Lcup009781.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- -
- Assembly
- GCA_001187945.1
- Location
- JRES01000027.1:284497-344218[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0078 16 5.7 0.0 35 82 259 306 225 310 0.75 2 4 0.0026 5.3 7.2 0.0 49 82 602 632 573 633 0.82 3 4 0.021 42 4.3 0.0 47 82 860 894 835 896 0.83 4 4 0.0084 17 5.6 0.0 32 82 1336 1394 1322 1397 0.67
Sequence Information
- Coding Sequence
- ATGTGGAACCATTTGCGTAATGCTTATCGAGAGGGTAAAAAACGTTGTGGCCAGCGCATAAGTAAGGATAAAGTTATGGGTTCATATGATCCAGAAAATAAGTATTACGCCAACACGTATGAGTATGCTAAACAAatgaattttctcgaaaatataggcaaaacgaaaaaaaattatgaaataaaatttcagcATGATTCTGAAACAAAGGAATTACACTtATTCTCAATAAGATCTACAAGTCCAACACGTCAGGAAAGTGAAGCCAAATCATGTTCGAGTGATAATGAACATACACAATTTATGTATGATGATACTGATACTGTTCGTATAAAACCAGAACCTTTTAATGAAATCGAAATGGAAACATATAATATGGATCATGatgaaaatatttctgaaaactCCAACATCTTAAATAAACGTACAAAAGATGAAGATGAATTTATATCAAttcctataaaagaaaataataactttacTGCTGAACCTTCGGCGAAGGACTTTATAAACGATCctgattataattttttaataagcttTTCATCACACATGAAACTAATGACGCCATTGCAAAATCTTCTGTTTCGTAACAAAATGTCGGATTTGATATTTAGTTTTCTAAAGTCTTCCAATTTTGTTACTGAAACAGCTAAGTCTGTTAATAATATACAACTGAAAGCTTTTGTTGATGTCAGAGATTCAGATAttgaGCGAGAAATGTCAAACACAATGGACCGGCTAAAGTTAATCGCTGAAATTCGTAATAGACCACAACTGTGGAATATGCTGAGTAAAGAGAATAGCTCTCGTATATCTATTCAAGATTTGTGGAGAGAAGTTGCAACGAGTATGGGACCAGATGtTACCATAGAGGAATGCAAGCGTATATGGAAGAACTTACGTGATGCTTATCGAGCTGAAGTTAAACGTATTGAACTACGTATAGAAAGGGACTTACTAAAGGGTTCATATGATCCCAATAATGAATATGGCAGTAAATGGACTTATTTTGAACCCATGCAATTTGTTAAACACTTTAAAAGACGCCGACGTAGTAGAACTTATAAAGCTATAGATTCTCCCACACACCAAGCAGTTAATGAAGTTAATATTGATAATGATGATTCCGATCAATTCTCGCAATTTCATAATATGGATAATATTAAAATGGAACCTGATGTTGAAATGGATACAGAAGTCTTTTCActagatgatgacgatgatgatgatgacgatgaaggCGGCAATTATAATCAATTGTATAGCGAACATCTTTTGAAACAAGCGGCACAACAAAACTCATCGCAAAAGCAACCAGAGGCAAAACCCTCAACTACACCCTTTAAATGTTCCAAACGTTCTTACGAACAGGTTCATTTTTTAGAAGATCTtgaaaaagaagaacaaaatcTAATGAAATCTACACGTTTGGATATATCACATTCAAATGATTTGGCTCATGTTGGCGATTcagattataattttttggttaGTTTTTTGCCTCAAATGAAAAAGATGACCGAATTACAAAACTTACAGTTTCGTGCTAAAATGACTAATTTAATGCTTGAAATTATGTCCCCAACCATGTCGGCAGCAACAGCAGCCCCTGTTTCttcctcctcctcctcctccCATTGTGCAAATAAGGTGATTATTCGTTCGTTATATTTTAACGAATATTATAACTCAGTTGTGTCGGAACCATTAAACACAATGGACAAGCTACGTTTAATTGCTGAAGTTCACAAGAGACCCGTATTATGGGATACTCAACGTTTAGATAGGTCACGTcaagaaataacaaacaaatggaATGATGTTGCCACTAGCATGGGTGGTAATGTGACGGCCTGTAAAAATACATGGAAACATTTGCGTGCTTGTTATCGTGTGGGTAAAAATCGTTCTATACGTCGTATATGTAAGGATAAAGCTAACGGTACATACGACCCCACTAAGAGAAATTACCGCAATACGTGGGAGTATTCGAAGGAAATGAACTTTCTCGAAAAGGTTATTAAAGCGAAAAgaacatttgaaataaaacttcTAGATGATTCCGATGAAGAGGAGTTACAGTtGTTATCAATGAGATGTACATATTCAAAACAACCGGAAAGTGAGGCTCCATCATGTCCCAGCGATAATGAAAACACTCAATTTATTGATGAtgataatataaaaatagaagaaGAATCTGATAATGAAATCGATATGGATGATGAAGAATTTTTATCAATGcctattaaacaaaacaatagctTATCTAAAGGAGCCTCAAACCAATTCCTTGACGATCtagattataattttttgattagTTTTAGCGCACAGATGAAATTAATGACCCCAATACAAAATCTACAGTTTCGTGGTCAGATGACAGATTtgatattaaatattctaaagatAGGTCATTCGTCTAATGACTCAAAGGCACTGGAAAATATTGTCCAACTAAAAGGTTTTGTTGATATTAGCGATTTAGATCTAATGGACAAATTTCGTTTAATCGCTGAAGTGCACAAAAGACCCATATTGTGGGATTTGCAGCTGACAGAGAGGCCGCTACATGAAATATGTGATAACTGGAAAGAGATTGCAAAAAGTCTTGGTGATGATGttaCTGCAGAAGATTGCAAAAGTGTATGGAAAAGTTTACGTGATGCTTATCGGGTAGTTAAATATCGTAAACGAAATCGTATGAAAAGAGATCAGCGAAGCGGTAAATATGATCCTAAGAAGGATTATAGCAGTAAGTGGGTGTATTGTGAACCCATGAAATTTTTAGATGGTCATTCCAAGTGTTCAAGGGATAGCGATTCCGATCAGAGTTCAAATTTGGCAATAAcggaaaataacaaacattctattattaaaaatcaaagtgAACTAAGAAGAGATCGTAGGAAACGGAATTCTTCCATAAATGATGATAATATATCATGTAACAGTAGTCTCTCAAAAACTGTACCCAATGAAATAGACTTGTTAGACGATTCTGATGAAGAAGATTTGTTAAAGCGTCTGAAATCCTGCGAGGAATATAATGAAAACGATGAAAGTAAAGTATCGTATACTAAACAAAATCGCAATGAAATTAAACGTAAATCGCCTAGGCGTCAAAGTCGCTTAAACAAGAGTTTAACACCCGAGCAAAAAACTAGTAATGTCACAAATGAAAATCCTCTAAAACAGAAATGCCTAAATGAAAGTGAATATATACCATCGTACAGTAGTAAACCGCAAAGTTCTTactatcaaataaattttttagatgAGACTGATGAGGAGGAACCAATAATAAGATCACAACATAATCAATTTGCTAATGCTGATATAAAAGAAGAACCAGCTCTTGATATCGAGACAGTTTCGCATCcctttttagaaaatgaaattcAATCGCCTAAGCTTCAAAGTCTGAATGAGAGTTCAACACTTCAGCAAAATGAAGTTCATTCAATTCAACCTCAAAGTCTTGCTAAAAATTCAACACTTCAGCAAAACCGAAAcataaaagacaaaaacaaacgaataacattaagaaaagaaattaacGCTAGCCAAGATTTCCGACTAACCGCTCAGCAAGATATTGGCGATCCAGATTGTAATTTTCTGATTAGTTTTTTGTCGCACATGAAATCATTAACagctttacaaaatttacagttTCGTGTTCAAATGTCtgatttaatattaagttttctGACTAACTCTTCTTCTGCTAATGAATTTAAAACGCCAGAATGTAACGCCAAGATAGCGTTAGATATAAGAGATCcagatttttcgttaagtttttttttatttctcactGCCGCCAGCAAGTAtttgagtgtgtgtatgtgtgtaaatttaTTCGTTGTATTTCGTTGtcgctttgtttgtttttcgtcTTTTCGTTCGTTTTTTCGTCTtagcaaatgcatgtttgtgcTCGAAACATTGCTCAACGATAAAAGTTTAGTTGAGCGAAAAATTTCAAACGTAATGGATGTACATCGTTTAATCGCTGAAATACAAAATAGACCGGCTTTGTGGGATGTGAGGCATGGGGATCATAAGGCCCGTCATTGTATTAACAAATTATGGCAAGAAGTTGCGGAAGAAGTAGGGGCAGATGTTGATCAATGCAAACGCAAGTGGAAAAATTTGCGAGATGCTTATCGTGCTGAAGTTAGACGTTCACAGCGTCGTATTGAAAGAGACAAATTAACTGGTGACTATGATCCCAACACAAACTACAATAGCAAATGGGCCTACTTTCCCAGTATGAGTTTTATCAGTGATAATAGACTCAATAGttgttataatattgaacttgaAAATAGCAGTTCAAATTCCAATGATAATAACCAAGACGATATAATGGAACACCAGCATTACAATGACAGCATGTATAATGATAATTTTCCCAATGTTTGCAATATTAAGCAAGAACCCTTACACAACGATATGGAACATAAACTACATAATTTGCACGATGGATCACGCCTAGTCGATGAAGGCGATGATGATACTGCCAATGATATGCTTTTTGAAGAGTTTCAAAATATTGCCACACCTCAAGCGGCTCGACGATTATCGGAAACATTGTCTTTAAATCAATCGCCAGAACAACATTTTCCTTCAACACATGATAATCGTAAGTCCAGTACCTCAACACCTCACAACTGTAAATGTTCGCAACGCACTGAGGATCGTGTTCATTTCTTGGAAGATCTTGGCAAAGAGGAACAAAAACTTATGAAATCCACAAGACAAGATATAACTCGTGCCAATAAACTAGATCATGTTGGTGATTCGgattataattttttggcaAGTTTTCTACCTCAAATGAAGAAAATGTCAGAATTGCAGAATCTTCAGTTTCGTGCTAAAATGTGTGAGATGGTATTAAATATTATGACACCAACGACAGCTGTAGTGGAGTACAGTAACGCTAACGCAATGGTGCCAACAACAGATGCATCACTTCAAAATACGGGCAATATGCAAGATTctatgaataattaa
- Protein Sequence
- MWNHLRNAYREGKKRCGQRISKDKVMGSYDPENKYYANTYEYAKQMNFLENIGKTKKNYEIKFQHDSETKELHLFSIRSTSPTRQESEAKSCSSDNEHTQFMYDDTDTVRIKPEPFNEIEMETYNMDHDENISENSNILNKRTKDEDEFISIPIKENNNFTAEPSAKDFINDPDYNFLISFSSHMKLMTPLQNLLFRNKMSDLIFSFLKSSNFVTETAKSVNNIQLKAFVDVRDSDIEREMSNTMDRLKLIAEIRNRPQLWNMLSKENSSRISIQDLWREVATSMGPDVTIEECKRIWKNLRDAYRAEVKRIELRIERDLLKGSYDPNNEYGSKWTYFEPMQFVKHFKRRRRSRTYKAIDSPTHQAVNEVNIDNDDSDQFSQFHNMDNIKMEPDVEMDTEVFSLDDDDDDDDDEGGNYNQLYSEHLLKQAAQQNSSQKQPEAKPSTTPFKCSKRSYEQVHFLEDLEKEEQNLMKSTRLDISHSNDLAHVGDSDYNFLVSFLPQMKKMTELQNLQFRAKMTNLMLEIMSPTMSAATAAPVSSSSSSSHCANKVIIRSLYFNEYYNSVVSEPLNTMDKLRLIAEVHKRPVLWDTQRLDRSRQEITNKWNDVATSMGGNVTACKNTWKHLRACYRVGKNRSIRRICKDKANGTYDPTKRNYRNTWEYSKEMNFLEKVIKAKRTFEIKLLDDSDEEELQLLSMRCTYSKQPESEAPSCPSDNENTQFIDDDNIKIEEESDNEIDMDDEEFLSMPIKQNNSLSKGASNQFLDDLDYNFLISFSAQMKLMTPIQNLQFRGQMTDLILNILKIGHSSNDSKALENIVQLKGFVDISDLDLMDKFRLIAEVHKRPILWDLQLTERPLHEICDNWKEIAKSLGDDVTAEDCKSVWKSLRDAYRVVKYRKRNRMKRDQRSGKYDPKKDYSSKWVYCEPMKFLDGHSKCSRDSDSDQSSNLAITENNKHSIIKNQSELRRDRRKRNSSINDDNISCNSSLSKTVPNEIDLLDDSDEEDLLKRLKSCEEYNENDESKVSYTKQNRNEIKRKSPRRQSRLNKSLTPEQKTSNVTNENPLKQKCLNESEYIPSYSSKPQSSYYQINFLDETDEEEPIIRSQHNQFANADIKEEPALDIETVSHPFLENEIQSPKLQSLNESSTLQQNEVHSIQPQSLAKNSTLQQNRNIKDKNKRITLRKEINASQDFRLTAQQDIGDPDCNFLISFLSHMKSLTALQNLQFRVQMSDLILSFLTNSSSANEFKTPECNAKIALDIRDPDFSLSFFLFLTAASKYLSVCMCVNLFVVFRCRFVCFSSFRSFFRLSKCMFVLETLLNDKSLVERKISNVMDVHRLIAEIQNRPALWDVRHGDHKARHCINKLWQEVAEEVGADVDQCKRKWKNLRDAYRAEVRRSQRRIERDKLTGDYDPNTNYNSKWAYFPSMSFISDNRLNSCYNIELENSSSNSNDNNQDDIMEHQHYNDSMYNDNFPNVCNIKQEPLHNDMEHKLHNLHDGSRLVDEGDDDTANDMLFEEFQNIATPQAARRLSETLSLNQSPEQHFPSTHDNRKSSTSTPHNCKCSQRTEDRVHFLEDLGKEEQKLMKSTRQDITRANKLDHVGDSDYNFLASFLPQMKKMSELQNLQFRAKMCEMVLNIMTPTTAVVEYSNANAMVPTTDASLQNTGNMQDSMNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -