Lser003024.1
Basic Information
- Insect
- Lucilia sericata
- Gene Symbol
- Xbp1
- Assembly
- GCA_015586225.1
- Location
- NW:53385-56174[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-16 7.9e-13 47.9 17.5 2 65 78 155 78 155 0.98 2 2 3.6 3.2e+03 -2.1 9.7 26 51 137 162 135 179 0.54
Sequence Information
- Coding Sequence
- atgtctACACAACCTACAGTTTTTATAACAGTGCCCAAATATGTGGCCATTACACCTATGCAAGCAGCTGGAACTGCTGTTACCACCGTAGGCAGCACAGCTACTACAGCTCTGCCAAAAATTAGACCAGCTCCCCCTACTCAAACTCCGGTTACAGAACAAGCTAATGATACTACAAATGAGACTCAAGCTCCCAAGGGAAAAAAGAGACGTTTGGATCATTTAACATGGGAGGAGAAAGTACAGAGGAAaaaacttaaaaatcgtGTTGCGGCCCAAACATCACGTGATCGCAAAAAGGCCCGCATGGAAGAAATGGAACATGAAATTGAAGATTTAacagaaaaaacacaaattttagtaAACAAATGCGAATCGCTGCAAGTTATTAACGATTCGCTATTggagaaaaatcaaaaacttgATATGGAAGTTGAAATATTAAGACAACAATTGCaagaattacaaaaacaacaacaactgcatcagcaacaacagctccagcaacaacaacaacacaagacTGTCACCTGTGCTGGCTGTGAGTCCTTACTCAACGGATCTGCAGTATCCAATAATACTGACCCTCTGCCGCAGGGCTCAAACCCCAAGGACTCCCAGTCATCACCGGAGACACTCAGCGTATTGAAGTTGAAGCAACAGCTGAAAAAGAGTGCAACAGTATCGTCCCTATGGCGTGTAATAGCTCTCTGCCTTCTCTACAAGATATGCTCTTACCCGACATCGAAATCGACGAAAGCGCTCGATGATGCAGAATTTGATGCCGGAAAGTTGGAAGAACTTGCCGAAAGCCTGCTTGCCGATATCACCGCAGACCTGGAGGCAAGCGATAGAGCGTGCAATGCGCCTGCTGCCGAAACTTCAAGCGGAACAGAGCGATTGTTTGGATCAATGGTGGGGTCCACAGCAGAGTGCTTGGAATCCGGCCAACATAAAATCAGCTACAATGGCAGCTGCCTAGAAGCCATTGCAACAGAAACAACAACACCTACaaatcaaacaatttcaaaTCATCATAATTCCCTACAAACACCTGAACTAACATTGgaaaataaatttgataaagaaacaaCTACAGCGCTGCAAACACCAGCAACTATAAACACAACTACAGCCTTAATAACAACAGTTTTACCCGACAACTCAGCAACCGCAACAGTTACCCCAGATACTGTTTATGGTACATACGATGCTAAAACCAACTCCATAACCATAGTCATGGACGATGTGGCAGTTCCGGTTAGTGAAGCTGTTGAAGAGATTTACTGTGATGGTGTAGCCGCCGCCAGTAGCTCTACCGATGAGGTTGTTTGCACTTCAGGCATGGCTTCACCCTCACAGGTTTATCTTAATGTTACCACCTGCTCAGATGACGAAGAGGACGAGGATGATGATGTTAATTTCAATCTCGATCCCATCGAGAAATTTTTATGTCCTAAACGTCCTTTAGTCTCACCTCTAGCGAAATCTCCGGCACCTTCGCTACACTCTGCCACATCAGATCATGGTTATGAATCTATAATTGGTTCCCCCTCACCACCCAGCCATCATTTTGAGCCTTTAAGTGAGGATCTCAGTAATGATGACTTTAGTACGTGGCCAGCGGGTTTTAATGAACTATTTCCCagtttaatatag
- Protein Sequence
- MSTQPTVFITVPKYVAITPMQAAGTAVTTVGSTATTALPKIRPAPPTQTPVTEQANDTTNETQAPKGKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEHEIEDLTEKTQILVNKCESLQVINDSLLEKNQKLDMEVEILRQQLQELQKQQQLHQQQQLQQQQQHKTVTCAGCESLLNGSAVSNNTDPLPQGSNPKDSQSSPETLSVLKLKQQLKKSATVSSLWRVIALCLLYKICSYPTSKSTKALDDAEFDAGKLEELAESLLADITADLEASDRACNAPAAETSSGTERLFGSMVGSTAECLESGQHKISYNGSCLEAIATETTTPTNQTISNHHNSLQTPELTLENKFDKETTTALQTPATINTTTALITTVLPDNSATATVTPDTVYGTYDAKTNSITIVMDDVAVPVSEAVEEIYCDGVAAASSSTDEVVCTSGMASPSQVYLNVTTCSDDEEDEDDDVNFNLDPIEKFLCPKRPLVSPLAKSPAPSLHSATSDHGYESIIGSPSPPSHHFEPLSEDLSNDDFSTWPAGFNELFPSLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921198;
- 90% Identity
- iTF_00921198;
- 80% Identity
- -