Lcup007809.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lucilia cuprina
Gene Symbol
nfxl1
Assembly
GCA_001187945.1
Location
JRES01000356.1:11832-14903[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 3 1.4e+04 -8.1 6.4 15 19 157 161 156 161 0.82
2 21 0.2 9.2e+02 -0.3 0.4 4 10 192 198 191 198 0.95
3 21 2.7e-08 0.00013 21.6 16.0 1 18 206 222 206 223 0.98
4 21 2.2 1.1e+04 -3.7 2.6 6 10 249 253 248 253 0.89
5 21 6.8e-05 0.32 10.7 13.7 3 19 261 278 259 278 0.91
6 21 1.7 7.9e+03 -3.3 0.9 6 10 303 307 302 307 0.86
7 21 2.1e-09 1e-05 25.1 13.1 1 19 313 331 313 331 0.99
8 21 1.3 6.4e+03 -3.0 0.5 1 7 356 361 355 363 0.49
9 21 1.3e-08 6.2e-05 22.6 10.9 1 18 366 383 366 384 0.96
10 21 0.56 2.6e+03 -1.8 0.3 1 5 393 397 393 402 0.83
11 21 3 1.4e+04 -5.0 2.3 5 10 407 412 407 412 0.91
12 21 0.00022 1.1 9.1 16.5 1 18 418 435 418 436 0.98
13 21 2.4e-10 1.1e-06 28.2 14.5 1 19 445 463 445 463 0.98
14 21 0.2 9.7e+02 -0.4 10.4 9 18 508 517 499 518 0.88
15 21 0.012 56 3.6 4.6 4 11 532 539 521 540 0.87
16 21 0.49 2.3e+03 -1.6 0.9 6 10 599 603 598 603 0.90
17 21 5.3e-06 0.025 14.3 5.1 1 11 609 619 609 620 0.96
18 21 3 1.4e+04 -4.4 1.5 15 18 633 636 633 637 0.85
19 21 0.0022 10 5.9 14.9 3 19 649 665 648 665 0.92
20 21 3 1.4e+04 -5.5 2.1 9 13 671 675 670 675 0.72
21 21 3.3e-07 0.0016 18.1 12.3 1 18 716 735 716 736 0.91

Sequence Information

Coding Sequence
atgcCGCCAACAAAGGTCAAACAAGAAAACTCTTCTAAAAATCCAACCCAAAAATTCAATGAGACTCATGCCAGAAACATTGAAGTGGccaaaaaattggttgaaaactACATTTCGTCGTCAGAAGATGAAGAAGAACTAGATGAGAAtactattttaaAATCGTTATATCAGCACTATGACAAACGCAAGGAGGATGAGCCGCTATTGGCCAAAACTGCTGGCTTTTTGGAAAATGTCTTACAAACTGGTGCAGCTACGTGTCTTATTTGCATAGGCAGCATTAAGCGTTCAAATGCTATTTGGTCCtgcaaatattgttattgtttctttcACTTGAACTGCATAAAACGATGGGCTAATGACAGTATGGCCCAGGCCAAAGCTCAAACGCAAAATGAACAGGGCTACTACAATCATATGGGAGAATATGTGCCACCTAAAAAGCCCAAAGCTTTACATTGGTGTTGTCCTCAGTGTAGAAGGGAATTTCAACCCGAGGAAAGGCCTTCAGAATATGAATGTTTCTGTGGCAAAGAAATAAATCCTCCATCACAGCCCTGGTTAATACCTCACTCTTGCGGTGAAATCTGTGGTAAAGCGCTACAGCCAAATTGTGGTCATAAATGTACTTTACTATGTCATCCCGGACCATGTCCACCATGTGCCCAATATGCCATTACATCCTGTAAATGTGGCAAATCTCCTGCAAAGTCAGTACGTTGCGTCAATAAGTTGTGGGAATGTCAGCAGAAGTGTGAATTGCTATTACCCTGCAAAGaacatgtttgtaaaaaaatatgccACAAATCGGGACAATGTCCACCCTGTCAGCAGACAAGCATGCAACCGTGTGAATGTGGACGGGAAAAGGCAAAACGCCAATGTTGTGATCAAAAATGGCATTGTAAAAAGCCCTGTGGAAAGCCATATTCTTGTGGCCTGCATACTTGTAAGAAAGTTTGCCATTCGGGTGATTGTGGAGATTGTCCTTTAAGTTTACCACGCTCTTGTCCTTGTGGTAAAACTaaaaaagttggtCCTTGTTCGGAGGTAATAGATACTTGTGGAGATACTTGCCAAAAGCTATTAGCTTGTGGCATACACACTTGCACACAACGCTGTCACAAGGGCAATTGTAATTTGTGTTTGATTATAACGAAAAAGAAATGCCGCTGTGGTATGCACGAAAGAGACTTGCCCTGTTCTAAGGAATTTACTTGTGAAACCAAGTGTAAACAAACACGAGATTGTGGCAAACATCCCTGCAATCGTAAGTGCTGCGATAGAAACTGTCCACCATGTGACAAAGTTTGCGGCAAACCCTTGTCCTGTGGCAAACATAAATGCCAGTCGATTTGCCATAAGGGCCCCTGTTATCCATGTCAGCAAAAGTCGCAAATCAATTGTCGTTGTGGTAAAAGTAAAAAGAGTGTACCCTGTGGTCGTGAACGTACTGCCCGCGTAGTTTGTTTGGAACCATGTCGcaTACCTTCTAAATGCCATCATGAAAATAAGCATCGCTGTCATAAGAATGAGTGTCCACCTTGTGCACAACCTTGTGGATTAGCAAATGACACCACCAAGTGTGATCACAAGTGTATGGCGAAATGTCATGCCTCGGTTAAGGTGGCTAAAAAAGCCAATCCTGATACTACCAGCATATGGGAGCCTACTAAACAGtttgaatttaaacaaatgcCTCATCCACGTTGTGAACAAAAAGTAAGTGTAACCTGTATCGGAGGACATGAAGTAGCTGATTGGCCCTGTTGGAATTCTAAACCAACATCTTGCCAGCGTTTGTGTAATCGTTTATTAAACTGTGGCAATCACAAGTGCTCTTTAGTATGTCATGCTGTAGCGGATTTAAAAGATATGAAGcaACAACCTGGTTGTGCTCCTTGCGAACAAGGTTGTAATATACCACGACCCGAAGGATGTACACATAATTGCCCAAGACCTTGTCACCTGCCACCCTGTTATCCTTGTAGTGTtgctattaaaacaaaatgccaTTGCGGCTTAATGCCCATTATCTATAAATGCAGCGATTATTACAATACTGAGGCTACTGAAGGTGAAATCATAGAAAGACAAGAAAACTTAAAGAGCTGTGGTAAtagatgtttaaaaaatTATCCTTGCGGTCATCGTTGTGCGGCTAAATGTCATTCTGGTCCTTGTCCATATCCCGAATCTTGCCGCAAGAAATTACGCATCTACTGCGATTGTAAACGTTTAAAAACGGAAATTTCCTGTGACAAACATCGAGCTGGCCTACAAAAATTACAATGCGATGAAAATTGCGTAGAAACACAAAAGACACTAGAGTTGGCAAGACAAAAGGAAGAGGAATTACGTCGTAAACAGGAAGAAGAACGTAACCGTTTGGAAGtagaacaatttgaaaaaaaatttagcaaGCGTAAACCCAAAGAACGTAAAACATTAGAAGTAAAACATAAGGATCCTATTAATTGGAAATTAGTTGGAGTATATGCTGGTATTTTTGCAGCTGTATTGCTAGCGGTTGCTTTAGCATTCTATGAAGATCATTAA
Protein Sequence
MPPTKVKQENSSKNPTQKFNETHARNIEVAKKLVENYISSSEDEEELDENTILKSLYQHYDKRKEDEPLLAKTAGFLENVLQTGAATCLICIGSIKRSNAIWSCKYCYCFFHLNCIKRWANDSMAQAKAQTQNEQGYYNHMGEYVPPKKPKALHWCCPQCRREFQPEERPSEYECFCGKEINPPSQPWLIPHSCGEICGKALQPNCGHKCTLLCHPGPCPPCAQYAITSCKCGKSPAKSVRCVNKLWECQQKCELLLPCKEHVCKKICHKSGQCPPCQQTSMQPCECGREKAKRQCCDQKWHCKKPCGKPYSCGLHTCKKVCHSGDCGDCPLSLPRSCPCGKTKKVGPCSEVIDTCGDTCQKLLACGIHTCTQRCHKGNCNLCLIITKKKCRCGMHERDLPCSKEFTCETKCKQTRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKSVPCGRERTARVVCLEPCRIPSKCHHENKHRCHKNECPPCAQPCGLANDTTKCDHKCMAKCHASVKVAKKANPDTTSIWEPTKQFEFKQMPHPRCEQKVSVTCIGGHEVADWPCWNSKPTSCQRLCNRLLNCGNHKCSLVCHAVADLKDMKQQPGCAPCEQGCNIPRPEGCTHNCPRPCHLPPCYPCSVAIKTKCHCGLMPIIYKCSDYYNTEATEGEIIERQENLKSCGNRCLKNYPCGHRCAAKCHSGPCPYPESCRKKLRIYCDCKRLKTEISCDKHRAGLQKLQCDENCVETQKTLELARQKEEELRRKQEEERNRLEVEQFEKKFSKRKPKERKTLEVKHKDPINWKLVGVYAGIFAAVLLAVALAFYEDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01313435;
90% Identity
iTF_00260355;
80% Identity
iTF_00921781;