Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_001187945.1
Location
JRES01000142.1:300803-402893[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-14 6.9e-11 41.4 0.0 1 45 417 462 417 462 0.97
2 2 9.7e-19 1.5e-15 56.3 0.0 1 43 891 934 891 936 0.95

Sequence Information

Coding Sequence
ATGCAAGCAGCTGTTAAGAAAGGAGTCAGTGTCAacagtatatgtatatGCTTAGAACGGGTCGCTGAGGAGCTAATGGGGCGCAGGAAATGGAAGCAATATCAAGAAACATTAATGCGAACCCACTTAAATTCCGACCAATTTGTTGCATCAATCGAAGACAACAATATCGAACTGAAGAAAGAGCTGGATAAGTTTAAAAACGGTGAATTTATAGAAATCATTGAAACAGCAACAATAGAAACCCAAAACCTCGAAGAGAACCACCGCAAAAGtatagagaaaaatttaatacaaccAACACagaagcaacagcagcaaccacAACATAACGAGCAAGAGCACGAGAGCGTTAAGGAACCTACTGAACAAGAACaggaaatagaaaaagaaacagTAACAGAAGATAATAAACATCacattaaaacagaaaataatattgaaaataaagaagTAATAGAAGATAAAAACAATACTAAAGAAATTATAACAGCATCACAATTGGAATACGAAGAAACTGTTAAtagtaacaataataattcaTCACTTAAAAGCgtcaataacaataatacagcaacaacatcagaCATCACcgttaaagatttaaaattaattaaagaatcaTCATTATCTGTTAAAAGTCCATTAACGTCATCGCCACCACCACCAGATCCCATCGATTGGAAACCGAATGATAAGTGTCATTTTTGTGTTAACGGTAAATTACTCACAGTGAACGCTAAAGGAGAATTAGTGGCCGAATCTGGCCCTACCGGGTCTGAAACGGACCACATACAAAAATTGGATTGCGAAAGTGATTCAAACGAATCCTCATCCGTTGCCGCCAATACAAATGGTAATTTACCATTAATGACTGGTACCACCGAGTCATTGACGGAAAATAATCGTGTAAGATTAAATAAGTTACTAACGCAAAAAATGGCCTCAATGGATTCAGTGGCAGCACAATTTGCCGCCATACAATCAATATTACCAAATTTCAATTGGAtgaatcaacaacagcaacaatctCAACCAGATTCGGTTACACCAACTACCTCAGATACATCAGCCGCCGCAATAAGTCCCTCTCTAAAGGATTCACCAAGTCCCAGTGATGCCACCGGTGAACAGCCTTTAGATTTAAGTTCCAAACCGTCTCCAAATTCATCAGTTAGTGGTGATTTGAAGAGTGTTAGAATAAAATCATCACGTGCTACACCGGTTCCTTCAACACGTCGCACCTATAGTGAAGAAGATTTAAATAACGCTCTACAAGAAATTCTCTCCGGTAGACTGGGCACGCGCAAAGCGGCCGTACAATTCAATGTACCTCGTTCCACGCTGCGCAACAAGATATACAAACTAACAACTGAGGCGAAACGTAATAACGAGCAAGCTTCGCCTGAATTGTTACAGTTGCAGCAAGAACTCGAAAAAGAGATGTCCGGCGATGAAGAACCAGAGGTGGAGAGTAATTCATCAACACCTCAACCGGATGATGTGGTCGTAACGCGTATTTCAACACCAAATTTGCTGAAAAAAATATGCATCAATAATGGTGAGGGCTTGGAAGTTGGTAGTCACCCAGAGGATCAAAACTCTATGTTACATGTCTCACCCAAACCAGCTCATGTGGAATCCTCGAAACCTCAAACCACGGAAGGACTACCTGAACATAATACCCAAGCCCAAATAACAGCATTGGATGCCGCACTACCGCTACTTTTACAAACTCTCCTGCTGTCCGATAAAAATCTAAGAGATGTCTTTAGTGCTCTGCTTCTCAATTCCACCAATAATTTGAAGGACATTTTGTTGGGAGCTACAACAGCTGCTAATAGTGCTGCTGCGGCTAGTGGTAGTGAAAGTAATAGCCTTAATAATGGAAATCAACAGCAGGACTACCGTCCACTCTTACAGATGTTgttgcaacagcagcagcagcaacaacaacagcagcaaccaaCATCGTTTGTTAGCGGTCGGCGCCTACCAAAGTCTGATACACCTGAAACGAACTCATCACTGGATCCGAATGAGGCCTGCGATGACCCCTCGGCGATATTGAAAATTCCGTCCTATACTCCAGTGGCTGGACCTTCCAACTCCATGGGTCCCAGCAGTTCGCGTGGTTCCCCAGCATTAGTGTGTCACAATAGCAACAGCAACTCGAATCGAAACGGCGATAGTCCTGGACCTTTGCTGCTGGCGGCAGCAGTAGCCCAAAAATTAAGCAGTAAAAACCTCTCAGTAACACCCCCTTTACTACACGCTGGAGTCGATAACCAGTCACCACAGTCTTTGCGCATAAGTGATGTCATAGCCAATAGCATACATCGCACGATGAACGAGCAAGTCAACAAGGAGGCAGTACATCCTAGTTCTGTTTCTCTGCTGGGCTATGGTGCGAACTCTGAACGCAATAGTGTGGGGTCCATGTCGACGCCAGGCGATTATAAGAAGCCCACCATATCGGTAGTTAAGAATATAGGCGGCACGGACACCTCACGCTTTGGTACAGCACCAAACCTGTTAGCAGCAGATCTGGTGCAACACCATCATCACTCTGCTCATTTACAACATGCCCACCATCTCAGTCGCCAGGAAGCGGCCGCTCTGGCCGCTGGTAAAGGTACCCGACCCAAACGTGGCAAATATCGTAACTACGATCGCGATAGCTTGGTGGAGGCCGTTAAAGCAGTGCAGCGTGGTGAAATGTCGGTGCATAGAGCTGGTAGTTATTATGGAGTTCCACATTCGACACTAGAGTACAAGGTTAAAGAGCGCCATCTAATGCGACCGCGCAAACGGGAGCCCAAGCCCCAACAGGGCTTAGACGGCAGTAGCAATAGTTCAAAAACAAATGCCAACATTCCTGCAGGACTAACGGGTCTTGATAAACTAAAGGCCGGAAATGGTGGCGCCAATGCCAATTTGAAATTGGGAGGTGCCGGCATGAAAAACAATGGAGGCACTGGTGCGAACGCATTTCCGGGTAATGCCGCAAATGGCATGAAACTGCCAATATTCGAGCCCTCTTTAGCCCATTTGCAGTATGCATCACCTATCTTTTGGCAACACAACCAGGCGGCGGCATTCAGTCAGCTTCAAATGGATTTCAACCGCAATAGCACAGCGCCTTCAGCCACCTCACCAAATGAAGCCAACAGTGACATACTCAAGAATCACATGCAGAGATATCAAGATATGACGGGCGGGGGTGGTGGTGGTGCTGGCAGCGTAGGTGGTAATACCACAACAAACTCCTCCAATGGTCCCAGTCCGGTATCGAGTCCCATACTATCGGGTCAAGATATCAATAGAGCGCGAGAGCTATATGAAAGTAATGCGGCCAATGGAGCTTCATTTCTCGACGGCATTATACGCAAATCCCTCGATCGCAAAAGTAATGAAGTGAATGCGGCCAGTACCAGTACATCTGGTGGTGTGCTGCTGGATCAGTTGCTGATGAAAAAGACTCCTCTACCATTTACCAACAATCGTAGCAACGAGTATAACTCACTATCACCCTCTCACTTAGGAGCCATCAAACGTTCGGGAAGTCCACTTTCACTTAGTGGAACATCCATTAAACGAGAACGTAATTCGCCTCACAGCGGCCCAGctagtgatgatgatgatgaaactTCCCAGAGTGGTGTGGACGAGAGCTACgagaataataacaacaaaagcggTAACGGTGGCTTGAAGAGCTCATTGAGCCAGCGCAGTCGTTTAGGTTCACGAGACTCCAATTCCGAAACAGACAACAGCAGTTTGAAAAGTGAACTGCAGCATCAACATCAGGGACATCACAATAATGGCAACAATGCCATCAATATGCTGGATATAAATGGAGTTGGAGTTGGTGGCGGTGGAAGCAGTAGTTGTGGCGGCGTTAATGTTAAAACCGAAATTCCTAACCTCGAAACGGGCACCTCTATACTACAAGAGAAACTCTCACAAATCAAGGCCGAACAGCAAGAGAGCGAGGAAAACTTATAG
Protein Sequence
MQAAVKKGVSVNSICICLERVAEELMGRRKWKQYQETLMRTHLNSDQFVASIEDNNIELKKELDKFKNGEFIEIIETATIETQNLEENHRKSIEKNLIQPTQKQQQQPQHNEQEHESVKEPTEQEQEIEKETVTEDNKHHIKTENNIENKEVIEDKNNTKEIITASQLEYEETVNSNNNNSSLKSVNNNNTATTSDITVKDLKLIKESSLSVKSPLTSSPPPPDPIDWKPNDKCHFCVNGKLLTVNAKGELVAESGPTGSETDHIQKLDCESDSNESSSVAANTNGNLPLMTGTTESLTENNRVRLNKLLTQKMASMDSVAAQFAAIQSILPNFNWMNQQQQQSQPDSVTPTTSDTSAAAISPSLKDSPSPSDATGEQPLDLSSKPSPNSSVSGDLKSVRIKSSRATPVPSTRRTYSEEDLNNALQEILSGRLGTRKAAVQFNVPRSTLRNKIYKLTTEAKRNNEQASPELLQLQQELEKEMSGDEEPEVESNSSTPQPDDVVVTRISTPNLLKKICINNGEGLEVGSHPEDQNSMLHVSPKPAHVESSKPQTTEGLPEHNTQAQITALDAALPLLLQTLLLSDKNLRDVFSALLLNSTNNLKDILLGATTAANSAAAASGSESNSLNNGNQQQDYRPLLQMLLQQQQQQQQQQQPTSFVSGRRLPKSDTPETNSSLDPNEACDDPSAILKIPSYTPVAGPSNSMGPSSSRGSPALVCHNSNSNSNRNGDSPGPLLLAAAVAQKLSSKNLSVTPPLLHAGVDNQSPQSLRISDVIANSIHRTMNEQVNKEAVHPSSVSLLGYGANSERNSVGSMSTPGDYKKPTISVVKNIGGTDTSRFGTAPNLLAADLVQHHHHSAHLQHAHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQGLDGSSNSSKTNANIPAGLTGLDKLKAGNGGANANLKLGGAGMKNNGGTGANAFPGNAANGMKLPIFEPSLAHLQYASPIFWQHNQAAAFSQLQMDFNRNSTAPSATSPNEANSDILKNHMQRYQDMTGGGGGGAGSVGGNTTTNSSNGPSPVSSPILSGQDINRARELYESNAANGASFLDGIIRKSLDRKSNEVNAASTSTSGGVLLDQLLMKKTPLPFTNNRSNEYNSLSPSHLGAIKRSGSPLSLSGTSIKRERNSPHSGPASDDDDETSQSGVDESYENNNNKSGNGGLKSSLSQRSRLGSRDSNSETDNSSLKSELQHQHQGHHNNGNNAINMLDINGVGVGGGGSSSCGGVNVKTEIPNLETGTSILQEKLSQIKAEQQESEENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00900502;
90% Identity
iTF_00922024;
80% Identity
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