Basic Information

Gene Symbol
Hr38
Assembly
GCA_001187945.1
Location
JRES01001220.1:16259-112657[+]

Transcription Factor Domain

TF Family
ESR
Domain
zf-C4|ESR-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1 7.3e+03 -4.0 2.1 15 34 93 106 75 140 0.39
2 4 0.74 5.3e+03 -3.6 0.5 221 244 203 226 190 237 0.56
3 4 2 1.4e+04 -5.6 4.4 64 64 458 458 347 563 0.68
4 4 3.2e-42 2.3e-38 132.1 0.0 1 270 1107 1369 1107 1371 0.93

Sequence Information

Coding Sequence
atgcgtAATCGTTTGGCTTCCTTGATAGTGGTGAAACAAGAGCCCTCCAACTCTTTAGGTAATCCAGCAAATACTTTAAACTCTTCCCATACATCCAACGCTATACCCTTGTCTCCCTCTTTTGAgattaataataatcaaatatatAATGATAACACCAATTTGACCATAAAAACAGAATTGAATGCCTATGagataaataataatcatatacAATTAAGTGATAGCtacaattttaatacatatcAGCAGCAtacacaacaacatcaacaacagcaacaacattctCAGCAGCTGCCTTTACAGCTTAAACCGACACACAACAATCATTTGTATCCTTTACACTCTCATACGccacaccaacaacaacagcagcatcagcaaATTGTACATACTTCTCCTGCTACTACTACTACCGCCAACTCAGCGAATTTAATTTATCCTTGTCGTAATTTATTTCCTGATGGTTGTGATAtttctcatcatcatcatttgaATTGTTCTAATTTTTCCAACTTCAATTCAAATCTAAATGAATCGACCACTTTATTGTATAATTCTCAtagtgataaatttattttgaaatcggAACCTTTATCATATGAACCGCAACATCAACACACTCATCTGCAGCAACAGCTGCTAAACTTACAACACACTGCCAATGAGCAGCGTTCTTCTTTGGAATCATCTTCATCTTCCTTGTCTCTAGACAATCAATggtgtttaacaaatttatcgGGTAGAAAACAATACAATAGTTTTCATAATTCTTCATCGCCGGATTATACTAGTTGTCAGAAAAATAgccataacaacaacaacaacagcaGTGCAGCATTTAACACTAACGCCAATTTACAAGAAGAACGTGCAACAGCAACGTTACCTACacccacaacagcaacaacaacaacaaacacaactgCTGCAGCATCAGCAACGGTATCATCAACAACAGCTACAACTGTGACACCACCTCTTAAAACACAAACTACAGCTAATACAACACCACCGAAGATctcagcaataataacaacaactacaaaaacaacagcgtCAACAACAAGCaaccaacaaacatttaataataaaaataatagcaaTAGCATCAATAATACTAGTGGTAATActaaattgcttaaaataaaaactgaaatcacAACAGCAATAGAACCAGAACAAGAAGAGACCCGGTCACAATCAATTGTTACcactaaaacaacaaacaatcgAACTACTGTATCATCTgctaattcaataataaaaacaacaatagctgttactacaacaacaactgcagcagCTGGAGCAACATCATTAGCATTATCAACATTAAGTAGTACAACAGCAAATCGTCTAACAGCCAATAACaatcagcagcagcaaaatCAACATCACAAGACACGGTCAACAAACGCTACAACAAGCATGTTACTATTGCAACCAAATAACACTTTCGGTACTCTTTCTCCGTTTGATAATTTTTCCACACAATCAAACTCTCAACAAAACCAAACTCAAGCGTCACAACATCATcctcatcatcaccatcatcatcaaaaCCACAACAATCCTTTACAAAATCAAAGTGGTGGACAccagcagcatcatcatcatcatcaccaccacAACCATAACGTGACGTCGAATAGCGGTAATCATCATATATTGTCGGTGGCTTCAGAGGATCATTTAATTGGTAACTTAACGGATACCACTACTTCAGAGCATTCGGAGTTAATTGATCACACTTTTAATCAATTGTCAGATTTATTTTTTCCTGCCGATTCCAATCAATCTTTACTTTCACCTACTATTGATCAAAATCCCTCTCGGGATACAGAGACATCTGTGCATCATCATCACAATCAGCTACAAGATTTACATTCTTCCTGTGAGACTTTGGTAGGCTCCAGTGAGGATATTACAAGCTCTATTGAGAACCTAACAAAATTAACCTGCCTACGTGAAAAAAGACTTTCCTCGATACCAGAACAACATACCGCTACTACACCCAACTCGGAACAAGATCACTCTTCGTTGTGTTTTGATCGTTCTACACCTCAAGAAATTGGTCTTCTCAGTTTAAGGTCCAGCAGTGATCCGGCCATAGCTTTACATACTCTACAAGAAAGACAAGctttacaacaacagcagcaacaacaatccGGCCATCATATTGGTCACTCACGTTCCGGTGGAGATCCTCTTTTATCGCCCCTGGGTGGACCACTCTCATTACCCAGTTTTCAAGAAACCTACTCTCTCAAATACGGTACATCATCTTCTACTTCAGATTCTTTAACTACGGAACTAACTATTAAAATGGATGAAGATTGTTATCCACTATCCACTTCAACAGAGGCTATAGGTGGTCCAGCATTAAATCAACACACCTCCTCCAACAACACTAATACATCCGTCAGCTCACATCATCAGGCAACACACTCACAGCATCACCAACAGCACGCTCATTTACATTCACAGTTGCAGAATCAACATAATTTAGCTGGAAGTCAACAGCATCTGCACAGCCAACCACCGCAGACAAGCAGCAATTTCAGTTATCATGGCCATTTTAATGCCACAACGACTCCAGCTTCATCAAGTTCTTCGGCTTCCTCTTATGAGTTTAATAACGGTTCCAGTTCGGGCAAtgaaaatgtgcaaaatttcaatgCATCCACAGGGGGAGAAAGTTTTTATCAGCAATATCAGCTGTCCTCACAACCAAATAACTATCAATCTTCGGCAGCTGAACGTTATAGTTTACCCACATTTCCCACCATGTCCGAATTGGAAGCAGCCTCGGCTGCAGCTTCTAATGTAGCTTTGGCTCCACTGCGCCGAGCTTCATTGCCCGTCAATCGTTCGGAATCGCCCATCAGTCATAGTCCGAAACTTCCTAAGCTGATAATTGGTAGCGGTAGTAGTTCGTCACTACATCTAAAGCATCACACACATTCACAACTGTCAAGCGCACCAAGCTCAGCATCCAATTCGCCCAGTGTGCGACAGCAAACATCGACTCCTATACTGCATCACATAACACAAACTACAGATTTGCTCAATGGTCGTGTAATACCGACGCCACCCTCCCAATTGTGTGCGGTATGTGGTGATACAGCTGCTTGCCAACATTATGGCGTAAGAACGTGTGAAGGCTGTAAGGGATTCTTCAAACGTACCGTCCAAAAAGGTTCCAAATACGTCTGCTTGGCCGATAAAAATTGTCCGGTCGACAAGAGACGACGCAACCGTTGTCAATTCTGCCGTTTTCAGAAATGTTTAGCCGTCGGCATGGTCAAGGAGGTGGTGCGAACCGATTCCCTTAAAGGTCGACGAGGACGTTTGCCTTCCAAACCTAAATCACCACAAGAATCACCACCATCCCCACCCGTCTCTCTTATAACCGCTTTAGTACGTTCTCATGTTGATACCACACCTGATCCCTCTTGTCTCGACTACTCACAGTATCGTGAACCTTCACAAGCCGCCTCACCAGTCGTGATGAGTGAAGCCGAAAAGGTTCAACAGTTCTATAATCTTCTAACGACTTCGGTGGatgttattaaacaatttgcCGAAAAAATACCCGGCTATTTAGATCTAACGGCGGAAGATCAAGAGTTACTTTTGCAATCGGCCTCTTTGGAATTATTCGTTTTACGTTTGTCTTATCGGGCGCGTGTCGATGATACCAAAATGACTTTCTGCAATGGCATCGTTTTGCATCGGAGCCAGTGTCAACGTTCGTTTGGTGATTGGTTGAATGGTATTTTAGAATTTAGCAAAAGTTTACACAATCTGGAAATTGATATATCGGCGTTCGCTTGTTTATGTGCGTTGACACTTGTTACAGaacGTCATGGCCTACGAGAACCGAAAAAAGTCGAACAACTACAAATGAAAATCATAGGTAGTCTACGAGATCATGTAACCTATAATGCCGAAGCACAAAAGAAACCACACTATTTCAGTCGGTTACTGGGTAAATTACCCGAACTAAGATCGTTAAGTGTACAAGGTTTACAGAGAATATTCTACTTGAAATTAGAAGATCTAGTACCAGCGCCCGCcttaattgaaaatatgtttgtggCGAGTTTGCCATTTTAA
Protein Sequence
MRNRLASLIVVKQEPSNSLGNPANTLNSSHTSNAIPLSPSFEINNNQIYNDNTNLTIKTELNAYEINNNHIQLSDSYNFNTYQQHTQQHQQQQQHSQQLPLQLKPTHNNHLYPLHSHTPHQQQQQHQQIVHTSPATTTTANSANLIYPCRNLFPDGCDISHHHHLNCSNFSNFNSNLNESTTLLYNSHSDKFILKSEPLSYEPQHQHTHLQQQLLNLQHTANEQRSSLESSSSSLSLDNQWCLTNLSGRKQYNSFHNSSSPDYTSCQKNSHNNNNNSSAAFNTNANLQEERATATLPTPTTATTTTNTTAAASATVSSTTATTVTPPLKTQTTANTTPPKISAIITTTTKTTASTTSNQQTFNNKNNSNSINNTSGNTKLLKIKTEITTAIEPEQEETRSQSIVTTKTTNNRTTVSSANSIIKTTIAVTTTTTAAAGATSLALSTLSSTTANRLTANNNQQQQNQHHKTRSTNATTSMLLLQPNNTFGTLSPFDNFSTQSNSQQNQTQASQHHPHHHHHHQNHNNPLQNQSGGHQQHHHHHHHHNHNVTSNSGNHHILSVASEDHLIGNLTDTTTSEHSELIDHTFNQLSDLFFPADSNQSLLSPTIDQNPSRDTETSVHHHHNQLQDLHSSCETLVGSSEDITSSIENLTKLTCLREKRLSSIPEQHTATTPNSEQDHSSLCFDRSTPQEIGLLSLRSSSDPAIALHTLQERQALQQQQQQQSGHHIGHSRSGGDPLLSPLGGPLSLPSFQETYSLKYGTSSSTSDSLTTELTIKMDEDCYPLSTSTEAIGGPALNQHTSSNNTNTSVSSHHQATHSQHHQQHAHLHSQLQNQHNLAGSQQHLHSQPPQTSSNFSYHGHFNATTTPASSSSSASSYEFNNGSSSGNENVQNFNASTGGESFYQQYQLSSQPNNYQSSAAERYSLPTFPTMSELEAASAAASNVALAPLRRASLPVNRSESPISHSPKLPKLIIGSGSSSSLHLKHHTHSQLSSAPSSASNSPSVRQQTSTPILHHITQTTDLLNGRVIPTPPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRSHVDTTPDPSCLDYSQYREPSQAASPVVMSEAEKVQQFYNLLTTSVDVIKQFAEKIPGYLDLTAEDQELLLQSASLELFVLRLSYRARVDDTKMTFCNGIVLHRSQCQRSFGDWLNGILEFSKSLHNLEIDISAFACLCALTLVTERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVASLPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00922161;
90% Identity
iTF_00922161;
80% Identity
iTF_00921480;