Lcup011710.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- CSRNP3
- Assembly
- GCA_001187945.1
- Location
- JRES01001418.1:595709-609578[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.47 6.6e+03 -3.6 3.5 81 92 60 71 22 116 0.39 2 5 0.073 1e+03 -0.9 2.1 55 114 81 138 65 154 0.53 3 5 0.015 2.2e+02 1.3 1.5 49 123 229 300 211 306 0.61 4 5 0.45 6.4e+03 -3.5 0.9 78 99 349 370 329 394 0.48 5 5 2.2e-95 3.1e-91 304.8 7.3 2 218 513 715 512 715 0.92
Sequence Information
- Coding Sequence
- ATGTTTACAcccattaaaaactttataacatacatacaaaagaaTGCAAGTGGTAATTCAATATTTGGAGGAAATAGTACAACAGAAGAAGAATCAACAAAAATGGAaacagaaaatatgaaaatcgAAATAAAACAAGAAGATATTGCAACTACATCAACAATGCAGTCGTCAGAACTAGAGATTCCAAAAGAAACAGATAAAAAGGAAATAGTTGGCGATAAAAAATGTGaagatgaaaaacaaataaaaatggagGAACCTAAAGATACTAGCTTAGAGGCGAGCAGTATGtctgaaactaaaaaaactacaaccaCTTTTATGAGCACATCTACAATATCGGCAGAAACTTCATGTGATTTTGAAGATGATGATATAGAGGCACAAATCGAAAgtagttttatgttgaaaaaaccAATTAAAGTTTCAGCGACACGTGGTTCGGAAATTTTGGAAGTTAAAAAGACATCAAATGCTAATTGCAGTATAGTTATTAGTCATGATTATAATCGTGGCCAGGCCTTAAGTCCTATTGATGATGAATTAAATGATTTCCGAGATGATCCAACGGAAATATTGGGTGCAACATCATCGCCTTGTTCAAATCAACATGCCGAAGAGTTTTGTTCGGTGGGCAGTGAAGATGAAGCATTAGAAAGAGATGGCGCCATAACTCCAGATGAGTTTGTAACCGAAGAAGAAGGTGATGCGGATGATaatgaaagagaaaaagaaCTAAAGTTTATGGATGGTGAAGAAACAGATCTTGAGATTGAAGAGGATGACAGAGATGTTGAAACTGAAAACGAACAAAGGGATGTGATCAATATTCACGATGATGAGGAGGATGAAGAAGAGCCATTCTTAGATTTGGTCAATTTCAAaaACAGCAATGTTATAGTTTTAGATGAAGTGGACCTAAATACATCTACGAATTCTATTTATACAAACAACACAGCAGATGATCCCTTAGCTATAGCATGCGAAGAACAAGAAGCCTTTGCTGCCGATAAAACATCCGCATTAGAAGAATTAAATTTACTCAATACTTCACAAACATCACAGGATGAAGATACAAGAACCACTACTGAAGATGATTTACAGTGGCTGAAGACGGATTTAGAGGATAATCAACCATCATGTAGCAATAAGGTAGCACTACTTAAAGATAACACATCAGAAGTTACGCCTGAAAAGGAAGAGCGTAATGGTGAGGGTTCTGACTCTGGTTTAGGCAGTGAAACCTCAGCCTTACACACGACCGCCACAAGTATTACCGATACTAGCCAGTTGAATATGACCACAGTCACTCCAGCACAGACACCTACacagacaaaaacaaaagacagTGAGAAATTATTGAGCTCAAATATTCTGCAACTATCAAAATCACCACCAAAGGAAGCCGCTAAACCCTTTAGATCAAACTTAAAAAGACGTTTAGAAGTTGATGATGATGGTTTAGGATCCTTAACAGCGACCGCCTCTGCGCTTAGTGATCATAGTTCTTTAAATGGCAGCATACAAAAGAAACCAAAGCGTTCAATAAATTTCGATACCGTACAAGTCTATTACTTTCCCCGGCAGCAGGGCTTTAGTTGTGTGCCCTCAGCGGGCGGTTGTACTTTAGGTATGGGAGCTAGGCATGTGgcctttaaaactttaacactAGCTGAGCATGCAGCCGAACTAAGACGAGCACATCGCATGCAATTGCAGGAAATCAATCCCAGAGGTTCTTCTAGTGATGACAGTGAAGAGTCCGAAGAAGATTATCTTAGTGAAGGTAGTGGTTCCGATTTGGACGGTGAGTCAAATGGTTTCCTACAACCTGTTTCGCCTAAACAAAGGCGAGCTCTGTTAAAGGCAGCTGGTATACGTAAAATTGATCCCAGTGAAAAGGCTGATTGCCGCAATATACGCAACAGTCGTGAAGTTTGCGGTTGTACTTGTCGTGATTTTTGTGACCCCGAAACTTGTGCTTGTTCTCAATCTGGCATTAAATGTCAAGTTGATCGTGATATGTTTCCTTGTGGCTGCTCTCGTGATGCCTGTGGCAATACAATTGGTCGAGTGGAATTCAATCCAACTCGTGTACGCACTCATTATATACACACCTTAATGCGTTTAGAAATGGAAAATCGTCAACAACAAAATCCTTACTCTTCTGCCGTTGCCTCACCCATGCAACCAACACCCTCCACGTATTATCAAAGTCATTTGCAACCTCAATCGAATTACAGTTCGGGTTATGCATCACCGGCGTATAACACTGCCTCCGAATTACATCAACAAACGGCTGCCAATACGTACTATCACTCACAAAACCCTTCCACATCAAATGGTCTGTATGGCCAACAACCCACTTTGGAAATGACGCATAGTGGTAGTGCGGCGGTTGCAGCTACAACTACATCGCAATATGGTATTGATAGTTTGGATTCAAGTCTTTTTGGAGGTACAGCTAGCGCAACTCCATCATATGGAGAGCTAATGCCGGTGTCTTCATCATATCATTATGGAAATGTACAAACACAAGCATCATCCTACAATTCCTATCATAATACACCCTACATTAACGCCAACAATGCCACAGCTTCACTTAACACACCCAATACCTACAGTTCATGTGCTGTTCCCTCTATACCACCCTATGGCACAGCTACAACTACCGAAGCTACTGGAGTTTATCACAGTGTAAGTGCATTAACAAGCCTAGAGACAACCACAGCACCCAGTTGCAGTGTTAATGGTACGATATCATTAGAAAATGATGCAAGTTCCAATTTTATAAGTCTATCCACACCACTGGCCAGTTCCTCAAGACTATCGCAAATAAATGATTTACTACAACACAATCGAAATGCAACCACGGCTCTAGTAGCCGTTTCACAAAACATTGGGGCCACAGACAATGATTCAGCAGCATCTGTAGCGTCTTCACTAAGACAAGTCAATGGTGTAACAGATAATTTACCGACAAGCAGCTCGTCAGCGTGTTCATCAATTAATACACCACCCATAGAAGATGCACCTAAAAGTTGTCTGGCTTATGAAGGACTAGTGGCACCTTTAAAGCCAGCACCTATAGTGGCTGTTATTGAAAAAGACATATGCAGAGGATCAGTTAAAACCACAGCACCAATAGTAACTGACATAATTGAAGACACACCAACATTACCCTTAAAAGAGGAAGAACAATCTACAGCAGCATCATTATCACAAACAACACCAGCATCATTAAATACCGAAATTTTGCCAGAATCATCTTTATTGTGTAATAATGAACATGATAATGATACGCTGGCGGCGGTAAGTGCAAAACTAGAACCTTCAACTATTGAAGTGGCAGCTGGCAACTAA
- Protein Sequence
- MFTPIKNFITYIQKNASGNSIFGGNSTTEEESTKMETENMKIEIKQEDIATTSTMQSSELEIPKETDKKEIVGDKKCEDEKQIKMEEPKDTSLEASSMSETKKTTTTFMSTSTISAETSCDFEDDDIEAQIESSFMLKKPIKVSATRGSEILEVKKTSNANCSIVISHDYNRGQALSPIDDELNDFRDDPTEILGATSSPCSNQHAEEFCSVGSEDEALERDGAITPDEFVTEEEGDADDNEREKELKFMDGEETDLEIEEDDRDVETENEQRDVINIHDDEEDEEEPFLDLVNFKNSNVIVLDEVDLNTSTNSIYTNNTADDPLAIACEEQEAFAADKTSALEELNLLNTSQTSQDEDTRTTTEDDLQWLKTDLEDNQPSCSNKVALLKDNTSEVTPEKEERNGEGSDSGLGSETSALHTTATSITDTSQLNMTTVTPAQTPTQTKTKDSEKLLSSNILQLSKSPPKEAAKPFRSNLKRRLEVDDDGLGSLTATASALSDHSSLNGSIQKKPKRSINFDTVQVYYFPRQQGFSCVPSAGGCTLGMGARHVAFKTLTLAEHAAELRRAHRMQLQEINPRGSSSDDSEESEEDYLSEGSGSDLDGESNGFLQPVSPKQRRALLKAAGIRKIDPSEKADCRNIRNSREVCGCTCRDFCDPETCACSQSGIKCQVDRDMFPCGCSRDACGNTIGRVEFNPTRVRTHYIHTLMRLEMENRQQQNPYSSAVASPMQPTPSTYYQSHLQPQSNYSSGYASPAYNTASELHQQTAANTYYHSQNPSTSNGLYGQQPTLEMTHSGSAAVAATTTSQYGIDSLDSSLFGGTASATPSYGELMPVSSSYHYGNVQTQASSYNSYHNTPYINANNATASLNTPNTYSSCAVPSIPPYGTATTTEATGVYHSVSALTSLETTTAPSCSVNGTISLENDASSNFISLSTPLASSSRLSQINDLLQHNRNATTALVAVSQNIGATDNDSAASVASSLRQVNGVTDNLPTSSSSACSSINTPPIEDAPKSCLAYEGLVAPLKPAPIVAVIEKDICRGSVKTTAPIVTDIIEDTPTLPLKEEEQSTAASLSQTTPASLNTEILPESSLLCNNEHDNDTLAAVSAKLEPSTIEVAAGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -