Lcup007121.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- kn
- Assembly
- GCA_001187945.1
- Location
- JRES01000319.1:194510-230474[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-235 1.4e-231 769.5 0.0 10 385 19 410 10 413 0.98 2 2 3.2e-09 4.6e-05 21.6 13.3 422 504 413 502 410 514 0.71
Sequence Information
- Coding Sequence
- ATGTTTGGTCTGCCACCTACAGCGGCGGATATGAATCAACCACGCGGACCCATGACCTCGCTAAAAGAAGAGCCCTTGGGTGCCAGAGCCTGGATGCAACCTGTCGTCGATCAAAGCAAtttgggCATTGGTAGAGCTCACTTTGAAAAGCAACCGCCCAGCAATTTGAGAAAATcgaattttttccattttgttatTGCTCTCTATGATCGTGCTGGACAACCCATTGAAATCGAAAGGACTGCATTTATAGGATTTATTGAAAAAGATTCTGAATCAGATTCTACGAAAACTAATAATGGAATACAATATCGTTTACAATTACTCTATGCAAATGGTGCCCGCCAAGAACAGGATATTTTCGTCAGACTAATAGACTCtgtaacaaaacaaGCAATTATCTATGAAGGACAAGATAAAAATCCAGAAATGTGCCGTGTTTTATTAACACATGAAGTTATGTGCAGccGTTGTTGCGACAAAAAAAGTTGTGGAAACCGCAATGAAACACCATCAGATCCTGTCATTATTGATCGATTTTTCCTGAAATTCTTTTTGAAATgtaatcaaaattgtttaaaaaatgctgGAAATCCTAGAGATATGCGTAGATTCCAGGTTGTCATTGCCACTCAAGTGAGTGTGGAGGGTCCTTTGCTGGCGATTTCGGATAATATGTTTGTGCATAATAACTCCAAACATGGTCGTAGAGCCAAACGTTTGGATACAACGGAAGGTACAGGCAATTCCTCTCTGTCCATAACGGGACATCCCTTAGCGCCTGACAGTACCTATGATGgtTTATATCCACCGCTGCCTGTTGCCACACCCTGCATTAAGGCTATATCACCGAGCGAAGGCTGGACCACTGGTGGTGCTACTGTCATTATTGTGGGTGATAATTTCTTTGATGGTCTGCAGGTTGTATTCGGCACTATGCTGGTATGGAGTGAACTAATAACATCACATGCCATACGTGTGCAAACTCCGCCCAGACATATACCCGGTGTAGTCGAAGTAACATTATCCTATAAAAGTAAACAGTTTTGCAAAGGTTCACCCGGccgttttgtttatgtttcCCTTAATGAGCCTACTATTGATTATGGCTTTCAACGCCTGCAGAAATTAATACCACGCCATCCTGGCGATCCCGAAAAATTgcaaaaggaaattattttaaaaagagcaGCTGATTTGGTAGAAGCTTTGTACTCCATGCCTAGATCGCCCGGTGGTTCAACCGGCTTCAATTCATATGCTGGCCAATTGGCAGTGAGTGTACAAGATGGTAGTGGCCAATGGACCGAAGACGACTATCAAAGAACCCAGTCAAGCAGTGTTAGTCCTCGAGGCGGTTATTGCAGCAGTGCTTCTACACCCCATAGTTCGGGAGGCGGTTCTTATGGTGCTACAACTACGGCAGCTACAAATGGTTATGGTCCTACACCAAATATGGGCACATTATCCTCTTCACCCGGCAGTGTTTTCAATTCCACATCAATGTCCTCAACCTGGCATCAGGCTCTGGTACAACATCATCACTCGCATCCACACCACTACCATCATCCGCATCAGCCTTGGCACAATCCAGCCGTTTCAGCAGCCACAGCGGCCGTTTAA
- Protein Sequence
- MFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRTQSSSVSPRGGYCSSASTPHSSGGGSYGATTTAATNGYGPTPNMGTLSSSPGSVFNSTSMSSTWHQALVQHHHSHPHHYHHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -