTACAGTGATTGTAGTATCGACTTAGTTTGGGATGATGATAATAATAGTGATGCAGATTGGAATGAAAAGAAGGTGTCAagtaaattgaaaaaaagtaaaaaacacaaaaatgaaCTGGTTGGTGATGAAATATTCAACGTTTTTTGTGCGGATGAGAAAAAcgaagatgatgatgaagaaTTTAAAAGCAGTACAACAAAAAgatcaacaataacaaaagaaattaaaactaaaggaaATTATCCGTGCAAACGAtgcaagaaaatattaaaatcaaaagaTTCATTATTAAGACACGAAGGAAGACATGAAAAAAGAGACAAAGAAGGacgcaaatatgtatgtaacatTTGCAATAAAgCATTTCATTATGGTTCTGTATTGAGGGAACATCAAAGAAAACATGTTGGCGAACGTCCTTATCTGTGTTCGGAATGTGGCAAAGGCTTTACATCGGCGGGAAGTTTAAAGCAACATTCACTACGTCATTTAGAGGAAAAACAATTTCCTTGTCCCGACTGCCCCAGgtcatttcctaccaaaactgaTATGCTCTCACATTATGATATTCACAAGGCTAAACCCAGAAATCACATTTGTGATGTTTGTGGTCGTGGATTTTACAAGCCTTACTTGTTAAAACAGCACAAAATGTATCATAATAATGAGAGACCATTTGCCTGTGAATATTGCGATaaaagTTTTGTTACACACGAAAAAGTCAAACGTCATACCCGCATTCATACTGGTGAAAAGCCCTACAAGTGTAACTATTGTGTGCGAACATACTGCCAATCAAGTGAATTAATGAAGCATTTACGTTCACATTTGGGTGAAAATGTTTATCAATGCGAATTGTGTCCGGTTAGATTAAAAACCGTTAAACTTTTACGCAGCCACTTTGCAACACACAAAAACGATGACGAAGAAACAAAAGCTCGCAATTTAGCCGAACTTAATGCATTGGAGATGAAAGGCATGTTTTTCAAAATCGATGATGATCACTTAAAAGACGATGAAAATATAACGATGGACAATGCTAAACGACATAGAGCAGCTGcaagaaaaaagaaaagcaTAAAAGAAAATCCACTTGATGGCCAACAAAAGTTTTATCCTTGCAATAAATGCAAAAGAAAACTGAAAACAGAATTGTCATttaaaaaacaccaacaaatgCACGATAGCAAAGAACAAACATATAAATGTTCTGTATGCAAACAAGaaTTTGAAGACAAATCCTCGTTAAAAGATCATATGCGTGCACATAGTGGTGAGAAGGTATTTTTATGTCCAGAATGTGGCAAAGGTTATACCACAGCGGGAGGTTTAAAAGAACATTCATACCGCCATTTAagcgaaaaaaactttcaatgtCCTGACTGTCCACGCTCGTTTACCACAAAATCCGATTTGGTCTCCCATCATATTATACACAAAGCTAAACCAAAAAATCACATTTGCGACATTTGTGGACGTGGTTTTCACAAGCCTTTCCTActgaaaaaacacaaaatgtatCATAACAATGATCGACCATTTGCTTGTGAATTTTGTGAAAAACGttttgttacgaatgaaaaattaaaacgtCATACACGCATTCATACCGGCGAGAAACCCTATAAAtgcaattattgtaaaaatGCCTATTGTCAGTCGAGTGAATTGATAAAACATTTGCGTTCTCATTTAGGTGAAAATGTCTATCAATGTGAAATGTGTCCGCTGCGTtttaaaacagtgaaaatttTACGCGCACATTTTTCAACGCACAAAAACGATAATGAAGAAACTAAGAGACATAACTTGGCAGAATTAAATGCCTTGGAAATGAAAggagtattttttaaatTAACTGATAAATCTGCAATTCTCACAAGAGAAGAAGTAGATGACGAGGTTTTTGAAACACTTGAATTTGACGACGATGAAGATGTTAAAGATGAtggcgatgatgatgatgacgaggACTACGAGGAGGAGTTTAGCGCAAAAATCTCAACTACAAATAAACAACACATAACTGTTGAACAACTATATCCCTGTGACAGATGCAAACGGAAATTAAAATCGAAATTATCGCTTAAGAAACATCTAGAAATGCACGCTAAACGCGATAATGAAGAACCAAAATTTGTGTGCAATATTTGTGATAGAGGATTTACACAAGGTTACATGCTAAAAGATCATCTGCGTACTCATAGTGGTGAAAGACCATTTTTATGTTCAGAATGTGGTAAATCTTTTACCTCGTCCGGTAGTCTTAAACAGCATTCATTTCGACATCTCAATGAAAAACTCTTTCCCTGTCCAGACTGTCCGAAGTCCTTTCCAACTAAAACTGATTTGGCCTCACATTATGATGTCCATAAAGCCAGACCAAGAACTCACATTTGCGATATATGTGGTCGAGGATTTCCAAAAccctttttattgaaaaaacacaaaatgtatCATACAAATGATCGGCCATTTTCTTGTGAATATTGCGATAAACGttttattacaaaTGAAAAACTACAGCGTCACGTAAGAATTCACACTGGCGAAAAACCATACAAATGCAATTATTGTGAAAAGGCCTACTGTCAATCGAATGAATTAACCAAACATTTACGCATACATTTAGGCGATAATGTATATCAATGCGAATTATGTCCTCTAAGATTTCCCACAGTTAAAGTCATTATGAATAGTACAACTATTACACTCTTGGAAAACTTTTGTAGAACCTGCATGAATGGAGAAGTTGAAGATGAAAAGGAAACTAAAGACAATAAACgcaaaacaatttcaattttcaaTGAACCACAAAGTAAggaatgtaaaaatataacaattatgGAATTACTTATGCTTACAACACCACAACTAACTATTGAGACGGATGATATGTTGCCCAAAACTGTATGCGAAAATTGCTTGGAAAGGCTTGTAAGTGCTCATGAGTTTCAGCAAATGTGTATAAAAGTGGAGGAAAAGTTTCGTCAAATGATTAAAGATGATAAACCAGCAGTTAATTCACAAATTATCACGGATCCCTTAAttgataatattttaaagattgaAATAGATGAAGCATTAGACCAAGAGACGCCTCTTGAGCCAAAAAGCTTAAAAGAGGATGCGgaagatataaaatttgaaacgGAAGAAAATCATTGGGAAGACTATAGTGATAGTGATGAATTTTGTGATGTCGACAGTGATAAGGATAGTGAATGGGAGTCTTCGAATAATGTAACAAAAAGTAAAAAAGCTACAAGGGCTGCTGGCAAAAtggtaaaaaaagaaaaagatttgACTTCTAGTGATGTCAAAATTTCAAATGATATTGAGGATAAAAAAGATAACATCACATCGGAGACAATTAAAGAATCTAAGAAAAATTCCAAGGAAACAAGTAATACTAAGGATAACGAAAGTAAAAGTTTTGTATGCGATGAGTGTGGCAACCGTTTATCAACGCGAAAAAGTTTAAAACGACACAAACGTATACACCTTAGGCCGGCAGATTCAGGTGGTgagactaaaactagaactaaatatgAATGCGAAGTTTGTAAAAAGGTCTTTCAGCAATCCAGTTCTTTAAAGGATCACATGAGAATACATACTGGTGAACAGCCTTATCTTTGTTCAGAGTgtggaaaagcttttaaaagtttaagCAATATGAAGCAACATTTCCTACGTCACGGTACTGACCGACCTTATGTCTGTCAACATTGTCCGAAAAGATTTCCTTGCTTAAGTGATTTAGCATCGCATAAAGTAGtgcataataaaataaaatcacatATTTGTGATATATGTGGTGCGGGTTTCACGAAACCATATCTtttgaaaaaacacaaaatgtatCATACAGGCGAAAGAAATCATAAATGTGATTACTGTGATATGAGATTTGTTTTAGCGGATCAATGTCGTAGACATATGCGCACCCACACAGGAGAAAAACCATACAAATGCAAATATTGTGAAAGAGCATTTGCACAAAGTAATGATTTAATCAAACATATGCGTGGACATATAGGAGATAATGTCTATAAATGTGATTTATGTCCGCAAGGTTTTCGTTTACAATGTGATTTACGTGCCCATTTCTATACTCATAAAGATGACGATGAAGAAACACGAGCACGAAATTTGGAAGCCCTTAAAGAGGAAGAACGAAGATTACAAGTTAAATTCGGACTTGTAGGTAGTACATAG
Protein Sequence: MPLSFENMCRTCMLNESKQQEMANRNKVKMKTPQMVSIFTVPEEAKEKLNLMELIKTAVPQLKIDENDQLPKNVCVECSEKIKEMYNFQQNCLSNEQKFYKMLEGDDDAINPFNDTEDHEDVFKTEFDDSFIEENSLQTDEEMIMDEEINRAAEAKEEFIESYSDCSIDLVWDDDNNSDADWNEKKVSSKLKKSKKHKNELVGDEIFNVFCADEKNEDDDEEFKSSTTKRSTITKEIKTKGNYPCKRCKKILKSKDSLLRHEGRHEKRDKEGRKYVCNICNKAFHYGSVLREHQRKHVGERPYLCSECGKGFTSAGSLKQHSLRHLEEKQFPCPDCPRSFPTKTDMLSHYDIHKAKPRNHICDVCGRGFYKPYLLKQHKMYHNNERPFACEYCDKSFVTHEKVKRHTRIHTGEKPYKCNYCVRTYCQSSELMKHLRSHLGENVYQCELCPVRLKTVKLLRSHFATHKNDDEETKARNLAELNALEMKGMFFKIDDDHLKDDENITMDNAKRHRAAARKKKSIKENPLDGQQKFYPCNKCKRKLKTELSFKKHQQMHDSKEQTYKCSVCKQEFEDKSSLKDHMRAHSGEKVFLCPECGKGYTTAGGLKEHSYRHLSEKNFQCPDCPRSFTTKSDLVSHHIIHKAKPKNHICDICGRGFHKPFLLKKHKMYHNNDRPFACEFCEKRFVTNEKLKRHTRIHTGEKPYKCNYCKNAYCQSSELIKHLRSHLGENVYQCEMCPLRFKTVKILRAHFSTHKNDNEETKRHNLAELNALEMKGVFFKLTDKSAILTREEVDDEVFETLEFDDDEDVKDDGDDDDDEDYEEEFSAKISTTNKQHITVEQLYPCDRCKRKLKSKLSLKKHLEMHAKRDNEEPKFVCNICDRGFTQGYMLKDHLRTHSGERPFLCSECGKSFTSSGSLKQHSFRHLNEKLFPCPDCPKSFPTKTDLASHYDVHKARPRTHICDICGRGFPKPFLLKKHKMYHTNDRPFSCEYCDKRFITNEKLQRHVRIHTGEKPYKCNYCEKAYCQSNELTKHLRIHLGDNVYQCELCPLRFPTVKVIMNSTTITLLENFCRTCMNGEVEDEKETKDNKRKTISIFNEPQSKECKNITIMELLMLTTPQLTIETDDMLPKTVCENCLERLVSAHEFQQMCIKVEEKFRQMIKDDKPAVNSQIITDPLIDNILKIEIDEALDQETPLEPKSLKEDAEDIKFETEENHWEDYSDSDEFCDVDSDKDSEWESSNNVTKSKKATRAAGKMVKKEKDLTSSDVKISNDIEDKKDNITSETIKESKKNSKETSNTKDNESKSFVCDECGNRLSTRKSLKRHKRIHLRPADSGGETKTRTKYECEVCKKVFQQSSSLKDHMRIHTGEQPYLCSECGKAFKSLSNMKQHFLRHGTDRPYVCQHCPKRFPCLSDLASHKVVHNKIKSHICDICGAGFTKPYLLKKHKMYHTGERNHKCDYCDMRFVLADQCRRHMRTHTGEKPYKCKYCERAFAQSNDLIKHMRGHIGDNVYKCDLCPQGFRLQCDLRAHFYTHKDDDEETRARNLEALKEEERRLQVKFGLVGST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -