Lcup007515.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- ttk
- Assembly
- GCA_001187945.1
- Location
- JRES01000318.1:156893-182705[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-19 7.7e-16 57.2 0.0 2 45 604 648 603 648 0.97 2 2 7.3 1.1e+04 -4.2 0.7 3 11 681 689 681 692 0.82
Sequence Information
- Coding Sequence
- gaaaaaaaaaaacacacaaaacaacaTTCTCTCTTGTCACTTGTCATAATGTCAGtgcaacaattttgtttacGCTGGAATAATCATCAACCAAATTTCATTTCGGTCTGTTCATCTCTACTACACAATGGCACTTTGGTTGATGTTACACTGGCTGCGGAAGGGCGCCAATTGCAGGCTCACAAAATTGTTCTATCAGCGTGCAGTTCATATTTTCAGACCCTCTTCACAACCAATCCCTGTCAACATCCAATTGTTATACTAAAAGACGTCCAATATGACGATCTTAAGACAATGGTTGACTTTATGTACTACGGTGAGGTGAATGTGTCGCAAGAACAACTGCCGCACATACTAAAGACGGCAGAAATGCTTAAAATCAAAGGTCTCGCCGAAATGCCCACCGATCCTGCCAATTTAACAAAATCTGACAGTAAATCATCTAATGATGCTACTGAATTGGTGGGCAGTGGTGGTAATAATGGACAGTTAGGCGGTGGTAATAGTGGTGGTGGCAGTAATGCTGGCGGTGGAGGAAATACCAGCAGTGGGGGATTGGGCAGTAGTAGTGGTGGTGGCAGTGTTAGCGATTCAATATGGGGTAGTACTGAGTCACAatttcaacagcaacaacagcagcagcaacaacaacagcagcagcaacaacaacagcaacaacatcaacagcatcatcaacagttgcagcaacatcatcatcagcaacaacaacagcagcagcaacagttaCACACACAATTGCAAAATAGTCAAACACAAACctcacaacaacagcaacaacaacagcagcaacaacagcaacatcatcagcaacaatTGAGACGTACACCGTCTCCATTAGGCGCTGGCGCCTCACCAGCCACCAGACGAAAACGTTTAAGAAAATCTTCAAATAATGgatCCGGTGAACGTACCAATTCCGAAGATCATAACACATCTTTAGATGCCGCCACTGCTGGCGGCTTAACTTTATCCCAAATGAGTCAAATGTCATTTGGTGGTGCAGCTACAAATAGTGCTCTCAGTGGTTTAGCTGCACACTCTTTGCACACAGCTAAATTACTTAAAGAAGCCTCTAATAACGATCTTGAAACAAATCCCCAGGATTCTGATAGTTTAGATGATACCCATGGACATGTACATATGCAAATTaaacccGAAGTTGATATGAGTGGAGTGCCACAATCTATGCCATTGGATATATCCGGCGCTACAACGCCCTCTGAACATGATGCTCCTAATTCACAATCCGCACATTCagGTTTACAATGGACGGTTGTTGAACCAAATTATTCACGCTTTTCGCTGTCATCCTGTCCCACCAATTTAATTGGCAATAACAACAATCAAAATCaatcaaataacaacaataacaacagctcGAGTAGtgatcaacagcagcaacaacagcagcagcagcaacatcaacgTCAACAGCAAGAAGCTGTTGCTagtcaacagcagcaacaacaacagcagcagcaacagcaacaacatttgcAACAGCTACAACAATATCAACATCAACAAAACTCTGCATATTCGCCACAAATCATAACGGTCAGTGGTTATACCAATGCAGCAGCGGCTGCTGTTGCGGCGGCACAAAATCTATCACCGCCCTCACCCAATGACGGCAATATGGTGCAATCAGTATACAGCCAAGGACCCACGCCCACCCAATCACCAGTGGGCAATGCCTCTGGTTCGGTGGGCGGCAATAATATGGCCTCCATCAATTCCGCCAACAATGCCAATATAAAACGTAAGCGTTCGGTTAATCCACAAGGTGATGAAAATTTTATACGGGCCCTGGAGGCAGTGCGTTCGGGAGGTATAGGTTTCTGTAAAGCAGCTCGTCTATATGGCGTCAATAACCGTACTTTATGGCTGGAGTACAAGAAGCGCGGTTATCCTGTCTCCAGGCCCAGTATAAAATCACGTGTGGTCAAGCAAGAACCGAATCTCTCACCCTCCCCCACACCACCTGCCAATGCCACAGACGATACCAATGAGAACTATGATCATATGGCGGCAGCAGTGGCTGCTGCACAAACGGCCGCCCTAAATATGCAAATACCACCGACTTCCGAAACACCAACACCCTCACTGATGTGTACACCCCATCATGCTGGCACAGCCGCTGGTGCTACCACACATCCCACCATGGGTGTAATGAGTTTCTTGGATACCCGCCATCTGGACTTCCCCGCCAGTCTGCATTCAATGTCACGTCAACGTTACATAGATGCCAGCGCTGGCGGTGGTGGTGCCGGAGCGGGTACCATTAATAATTCAATGTCTACATCTTCGGCACATTCTGCGACGGTGGTGGCTACAGAAACGgtaccaacaacaataatacccATGCATTtgcatcaacatcatcatcaatcCCAACATCCCCACTCACATACGAGTAGTCATAGTCATGAGCCACAacagcaagaacaacaacatcaatCTCATCATCAAAATATTCAACAACATTCACATCCAACGTTAATACAACCATCACCAAATCAATCATCTCAAGCTaacacatcatcatcatcatcaattgTTACGACGAGCAGTGCAGCAGCTGCTGCCTCGGCCCTGCTCCAGCAAACAACTCTATCGTGTGATACTCAAACGCCAAATGCCGCAACCAATCATCATCATAGTCTTGTTGCTGCACCCCAACCTCAGGCTACTACaatatatgtacaaaattatGCCACAGCAACACCGATTATAGTACATCCAACGGATAATACCACCACTACATATATGGCCAAATTGACAGCTTTACCACCTACAAAACCCACTTGCgcgttaaaagtttttcatatggAAATCACAATTCGCCAACAAGCATATAATTCATTTAATGGAAATTCATATTATGaccaaaataaaactgttaataaatttatttcttttttttccaaaacagaAGATACAAAAGCCTCCCTCGGCCTAAGTTTGGCACAATCCCCTCAACAGCAGCACCAACAACAACTGGAACCCCATCAACCGCCACAACCAGCTCAAATGGGAACGAAACGCAATCGTGTACTTACAAGACAACCACGTGTTAAACGTGACAGCGATAGTCTATCCAATAATCAAATATCACCAGAACCCACAACGGGTAGCTTAGATTTTGAACCATTCGGTGCATCACAAACGCTTTATTCATCGGCCGTCCATGGTTTGCATCATATGCCAACGCATCATCATCCTCACCATCACGGTCATGGTCATGGTCATCATCATTTGTTAACCGTACCACCGCGCATTGAACGTCATTCTTCGGAACCGGCACCAAGTCTATCACCAAATTCACCCCACCTTCTTAGTGTACCTCAGACGACACCATTTTTGGTTAAACAACATTCAGATCCACTACTACCAAGTCAACATTCAGCTCATCTGGCAAGCGGCAGTGGTGGTAGTGGTAATCTTACCAATCCTTTTGCTCCTTTACATCGACAATATTCACATCCTTTGACGGGAGCAGCAGGTACTTATTTGGCCTCTAGTGCACCGTTACAACATTCACATCACATATCACTACCAGAATCTATATATGAGACGGCATCACCACCACCAGCCGGCTCTTCGCAATATATAGTCCCACAAACGAACACACAACCGCCGCAGGCTTCCTCTTCATCCTCCAACAATAATAATGCAACAAGTACTTCTTCCGCAAGTCCTACAAAATCGATAAGCTTGCCGCAGTTTACCACAACTTATATGGGAAATGAAAGATCTAATTCGTCGAATGTGGCTTGTTCACCGCCCATACCTAGAGTTCCTACCGTACAATTGGCCGAACGCAGTGCTTCAGAAGATAATGCATCATCTGCAACCGCTCAGACGTCTGCTTCGTCATCGTCAACATCATCATCTACagttaatacaaacaaatttcgaAATTCAAAGTCAGCATCTGCTGTTATGTTAACGGAACGGGCTGGTGGTACATCATCAAGTGGTGGACAGTCGGGCTCATTCGAACATTTGCCAACATTGCGTGTTAGAAACGAGGAATTACAGAGATCAGTATCATCTCCACAGACCAACCGGGAGATAATAACTTTGGAAAATCCACGTTCTAGTCATTGTCCCGTCATACGACCTGGGCCAGCATTGGGATGTAATTTCTGTTGGAACACAATCGATGGTCATGGTAGAATTTTGCGACGTAAAACCAAATACCACTGTCCAGAATGTCAAACGAATTTATGCATAGTGCCATGTTTCCAAGAATATCACGAAcgtttaaataatgaaatcgAAGCAGccacagcatcatcatcatccacaAACAATACAACTAATACATCAAGAGCAAACAATTCCTCATCTAGCTCATCAGCTAATgctagcagcaacaacaacaacactagcAATAACAATAGTCAACAACAGGAAACACGAACGAATGTCCAACAAACAAGTAGTAATGCAACTTCTACAACCAGTAGACATTATACAAAAACGGAAACTTTTTAA
- Protein Sequence
- EKKKHTKQHSLLSLVIMSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNDATELVGSGGNNGQLGGGNSGGGSNAGGGGNTSSGGLGSSSGGGSVSDSIWGSTESQFQQQQQQQQQQQQQQQQQQQHQQHHQQLQQHHHQQQQQQQQQLHTQLQNSQTQTSQQQQQQQQQQQQHHQQQLRRTPSPLGAGASPATRRKRLRKSSNNGSGERTNSEDHNTSLDAATAGGLTLSQMSQMSFGGAATNSALSGLAAHSLHTAKLLKEASNNDLETNPQDSDSLDDTHGHVHMQIKPEVDMSGVPQSMPLDISGATTPSEHDAPNSQSAHSGLQWTVVEPNYSRFSLSSCPTNLIGNNNNQNQSNNNNNNSSSSDQQQQQQQQQQHQRQQQEAVASQQQQQQQQQQQQQHLQQLQQYQHQQNSAYSPQIITVSGYTNAAAAAVAAAQNLSPPSPNDGNMVQSVYSQGPTPTQSPVGNASGSVGGNNMASINSANNANIKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPANATDDTNENYDHMAAAVAAAQTAALNMQIPPTSETPTPSLMCTPHHAGTAAGATTHPTMGVMSFLDTRHLDFPASLHSMSRQRYIDASAGGGGAGAGTINNSMSTSSAHSATVVATETVPTTIIPMHLHQHHHQSQHPHSHTSSHSHEPQQQEQQHQSHHQNIQQHSHPTLIQPSPNQSSQANTSSSSSIVTTSSAAAAASALLQQTTLSCDTQTPNAATNHHHSLVAAPQPQATTIYVQNYATATPIIVHPTDNTTTTYMAKLTALPPTKPTCALKVFHMEITIRQQAYNSFNGNSYYDQNKTVNKFISFFSKTEDTKASLGLSLAQSPQQQHQQQLEPHQPPQPAQMGTKRNRVLTRQPRVKRDSDSLSNNQISPEPTTGSLDFEPFGASQTLYSSAVHGLHHMPTHHHPHHHGHGHGHHHLLTVPPRIERHSSEPAPSLSPNSPHLLSVPQTTPFLVKQHSDPLLPSQHSAHLASGSGGSGNLTNPFAPLHRQYSHPLTGAAGTYLASSAPLQHSHHISLPESIYETASPPPAGSSQYIVPQTNTQPPQASSSSSNNNNATSTSSASPTKSISLPQFTTTYMGNERSNSSNVACSPPIPRVPTVQLAERSASEDNASSATAQTSASSSSTSSSTVNTNKFRNSKSASAVMLTERAGGTSSSGGQSGSFEHLPTLRVRNEELQRSVSSPQTNREIITLENPRSSHCPVIRPGPALGCNFCWNTIDGHGRILRRKTKYHCPECQTNLCIVPCFQEYHERLNNEIEAATASSSSTNNTTNTSRANNSSSSSSANASSNNNNTSNNNSQQQETRTNVQQTSSNATSTTSRHYTKTETF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921497;
- 90% Identity
- iTF_00921497;
- 80% Identity
- iTF_00921497;