Basic Information

Gene Symbol
Ubp1
Assembly
GCA_015586225.1
Location
NW:10813-37699[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.59 4.3e+03 -3.6 1.1 86 133 47 97 29 105 0.53
2 3 6.2e-53 4.4e-49 166.4 0.2 18 190 361 530 347 537 0.91
3 3 8.7e-07 0.0062 15.5 1.3 199 222 601 624 598 625 0.93

Sequence Information

Coding Sequence
ATGGCTCTATCGCTGGTTGCTTCCCTGCCACATCATCAATCCAGTTATTTTGATATACAATCTTTTTTGGATCCTTATTCTTTGGAAACTCATAACGACACTCAAACCTCTTCGAATTATATGAGTGCAAATCAATCGTTTAATCAACAGCAGCACCAGCGTTCTACGAAAATTCTTTTAAACAATTACCACAACACCGATTTAATGGAGTTTAACAATAGTTCTAATAATCTACAACCAACTTCAGCACTACAGCAGCAGAATAATAGTCAGTTAACAACAAATATTGCACAGcAACTTTCTAATACAACAAATCGCAATTTAATGAGTGGTTTTCATCATCAACATTTTGGTGCCGAATATGAACCAGTTATAACATTTGTTGACTCTCCCCCAAATTCTGAAGAGTCTTGGCCGGACGATCAATCGAAAGATTCGCCAGGTCCACAGATAATTGACGTCCAAACTATATATTCAAATAGTGGATCACGTAAAAGACGAATGGATTGGGATCCTTTGGATATCGCTCAGAGTGAAAGCACTGCTTCTACACAAACTGGCGAGTTACCAGCAAAAATTTCAACACATCAATTATTAGAAAAGGATAAATATAAAAAGGAGCGATTAAGCAGTGgtCGTGGCACTTGGGGCGATGATATTGGTTTTGATTTAAATGCGGAATTTAATAGTAATTCCTATTTGAATAATGAATCCTTTATGACATTTGCATCTGGCTTACCCACCGCCCTTAAGCAAGAACCTCAAACTGATCAAttgaaaatcaataaaagttCATTGAACATTCATCAACAAGATCCgggtaatttaaatatttcaaccaAAAATGATAAGACACTGACAACGGCAGATGGTGGTCATATAGAAACATCAACCGAAAAAGTGAACAAAAATGATTTGATTGACAGTCATCATTGCATTTTGGATCAAAACTCAAATGAAAACAAGGGAAATAATCAAAATAGCAACGATCAGGCACGCAACTCTTCTGTGACACATCAGCTTTTAACCGTAGTTGATGCCAGTAAAATTGAGCAAATACCCACAGGACGCGACGCGACTGCAACATCCACAACTTCCAATTGCGATGATTATAAATTTCAGTACATATTAGGTGCTGCCACCTCTATTGCCACGAAAAATAATGAAGACACACTAACCTATTTGAATCAGGGACAAAGTtatgaaataaaactaaagaaaatcgGTGACTTATCCTTGTACAGAGATAAAATCTTAAAGagcgtaattaaaatatgtttccaCGAACGTCGTCTACAGTATATGGAACGTGAACAGATGCAACAATGGCAGGCCTCACGTCCCGGTGAACGTATTATAGAAGTTGATTTACCCTTATCCTATGGTCTGTGTCACGTTTCACAACTTTTAAATCCAAATTACTTAAATACGGTGGAGATCTTATGGGATCCCTTGAAAGAGGTGGGAGTTTATATTAAAGTCAATTGTATATCTACTGAGTTTACACCGAAAAAACACGGTGGCGAAAAGGGTGTACCATTTAGACTACAAATTGAGACATATGTTGAGAGttcaaatactaataacttgaATAATAATACTGTGGTGACAGGGAATAAATCTCCTTTAGGGGTACCAGCTGGAAATTCACCCTCACAAGCGGGTAATTTAACGCCAAATAGTTCGGTACTGAGTCTTGGTGTCGAAGCATCCTATCCATGCTGCAGCGGGCCAAAGAAAGGGAAGGGGGGGGGGGAAAAAAGGGAGGAGGAGGGGGGGAGggaggaacgaacgaacgaacgaGTTTTCAAATTAAAAGGTGCCGATCGTAAACACAAACAAGACAGAGAAAAAATCCAAAAGCGACCACAATCGGAACAAGATAAATTCCAACCCAGCTACGAGTGTACAATTATGACAGACATACCATTGGAATTAATAGCGCCAGCAACAAATACCAATACAAATGGCTGCTTTAGTCCAGAATACATGAAAGTTTGGCCAAATTCTCCTGTACATATGCCCAAATATGATGGTATAATACCATTTACTAGTGCCTCACCAAATGCCAACGCTAGTCCTATAGCTATAAATAGTGTTTCCTCAACAAATTCAACAAATCTTAAAATAATGGATCCAAACAGTATGGTTAATACACCAAACATGCTCTCGGATATCGATGAATATaATTCAATAACTATTATGCCTGAATCTACACCGGCACAAGTTACTCACTGGTTAACCTATCATCGTTTAACTTCATACTTATCAACATTTGCCCATTTTTCGGGAGCCGATATTATGAGAATGTCTAAAGAAGATTTAATTCAAATCTGTGGTCTTGCCGATGGCATACgcatgtttaatattttaagagcCAAAGCCATAACCCCACGTTTAACTTTCTACGTTAGTTTAGATGGGAATAATTTTAATGCCGTTTATCTTATATCTAATACATCTAAAGAACTatcacaaaaactttttaaacttccaggattttatgaaattgtagCCAAAAGTTCAGCACATAATGGCGGTGCTGTGCCCGCTACTGGCGGTTGTAACAACACCCTAATGGACAATTCAACACCATTTCATTCTTGGGGCATGCATTCGAAATATTCGGGCAGTGGTTCGAATATCTTCAATGATGtcaataataaaagtttaatttatgttaCCGGTCCCGCTGGTATACATGTGGCCGTTACCGATGAAGTTTTGAATAATGAAATACGTGATGGTAGTTTATATGGTCTAGAAGTACAAAATGGAAAAGTTATTATGAAATTaatcaataaaaatgaaaattag
Protein Sequence
MALSLVASLPHHQSSYFDIQSFLDPYSLETHNDTQTSSNYMSANQSFNQQQHQRSTKILLNNYHNTDLMEFNNSSNNLQPTSALQQQNNSQLTTNIAQQLSNTTNRNLMSGFHHQHFGAEYEPVITFVDSPPNSEESWPDDQSKDSPGPQIIDVQTIYSNSGSRKRRMDWDPLDIAQSESTASTQTGELPAKISTHQLLEKDKYKKERLSSGRGTWGDDIGFDLNAEFNSNSYLNNESFMTFASGLPTALKQEPQTDQLKINKSSLNIHQQDPGNLNISTKNDKTLTTADGGHIETSTEKVNKNDLIDSHHCILDQNSNENKGNNQNSNDQARNSSVTHQLLTVVDASKIEQIPTGRDATATSTTSNCDDYKFQYILGAATSIATKNNEDTLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQYMEREQMQQWQASRPGERIIEVDLPLSYGLCHVSQLLNPNYLNTVEILWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYVESSNTNNLNNNTVVTGNKSPLGVPAGNSPSQAGNLTPNSSVLSLGVEASYPCCSGPKKGKGGGEKREEEGGREERTNERVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMTDIPLELIAPATNTNTNGCFSPEYMKVWPNSPVHMPKYDGIIPFTSASPNANASPIAINSVSSTNSTNLKIMDPNSMVNTPNMLSDIDEYNSITIMPESTPAQVTHWLTYHRLTSYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKAITPRLTFYVSLDGNNFNAVYLISNTSKELSQKLFKLPGFYEIVAKSSAHNGGAVPATGGCNNTLMDNSTPFHSWGMHSKYSGSGSNIFNDVNNKSLIYVTGPAGIHVAVTDEVLNNEIRDGSLYGLEVQNGKVIMKLINKNEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01194134;
90% Identity
iTF_00921209;
80% Identity
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