Lcup009949.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- -
- Assembly
- GCA_001187945.1
- Location
- JRES01000953.1:247562-251108[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.1 2.5e+03 -1.6 0.1 9 30 154 179 151 195 0.72 2 5 4.3e-12 5.1e-09 35.8 0.3 1 45 203 248 203 249 0.96 3 5 2.1e-06 0.0025 17.6 0.1 3 43 259 303 257 306 0.88 4 5 3.1e-12 3.7e-09 36.2 0.0 2 46 314 359 313 359 0.93 5 5 5.5e-05 0.066 13.0 0.1 3 45 367 411 365 412 0.93
Sequence Information
- Coding Sequence
- atgGCTAATTCCAGTGATATGAACAATAAATTGGAAGAAGCCTTATTCCTAAATCGTAAAATGCAAACACAGCTGCTGAACATGCGAGAAAAGCTGGAGAAGCTTTTGTCAAATGTTAAAGACCATTATAAGATTAATGATCTTATACTGAAAGAAGGTATTGTGCGGAGACGACAAAAAGGAATTGGTATAAAAGGTGCCTATTTGAAGGGAGGAACATTCTACTTGAAAGGCAATATGTTTTTCAAAGATATAAATTGTCGCAATTGTCCAAATAATCCAGATtatgaaagaagaaaattagAGAATGAAATGTTTCCAATGGACCTAAACCTTAAGTCGAGACATGTTTGGTCTACTACAGATAAACAAGGAGTTATTCTTGGCATTAAAGAACAAataatcGATTATTTGACAAAGTCTCCGAAAAGGCGTGGAGAGGAAAATAAAGAACTAGatagtgaaaagttggcaaaacTTCTGAATATGGTTCCAAAGGATTTCTGCATTGATTGGGATCATTTATCTAGTCATACCCTGCAACATCGCCATTCGGCTAAAACATGTGAGGCAATTTGGAATCTATTTTTACATCCAACATTAAAGCGTACTGCGTGGAcggaaaaagaaaatcaaaaacttttggAAGCGGccaagaaatataattttcaaaattggcAAGCTATAGCAAATGAAGTGGGTCATAGATCAGATTTTCAGtgttttgttCAATACAAAAACTACGTCTGGCAAATGTCGCCTGATTTTTCCACAAAATGGTCTAAGGAAGATGATAAACTTTTGCTTGAGGTTATAgctaaaaataatgtaaatggTATTATCAATTGGAGCAttgtaaatgcatattttccacATAAAGCCAAAAACACATTACATTCTCGTTATAACCACACACTTAATCCCGAAATACGTGTCGGTGTGCCATTTACACCAGAGGAAGACCTCCTTCTGATTGCAGCTGTTAAagaatatggaaaaaaatttaactgtaTACCTCGTACTCTATTTCCAAATCGATCGCTGATACAATTACGTACACATTACAATAATGTTCTGTGTAAACGTCATAACCATCACCCATGGTCTTTAGAGGATGATATCAAGTTGATGGAGTTTGTGACAGCAAATGGTACTAAATCGTGGATGGAATGTGAAAAATCTTTGGATGGAAAACATTCACGCATAAGTTGTCGTACACGTTTTTTAACTATAAGAAGGTATTTGGAGAAGAATCCAGATGCTAGCATCGAAGATATTCCCCGAAAAAAGGTGTCATCAAAACAcgcaataaatattgaaaattggaAAGAAAAAGTTGAGGAGTTGGCTGCGCCAGAaggattaaaattaaacaatgaaACAGAACAGAAAACTACAAAAAGTGAAAGAACCAAAAAACTGAAAgcggaaaaaattaaaagaactaaaaaagaaaaacccaaACAAGAAACAAACCCAACCAATGAGGAAATTCTAACGAATGAACACATAACACCACAACCAGATGAAGTAGTAATGATACAACCAATTACTGAAGGCTTGGAAACAAAGACAGATAATACACAtacattgaaattaaaaactagAAAGTCCgaaactgaaaataataaacCATTACTCACTTTAAAAACGAATAGtctagaaaattataatttctttaaatatgcttataattttaaaatgaataaacatCCCTGCGATAATGTACAATTAAATAACGAGGATATGGCCATAACAATGTCTGCTCTAGATCCCCAAATCCCCCTGCCAATAGAAAAATCTAGCTTTGATTCAAATATACCGGATCATGTTAAACTAAATATTGCTAATCTAACACCACAACCGTCGTTTCATGAAAACCTTGAACGTTTGCCTCCTAGCTGGTCTACAACAATGGGTTTTCGTGCCTTATGCATACACACAGCTGGCATTTCGACTAATTTACCAGCTGAGCATTTTGTAGATGaaacaaataatttcattacGAAATTTCGCGAACGTTTACGTACTGTTTTCTATTCAACAGCTCTGCTAAGCCGTTTAAACCCTGGCATGGTGGGTATAAACACAGCTGAAACTCAAACGAAAGCAGTTAAACGCAAACGTTCTTATGCAAAAAAggataatgaaaaaattacaaataaaaaaattaaatgtattgaaactattgaaaatataaaaaccgaATTAGaaacataa
- Protein Sequence
- MANSSDMNNKLEEALFLNRKMQTQLLNMREKLEKLLSNVKDHYKINDLILKEGIVRRRQKGIGIKGAYLKGGTFYLKGNMFFKDINCRNCPNNPDYERRKLENEMFPMDLNLKSRHVWSTTDKQGVILGIKEQIIDYLTKSPKRRGEENKELDSEKLAKLLNMVPKDFCIDWDHLSSHTLQHRHSAKTCEAIWNLFLHPTLKRTAWTEKENQKLLEAAKKYNFQNWQAIANEVGHRSDFQCFVQYKNYVWQMSPDFSTKWSKEDDKLLLEVIAKNNVNGIINWSIVNAYFPHKAKNTLHSRYNHTLNPEIRVGVPFTPEEDLLLIAAVKEYGKKFNCIPRTLFPNRSLIQLRTHYNNVLCKRHNHHPWSLEDDIKLMEFVTANGTKSWMECEKSLDGKHSRISCRTRFLTIRRYLEKNPDASIEDIPRKKVSSKHAINIENWKEKVEELAAPEGLKLNNETEQKTTKSERTKKLKAEKIKRTKKEKPKQETNPTNEEILTNEHITPQPDEVVMIQPITEGLETKTDNTHTLKLKTRKSETENNKPLLTLKTNSLENYNFFKYAYNFKMNKHPCDNVQLNNEDMAITMSALDPQIPLPIEKSSFDSNIPDHVKLNIANLTPQPSFHENLERLPPSWSTTMGFRALCIHTAGISTNLPAEHFVDETNNFITKFRERLRTVFYSTALLSRLNPGMVGINTAETQTKAVKRKRSYAKKDNEKITNKKIKCIETIENIKTELET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -