Lcup011745.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lucilia cuprina
Gene Symbol
znf711
Assembly
GCA_001187945.1
Location
JRES01000975.1:1858254-1890036[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 49 9.8 6.5e+02 0.8 0.5 2 23 412 434 411 434 0.91
2 49 0.043 2.9 8.2 0.1 6 23 444 461 444 461 0.99
3 49 5.6e-05 0.0037 17.3 3.6 1 23 467 489 467 489 0.99
4 49 4.1e-05 0.0027 17.7 2.9 1 23 502 525 502 525 0.92
5 49 4.1e-05 0.0027 17.7 2.0 1 23 533 556 533 556 0.98
6 49 4.2e-05 0.0028 17.7 2.1 3 23 564 585 562 585 0.92
7 49 0.037 2.4 8.5 0.4 2 23 597 619 596 619 0.96
8 49 0.0011 0.073 13.2 5.3 1 23 626 649 626 649 0.93
9 49 4.2e-06 0.00028 20.9 0.7 1 23 655 677 655 677 0.98
10 49 0.00024 0.016 15.3 1.3 1 23 683 706 683 706 0.97
11 49 0.0038 0.26 11.5 2.0 2 23 791 813 790 813 0.95
12 49 0.0096 0.64 10.3 1.2 2 23 822 844 821 844 0.95
13 49 0.00021 0.014 15.5 1.3 1 23 851 874 851 874 0.93
14 49 6.2e-06 0.00041 20.3 1.7 1 23 880 902 880 902 0.98
15 49 2.3e-05 0.0015 18.5 0.9 1 23 908 931 908 931 0.97
16 49 0.015 1 9.6 0.6 2 23 994 1016 993 1016 0.96
17 49 9.1e-05 0.006 16.7 2.2 1 23 1023 1046 1023 1046 0.93
18 49 3.5e-05 0.0023 17.9 0.5 1 23 1052 1074 1052 1074 0.98
19 49 2.3e-05 0.0015 18.5 0.9 1 23 1080 1103 1080 1103 0.97
20 49 0.00044 0.029 14.5 5.4 2 23 1140 1161 1139 1162 0.93
21 49 0.0029 0.19 11.9 0.7 2 23 1174 1196 1173 1196 0.96
22 49 0.77 51 4.3 2.5 1 22 1203 1224 1203 1226 0.89
23 49 6.7e-06 0.00045 20.2 0.8 1 23 1232 1254 1232 1254 0.98
24 49 0.00039 0.026 14.7 5.3 1 23 1260 1283 1260 1283 0.98
25 49 4.8 3.2e+02 1.8 0.2 10 23 1291 1304 1288 1304 0.93
26 49 0.44 29 5.1 8.2 3 23 1312 1333 1310 1333 0.93
27 49 0.073 4.9 7.5 0.3 2 23 1345 1367 1345 1367 0.96
28 49 0.00079 0.052 13.7 1.1 1 23 1374 1397 1374 1397 0.95
29 49 3.8e-05 0.0025 17.9 1.2 1 23 1403 1425 1403 1425 0.98
30 49 0.0099 0.66 10.2 0.6 1 15 1431 1445 1431 1447 0.93
31 49 0.00088 0.059 13.5 1.8 1 23 1466 1489 1466 1489 0.97
32 49 0.0012 0.082 13.1 3.5 2 23 1499 1521 1498 1521 0.96
33 49 0.12 8.2 6.8 0.6 2 23 1530 1552 1530 1552 0.95
34 49 2e-05 0.0013 18.7 0.1 1 23 1558 1580 1558 1580 0.99
35 49 0.012 0.77 10.0 6.0 1 23 1586 1609 1586 1609 0.92
36 49 0.0062 0.41 10.9 7.3 3 23 1709 1730 1707 1730 0.95
37 49 0.0039 0.26 11.5 0.9 2 23 1742 1764 1741 1764 0.96
38 49 0.00049 0.033 14.3 1.2 1 23 1771 1794 1771 1794 0.94
39 49 3.8e-05 0.0025 17.9 1.2 1 23 1800 1822 1800 1822 0.98
40 49 0.046 3 8.2 2.9 1 15 1828 1842 1828 1857 0.95
41 49 4.8e-05 0.0032 17.5 0.9 3 23 1865 1886 1863 1886 0.95
42 49 0.38 26 5.2 0.3 2 23 1898 1920 1898 1920 0.95
43 49 0.00087 0.058 13.6 1.7 1 23 1927 1950 1927 1950 0.95
44 49 1.5e-06 0.0001 22.3 1.0 1 23 1956 1978 1956 1978 0.99
45 49 0.018 1.2 9.4 1.8 2 23 2020 2042 2019 2042 0.93
46 49 0.12 7.8 6.9 1.0 2 23 2052 2074 2051 2074 0.94
47 49 0.14 9.3 6.6 0.1 2 23 2082 2104 2082 2104 0.93
48 49 5.4e-05 0.0036 17.4 3.0 1 23 2110 2132 2110 2132 0.98
49 49 0.023 1.5 9.1 7.0 1 23 2138 2161 2138 2161 0.92

Sequence Information

Coding Sequence
atggTGGTTAAATGCCTGTTATGCTTAGAGTATCCTACAATACCGGGtccaaaatttttagaaatatttggaGAGGAAGGTTTACGTCTAGATATAAGTGcgattattaataaatatttttggctaAAGACAAACAGGAACAGTGAAgatgtacaaaaaatatgtatgacaTGTTGGGAAGTGGTAAGAGATTTCCATATACTCTATCAGAGAGTAGAGGAAGTCCATAAACATATagcagtcaagactatagtattggACGATCCACTACCTCAGGATGTTATGCTCAAGTCCGAAGATGATCCTTCTATGGCCCAAGATCCCATTATGGACGATAATGGCATGGGTGATTCTATATTTGATCCGGAAGTTAAGGTTGAGGTACATGATTTGGATTTGTTGCCACAAATAGAAATATTAGAGACTGCTAATGTATCGGACAGAAGTGCCAGATCGAGTCGTCGTGGTCGACCAGCTCGTGATCAAAGTCCCAAAGTCTCGACAAAACGTATTAAGAAAGAACAATCACCTGCAGCTGATGCCACTGACGTTTTCGCTTCAAATGAAAATCTCAATAAAGATGGTTTAAATGAATCCAGCTCGTTGGAGGACCTAAACTATACCAATTCATTGGATAAATCAGATAAAGAAGATAGCAGCAATAAAAGAAGAGGGAGACCTCGTAAAACGGATACTGAAAAAGCTAAAGCTACCACACCACGTTCTAAACGCTCAAagaaacaacagcagcagtcaTCAGATACAGCTATAAAAAGCGAACAAGATGCGGAAGATCAACCTTCCTGTTCTACAGCACAACAAACGGGTAACGCCGATTCAGCAGAGCCAAAAATCAAAACTGAAAATCCTACAGATGAACAGAATTATGATAACTTTGCCATAGCCGCTGAAAATTTCGAAGATGATGATGCTTATGCTCAAGATGATtacgatgatgataatgataataacTACGCTAAGGACTCGGAAGAATCCTCTCACTCAGAGCTAGAGTCTGATGCTTCGAATGACTCCGACTGGGGCGAAAGTCAAAACAAGAAAAAGGAAAAGTTTGCTGTTATCATGAAAAAAGAACGCAATGTTCCCAAGAAATATAAGAAACGTGAAAAACCTTTGGTAGAACCAAAACGCATGAGTCGAGAAGAAATTGAAGCTCGTCAAGCCCAACAGGCCGAATATGATTCCATAATAAcgaaattctttgaaaaaattcgcTGTCCTAAATGTGAACTTTTGGTTCATACGTTCGGTGAAATGCGTGCTCATTTCCGCTTGGATCATAATGATGATCATGGCTTTGTCGAATGTTGTGGACGTCGTTTTGCCACACGCAAATTTCTCGCCGAACACATATTAGTTCATTACAATCCCGAACATTTTAAGTGCAAGACATGTGATAAAGTCTGTCGTGATTCTACGCAACTGGAAAGTCACGAACAAACTCACCTGCCCAATCCACCTGCATCGAAATACAAGAAAACGTTTCAGTGTGAAAAATGCTCGAAAACATTTTCCTCTAAAGCTTCATTTGAACATCACATGGTGGCGAAACATGTACCACGAGAAGAATTCAAATTTGAATGTCCCGAGTGCAAGAAAAAATGTCCAACTGAAACAAAACTCAAAGATCACATGCGCAGTGTACACGATCCACAGAGAACGGTGATCTGTGATAAATGtggcaaaacatttaaaagtaccTACAGTCTTAAAAAACATCACGAACTCGAACATTCGGATGTACCAAAACCAGCGCCCATTCCTCAACAATGTGAAATATGTGGTGCATGGCTACGGCATTTGTCAGGTCTTAAAcaacatatgaaaaatatacacGAGGGCGTGCAGACAGAACATCGTTGTCATATTTGCAATAAAGTCTCTTCAACGGCACGAGCTTTAAAAAGACACATTTATCATAATCATGAGTGTATAAGAAAATTCCAGTGCACAATGTGTGATAAGGCATTTAAAAGGGCACAAGATTTAAggGAGCATACATCTGTTCATACCGGCGAGGTGTTATATACTTGTCCCAATTGTCCCATGACTTTCTTTTCGAATGCTAATATGTATAAACATCGACAACGTTTGCATCGGGCCGAATGGGAGGCTGATCGTAGTAAACCTATACCACCAAATATTATGAAACAAGCTAAACAGGgtagtaaatttgttaaaacaaaacgtGCACCCGGTGAAACTACACCCTCTCATTTGGTAACACCATTACCCATTGTACCACCTTCAACGGTTTTAAATCCTCAAATATTATATGCCAATATGACATGGCCATCTAAAGCTAAACTGCGTAAACACATGTATTGTCATGATACGAACAGACAAAAAGTTTGCGATCAATGTGGCAAAACATTTGCCTGCAATTCCAGTAtgcaaaaacatgttaattCTGAACATTCCGAAATTAAACCAGAACCTCaacaatgtaaaatatgtaataccTGGTATCGTAACCTGTCGGGCTTGAGAACACATATGAAATTTATGCATGAAAATATTGGAGGTGAACATCGTTGTCAGATCTGTAATAAAGTATCGTCAAATGCACGAGCACTACGAAGGCATATCTATTTGAATCATGAATGTGAACGTAAATATAAATGTCACATGTGTGAGAAGGCTTTCAAACGAGAACAGGATTTGAGAgaaCACATTTCTGTACATACAGGTGAAGCCTTGTATACTTGTCCCAATTGTCCCATGACATTTTCCTCTAGTGCTAATATGTATAAACATCGTCAACGTTTGCATAAGGCCGAGTATGCGGCTCATAAACAACAACCTTTGGCcttgaatattataaaacaagcTAAATCTATGCCAAATACAGTGCGCACTAAAAGACGTATGATTGTTGATCCACCTCAGTCGTCGGATATGAATATGCCCCCAACATCGGCTCTATTAAATCAACAGCTTGTTAAACCCGAACCTCAACAATGTACCATTTGCAATACATGGTATCGTAATTTAGCTGGTCTAAAGACTCACATGAAAAATATGCACGATAATATGGGCGAAGAACATCgttgtaatatttgtaataaagtaTCAACTACACAACGTGCCCTTAAGCGTCACAtctatttaaatcataaatgtGAAAAGAAATTCAAGTGCAATATGTGTGAGAAGGCTTTTAAAAGGGGTCAAGATTTAAGAGAACATATTTCTGTGCACACGGGAGAAGCTTTGTATACCTGTCCCAATTGTCCCATGACCTTTTCATCAAGTGCCAATATGTATAAACATCGTCAGCGTTTACATAAGGCTGAATATGCAGCCTATAAACAACAGGCCATGCCTCCTAATATTATAAAACAGGCTAAAACGGatttcCCAGCAAAACCCGTACACAGTTCTGTTTGCACCTGTATGTGTGATATTTGTGGCAAtacgtttaaaaataaattcacacTAAAAAAGCACATTGAATATCATCATTCGGAAAATCCACGTAAAGATAAAGAACCTCAAACATGTCCCATATGTTATAAAGTGCTACGTGGTCATAAGGGTCTAAGGGCCCACATGAAAAACATACACGATGACAATGGCGAGGAGCATCGTTGTAAAATATGTAATCATCTATCAACAACTGCCAAAGGTTTAAGAGTACATGAGATCTTTCGTCATGAAAAGGAACGAAAACACAAGTGTTCGTTGTGTGATAAGGCATTTAAAAGGCCATTGGATTTAAgaGAGCATATTGCTACGCATACAGGCATGTCTTTGTATAAATGTGCTGAATGTCAGgcgacatttaagtcaaattcaaattattatcaTCATAGAAGACGTTTCCATAGTGGAAAATCTAAAGCGGAattTCCTACCGCGAAACATTTGAGTGTTCATGAAAATACACATAATCCGCAAAATATAGTGATTTGTGATAAATGCGGTAAAACATTTCGTAATAAATGTCGTTTGAAATTCCATCACAGACATGATCATTCGAATGAACCGAAACCGGAAAAAATACCCGAACAATGTCCATTGTGTAATAAATGGTATTCATCGAAAGGTAGTGTAAgcgaacatataaaaaatatgcatacaGATAATGATGTTGAGCATCGTTGTCCGACGTGTGGCTTTATATCGACTACAGCGAAAGCCTTAAAGAAGCACATACTCTATAATCATGATGTCGTTCGTAGacataaatgtaatttatgtgAAAAGGCTTTTAAGAGACCGCAAGATATAAAGgAACATATGGCCACTCATACGGGCGAACCTTTGTATACTTGCGTTAATTGcggtaaaacttttaaatcgaAAGCGAATATATATCCAAGTAAACGACGCTTAAATGAACATAGACATCATCACAATCCAGCCCAGGCCTATGTGTGTGACCAATGTGGCAAAACAGTCTATACCCTTAATACGCTGCACAAGCACAAGAAAGTTGTACACGGTGTTAAACCACCCAAGATTCAACTGCAGTGTgaattttgtaaaagattttataCGGGCAAGCAGAATTTACAACATCACATCCGTAATATGCACAATACTAATGAGGATAAGCGAAATGTTTGTGAACTTTGTGGTTTTGTGTCCACCACTAGAGAAGGCAAAATGAAGCATATACGTTTTAAGCACAGGGCGGAAAAGAAATTTCAGTGTGCGGTGTGTGAGAGATCCTTTAAAGTGCCAGCTCTGTTAAAAGAACACATGGCTACCCATACCGGTGTGGATTTGTATAAGTGTTCATATTGTCCAAACACCTTTAAATCCAAGTCCAATATGTATAATCACTGTAAACGTTTGCATGCCGCCGAATTTGAGAACAGAACTACGAAACGCATGCGTATACCGAAAATAGTTCCGAGTTTAGAAGTTGTTGAAAGTGTTGAATTTGAATTGACAAAATTGCTGAAATTCCAAcgaattaacaaaataaatagttttataacttTCTTTAGAATTAaaaactttttaatatatagcAATCATTTTTATATCTCcaagttcattattatacatATCTTGAAAGAAATcttatttcCAACCGCAAAAAATTTGTCTCTACACGAAAATAATTCGCATAATCCTCAGAATATAGTGATATGCGATAAATGCGGTAAAACCTTTAGAGATAAATGTCGTTTGAAACTACATCACCGACATGATCACTTAAACGAACCGAAACCCgaaaaaataccacaaaaatgTCCATTCTGTAATAAATGGTATTCATCGAAATCGAGCGTACAAGATCATATACGTAATATGCATACAGACAACGATATCGAACATCGTTGTCCCACCTGTGGTTTTGTCTCGACTACAGCGAAAGCTTTAAAGAAGCATATACTTTTCAATCATGATGCTGTACGTAGacataaatgtaatttatgtgAAAAGGCCTTCAAAAGGCCTCAGGATATAAAGgaaCATATGGCTACGCATACGGGCGAACCTTTGTATACTTGCGTTAATTGTGGTAAAACTTTCAAGTCAAAAGCGAATATatttcccACCTGTCAACAAttgaatattcataaatatattcataatcCGCAGAAAATTATCATATGCGATAAATGTGGTAAAACCTATAAGTATAAATCTGGTTTGAAACTTCATAACAGACGTGAACATTCAAATGAAGCTAATGCTGAAAAAATACCAGCAGAATGTCCGATCTGTAAGAAGTGGTATACATCAAAATTGAGAGTACAAGAACATATAAGAAATATACATGAAAACACAGATATTGAACATCGTTGTAATACCTGTGGTTTCGTCTCGACCACAGCGAgagctttaaaaaaacatattctcTATAATCATCGTCTCGAgcgtaaatataaatgtaatttatgtgAAAAGGCCTTTAAAAAGTCTAGTACTTTAATGGAACATATGGCCACCCACACGGGCGAACCATTGTATGCTTGTCCAAATTGTGATCAAACTTTTAAGTCAAAAGCGAATATATATCCTTCTTTGCGTCATCTTAatcaacatcgtcatcatcataatcCCGCCAATGAATGTATGTGCGATCAATGTGGAAAAATTGTACGTACCCGCAACACACTGGACAAACACAAAAAAGCAGTGCACGGCATCAAGCCCCATAAACCTCAATTACAGTGTAAAATCTGCAAAAATTGGTATACTGGCAAAGGGAATTTACAACATCATATAAGCAACATACATTACAGTGAAactaaaagaaatgtttgtgaAATTTGTGGTTTTGTATCCACAACGAGGGCGGCCAAATTGAAACATATAATATATAAGCACAAATCGGATAAGAAACATGAATGTACGGTGTGTAAGAGAACATTTAAGGTGCCACATTTATTAAAAGAACATATGGCTACACATACAGGAGTGGATTTGTATAAATGTTCCTATTGTCCGAATACTTTTAAATCCAAATCCAATATGTATAATCATTGCAAACGTTTCCATACAGAAGAATTTGAAAAGAGAAACAAACGGATACgtgtttcaaaataa
Protein Sequence
MVVKCLLCLEYPTIPGPKFLEIFGEEGLRLDISAIINKYFWLKTNRNSEDVQKICMTCWEVVRDFHILYQRVEEVHKHIAVKTIVLDDPLPQDVMLKSEDDPSMAQDPIMDDNGMGDSIFDPEVKVEVHDLDLLPQIEILETANVSDRSARSSRRGRPARDQSPKVSTKRIKKEQSPAADATDVFASNENLNKDGLNESSSLEDLNYTNSLDKSDKEDSSNKRRGRPRKTDTEKAKATTPRSKRSKKQQQQSSDTAIKSEQDAEDQPSCSTAQQTGNADSAEPKIKTENPTDEQNYDNFAIAAENFEDDDAYAQDDYDDDNDNNYAKDSEESSHSELESDASNDSDWGESQNKKKEKFAVIMKKERNVPKKYKKREKPLVEPKRMSREEIEARQAQQAEYDSIITKFFEKIRCPKCELLVHTFGEMRAHFRLDHNDDHGFVECCGRRFATRKFLAEHILVHYNPEHFKCKTCDKVCRDSTQLESHEQTHLPNPPASKYKKTFQCEKCSKTFSSKASFEHHMVAKHVPREEFKFECPECKKKCPTETKLKDHMRSVHDPQRTVICDKCGKTFKSTYSLKKHHELEHSDVPKPAPIPQQCEICGAWLRHLSGLKQHMKNIHEGVQTEHRCHICNKVSSTARALKRHIYHNHECIRKFQCTMCDKAFKRAQDLREHTSVHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRSKPIPPNIMKQAKQGSKFVKTKRAPGETTPSHLVTPLPIVPPSTVLNPQILYANMTWPSKAKLRKHMYCHDTNRQKVCDQCGKTFACNSSMQKHVNSEHSEIKPEPQQCKICNTWYRNLSGLRTHMKFMHENIGGEHRCQICNKVSSNARALRRHIYLNHECERKYKCHMCEKAFKREQDLREHISVHTGEALYTCPNCPMTFSSSANMYKHRQRLHKAEYAAHKQQPLALNIIKQAKSMPNTVRTKRRMIVDPPQSSDMNMPPTSALLNQQLVKPEPQQCTICNTWYRNLAGLKTHMKNMHDNMGEEHRCNICNKVSTTQRALKRHIYLNHKCEKKFKCNMCEKAFKRGQDLREHISVHTGEALYTCPNCPMTFSSSANMYKHRQRLHKAEYAAYKQQAMPPNIIKQAKTDFPAKPVHSSVCTCMCDICGNTFKNKFTLKKHIEYHHSENPRKDKEPQTCPICYKVLRGHKGLRAHMKNIHDDNGEEHRCKICNHLSTTAKGLRVHEIFRHEKERKHKCSLCDKAFKRPLDLREHIATHTGMSLYKCAECQATFKSNSNYYHHRRRFHSGKSKAEFPTAKHLSVHENTHNPQNIVICDKCGKTFRNKCRLKFHHRHDHSNEPKPEKIPEQCPLCNKWYSSKGSVSEHIKNMHTDNDVEHRCPTCGFISTTAKALKKHILYNHDVVRRHKCNLCEKAFKRPQDIKEHMATHTGEPLYTCVNCGKTFKSKANIYPSKRRLNEHRHHHNPAQAYVCDQCGKTVYTLNTLHKHKKVVHGVKPPKIQLQCEFCKRFYTGKQNLQHHIRNMHNTNEDKRNVCELCGFVSTTREGKMKHIRFKHRAEKKFQCAVCERSFKVPALLKEHMATHTGVDLYKCSYCPNTFKSKSNMYNHCKRLHAAEFENRTTKRMRIPKIVPSLEVVESVEFELTKLLKFQRINKINSFITFFRIKNFLIYSNHFYISKFIIIHILKEILFPTAKNLSLHENNSHNPQNIVICDKCGKTFRDKCRLKLHHRHDHLNEPKPEKIPQKCPFCNKWYSSKSSVQDHIRNMHTDNDIEHRCPTCGFVSTTAKALKKHILFNHDAVRRHKCNLCEKAFKRPQDIKEHMATHTGEPLYTCVNCGKTFKSKANIFPTCQQLNIHKYIHNPQKIIICDKCGKTYKYKSGLKLHNRREHSNEANAEKIPAECPICKKWYTSKLRVQEHIRNIHENTDIEHRCNTCGFVSTTARALKKHILYNHRLERKYKCNLCEKAFKKSSTLMEHMATHTGEPLYACPNCDQTFKSKANIYPSLRHLNQHRHHHNPANECMCDQCGKIVRTRNTLDKHKKAVHGIKPHKPQLQCKICKNWYTGKGNLQHHISNIHYSETKRNVCEICGFVSTTRAAKLKHIIYKHKSDKKHECTVCKRTFKVPHLLKEHMATHTGVDLYKCSYCPNTFKSKSNMYNHCKRFHTEEFEKRNKRIRVSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-