Lcup008119.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- JARID2
- Assembly
- GCA_001187945.1
- Location
- JRES01000215.1:3044-12104[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-22 7.1e-19 67.7 0.0 6 89 1912 1993 1907 1993 0.92
Sequence Information
- Coding Sequence
- ttaataGCTTCAACAATAATATCTCATTTAActatattctattttaattttcacagAACTAAAGTTCAAGCTCAACGCAAGTTTGCACAGGGACAAAGTGCACCGCAATCATCATATAGTTCCATTATCGCAGCTTCATCCTCATCTAATACTGGCCCAAGTACTTCATCAGAGAGTCGTGAGCCACCAACGGAGATTTTGCCTAATAAACGGCCAAAGACAgaagattttttaacatttctctgCTTTCGTGGTTCCTCGGCTTTGCCACCACACTTGGATTTTCTTAATCAGGGTAAAAGTAAAGAACCTGAAAGACCCACAAAAAAGCCGGCTATTAAACCAGTGATTAAGAAGAAAGGGAAGAAAGGCCGACCACCTAAGaatgctaaacaaaaagaagagaATGTAACGGCTAAAGAAGAAGATATTGAGccaaataaaaaagatgaaGTCGTGCAAGGTGAAacccaaacaaaaatcattgaaaaagaagaacaaaataaaaatcccgAAAAAGTACAAGTTAAAGTTGCAGAAGGGAATGTCGCGGATGAGGAAGAAGACAACGATGTACCCACTTTCGCTGTGCGTAAAAGAGCAGAAGTTGTAGCTGATGGCAATCGTCGCAGTAACCGCAGTAACACTGAAGAAAAGTGCAATAATTCTACAGAGACTTCAAAAAGGCGATCAAATCGTGCAAGTACAAAAGGATCAAAAGTTATGCTTGATCATCTATCAGATGATGAAGATGACGAATACTTCTCGGCGGTCGATGAAAACAGCAAAGCTCTTAATTCGGACGTAGATGGtaaagaacgaaaaattacAAAGACTCCTGTAAATTCAGAAAGAAAATCTGAAACACCTTCAAAAGAAAGTGAAACTACAGGGAAATCACGAAAAGGAAGGCCTACTTCAACCAATAAGAAAAAAGAAGCAGAGAGCAGCAAAGAGACAGAAAAAGCAGAATCAGTTAAATCTGACATTAAAGAGAAAGTCCCGGTAAAACGTCCAAGACAAAAGGAATCACCAATTTTTATACCTTCGCCAGAACCATCTGGACGTATGACTAGACAAAGAGCATTTTTTGAGCCCGTTAAGGTTCCTCATAGAGATAATGAAGACACCCaggatgaaataaaaaaagatgatGTAGAAGAATCAGTTGAGAAAGTTACTAAAGTCAAATCAACAGACAATACCACTGATAAAGTCAATGAAACATTAAAAGCAAAAGCTACCGATAAAGATGAGAAAACTATACCAAAACAACCGGTTGTCAGTGATGATAAAAACAAACCAACGCAATTAGATGTGTTTGATTTTTCTTCTGACGATGAACAACCTTTGgctaaaacaatcaaattaaaaaagactGGATCGAATAAATCAAGTCCCAAGAAAATAAACTCTCGTGGAAAAAAGCCTccaccaaaaaaagaaataattgaagaaaccaataaaataaatgaaaaagaagaaataaaaacccAGCTGCGTGAAAGTGATAAAAAGGAAGCTGCGATTACGGAAACCATTATGCCGCCAAATGAAGACGAATCCCCAAAACCAAAGGGAAAGCGTTCTGTTGGTCAAGCAGCAAAGAATTTGAAGAAGAAGGAAAATGATGAAGTCTTAAACGATATTGATAAGGAATCCACCCCGCATTCCCCTAAAAAATCAACTAACGCAAGACAGTCTCGTAAGAAAACAAAAGCCGAAAGCAATGAACATATTGTTGAAAATGAGACAGAAGATAATCAAGACAGTCCCACAAGGAATCAGAGACCATCGCGTAAAACAAAAGAAGCAGCTACTATTTATATGGGTATAATAGGACATCGGTTGCAAATGGCGgatgacgatgatgacgatATTTCTCTAAGTAGTTTCGATCGACCAAATGTCCGTGAAatggaaaaaatggaaaatgaaCTAAAACGAAATACAACGTCAGTAGGAAAAGGATCGCCACCGCCGAAACAGTCGAAATCAGCAGACGTACCTCAGCACACAGCAGCTCCAGTTTCAACAGTAGTTGCTGCTGAATCAAAACCATCGACAACAGGTCGTCGAGGTCGCCCGCCTAAAAATCCGAAAATACAACCACTTGTGCAGCCCCCAAAACGAGAAATCGAAGGGATGCTCGTAAAGAAAGGCGCTATTGCAAAATTGACGCAATCCACGGAAAACTTATCTGAGGTCAAAGACAGCAAAACAGAACCCTCAAAAGCAGGCACTGAGGATGATGAAGACTTTCTCTTAAATGAAGAACTTAACGAAACAAAACGTAAACTAGAAAAAAGTTTCAGTGATTCTGATGATGAACCTCTGGCAATAAAAGCGCACGTGAAAACTGGAGAAAAAGATGAGGAGGATTCTCCAAAGTCTGCGGGCGTTGGTGAGTGCCTATCACCAACAACTTTACCAACAGTGAATCCTCCAGTTTCAAGTGGCGGGGGATTAATCAGTCTCTCTATGCTACCATTAACTACCAAATCTATTACCACCACAAATACCATACAAGCTCAACTAACTCCACCATTAACACAAACAGCACCTGTAACGACATGTGGTGCGTCGACTACGGCATTAGCAACATCTTCAACAATTGGCGGTATAATGGGGACAACCATTACTTCACCAATAACATGTAATATTCAGCCTCCAGCTCCGATTACACCTACATCACAATCACCATTCAAAAGTATTGAAAAGAAATCGCCCATACCAACTTCGAAGATTTTAAATGTGCCAGCAACATATGGCATCCCTCCTGCGTCGCCCACAGGTAATATTGCAGCTGGTATCAATACAAATTTCGGAAAATCGCCCATGTATGTTCCACAATCTCCAGTCCACTATCATTCATCACACATACGGCCAACTTCAAGTTTACCACAATTTCCCGTGCAATCTGTAAAGAATCCCTCGCTTGTGGCACCTCCCTCAAATACTGTCACTTCTCATCTGACAACTCCTCCATCACAAATGACGGCTCAGTCGCCAATAAAATATCAAACTCCTCCAACTACATATCCACCACCAATCGAGGCATATCCCTCGCCAAAAATTAATCCCAACTTTTTAACGCCTAAATTTGATCGAAATACTCTATCTCGACCTGGTAATAATACTGGAAATAATAATGCTTTTCCCTCACCTTCGCCAGTGAAATTTGATATGTCTGGTTCAAGCAGTGGTCTATTGAAGAACTCGTCCCTTTCGGCTCCGAATGTAGCAATGAGTCCTAAAACGTTGATATCCAGCAACATAAACTTTATGGGAAATAATCCGGCAGCATCAACATCAGTTGCCGGGCAGGTGAGCAATGATCCCTTGAAGGACGAAATCGGAAGTATACTGGCGGCTAATTTAATGCCAAGCAAGGAAGAATCTGgaaaaatatttggtattgCCAGTGTGAGTTTGGCCCAGAGTTCTGGTCCCGATAATACAAAGTGTACTTTAGGAAAATGCGGTTCAATTCATAAACCTGTCCTAGGTCCCGTAGTTCCAACGGAGAGTTATATTGGTGATCAACTATCTGGAAAGGAGAGACGCAAAGCTAAAGTTAATATGACACACGAACAAATACATAAATGGCTAATTGAGTGTTCTTCGAATCCTGATGAAATTCAAGATGATCTTGATGATGATTTTGATTCAGACTTAAGACCAAACAACTTCAGTTCAACACCACCACCAACTCGAGATGACAAGGAGAGCACGTCATTTAGTTCATCATCAAAAGCCACACGTGATTTGGGTAAAAGTGAAAGTGCTTGGTCTGCTAAAGGACCTTCTCTTAAAGCCACCCCAGTTGTTGCTTCTACCAGTGCAATTAATAGTAGAAAGGAAGACATTAAACCTATTGAATCTACGAGTCCCCGATTAGATGAGGAGATGGAGAAGACTTCCCCGGTAATGAATTTGATATTCGACAAAACACCGGCCAACAAACAGTCACCAGATCCAGGAAGTGTAGATGTGGACGAAAAACTTACACAGTCAGATAAATCCGAGAAAAAGAATGAGAAAAAGGCTAAAGAAGATAAACCTACCACCAAAACATCAACAAACGAGGCAAAACAAAGCAAATCTGCTGAGAAGGAAACTGCTTcaactacaacaaataaatcCTTGACAGTTGCTAAACAAAATTCCAACCAAAAATCTTTGAATCAGAAGAAAACTCCATCATCTCCAGTCACAActccaacaacaacagccactTCTAACAAACAAAATCGTAAAAAGGCAGCGCCTGAGGTGGTCATAGAGGAAAAGTCAACAAATGTGAATCAAAACGATTCTGTAAATCCTCCAGAAGTTGGTAATACTAATTCAACATCAAACTCTATTAATCGTACTCCTAAGCGTACACCGGTTTATCAGCAGAAACAAACTtcaaaacagcagcagcaacatcagcagcagGAAAACACGGACCTTAAAATATCAACTACTACAAGTCATAAACGCGCGACAACAACATATGGTACCGCATTTTCCGTCGAGaatgaaaaatcaatttattcatTCGATAAAGACGACGCAGAAGACCAGGAGAAATCGAACAAACCTCCAACGTACAGACGACAGAGCAGAAAGGACTCGCATGTCGATAATGGTATTAATACAACGCCAACTGCAGTGCAGCGTACTCCACCCACGAAACCAAAGCGAAATGCTGCAGCTGTTGCTGAAATTGCCAATAAAGAATTAGCTGGAGGTAATTCTCAAACAAGTTCAGTTTCATTGACTTTAAGTCCATcggaaaaaacaaaattggttAAAGTAAGCCTTGATGGtgataaaactacaacaaaggCTACAAAGGGAGGAAAAGGTGGAAAGAAAAACATTCAGAGTGAACCAAAGCCGCCGGCAAATGACGCTGAATCAGATTCAGGGGATGGCCATACATTCTACATACCATTACAAGGCGTTGGTACTGGTGGTGATGGTGACGGTGGAATTCAGGGAGTGGCTGTCAAATTGGGCCGTGAAGGACCCGATGGTCCCAATCAAAAAGTTATTATGCATGCTACGCTTGTGACTAAGGCTCAAATGGGATCTAACACTAAACCACTGCCAGATACTATGAACGTCTCAGATATCGTAAAAAACTTAATGACGAGCGACAAGAAAGTATCAGGTGCATCTACTTCAGCCGCAGCAGCAGCGGCCACAAACTCATGTTCGAATAGTTTAAAGAATGTACCAATTGGAACTGTGCAACCACGATTTAAAGGAGATTCAGCTGTTCAAGGTCCATCTACATCTGCTGGCGGAGGTGGTGGCAGCGGTGCTTTACAACGTGTCAATTCGAATTCTTCTCTGTTTTCCGGTTCAGTTAAATCGCGCAAtgctgcagcagcagctgctgcagGTGCTTCTGGCAGCGGTACAGGTGGCCATAGTTcgaataaaaagtttaaagacgACACTCCCATAAAAATGGCTAATAACACAGCCTTCCCTCGTCACGATGACCCCACACAAATGGTGGAAGCTCCTATTTTCCGGCCCTCTGAGAAGGAGTTTGCAGATCCCATTGAATTTATAGAGCGTATCACGCCCATTGCTGCTAGATTTGGCATCTGCAAGATTATACCACCAGCTTCCTTTAAACCTGAATGTCGCATATCCGACGAAATGCGCTTCACGGCCTACAATCAATATGTGCATAAATTATTACACCGATGGGGTCCTAGTGCAAAAGAGTTAAGTGCAATTAAAAAGTACTTAGCCACTCAAAGCATAGTGATGAATCATCCACCCTGGATAGGTGGTATGGAAGTAGATTTACCACGCCTATATCACACCGTCCAAGAGCTGGGTGGTCTGAAGGAGGTTATTGAGAAGAAAAAATGGGCCCGAGTTGCTGAAGAAATGTGCATTCCTAAGCTGGCGCAGGATCGCGTGACCAAATTAGAtgatatttattgcaaatactTGCTTCCATATGATACACTCTCGCCAGCCGAGCGGCAAAAACTTTTCGATGAAGTTGAAGCTGATTGGGCGAAAAGAGAAGCACGCGCCAGACGCAACGCTGATCGCTTTGTTAACACTGAAAGCGTTTCCAATGAAGAAGACGATGTGTCATCGGAGAATGACGAAGAAGAGTCTGAAGAAGAAGTCGACGGTGTATCAATGGAATGTATAGTTAAGGGGCGTAGTATGCCATTGAGTCAGTTTTATCGTATTGCACGGAATACAATGGCTCTCTGGTTTAAGAATACTGAGCCTACCGTTAATGAAGTTGAAGCAGAGTTTTGGCGCCATGTGGCCGTTCGTGATAGTCATGTATGTGTACATTCCGGTTCAATAGATTCCTCTGGTTGGGGTTTCGGCTTTCCCAGTCCCGGACCGAAGGGTAAAGGATCCAATTATGCCAGACACCCCTGGAATCTAAAAGTGCTTACAAACAACACTGGCTCAGTGCTGCGTTCTTTGGGACCTGTCATGGGTGTAACCGTACCAACACTGCATGTCGGAATGCTTTTCTCGGCCTGTTGTTGGTATCGCGACCCTCACGGTTTGTCGTGGATAGAATATTTGCATACCGGTGCCTCGAAGCTTTGGTACGGCATACCAGACGATCAAAGTGCTAACTTTAGGGCTGCTCTGACCTCACTCATTCCTACGCACTGTCAAAATAAAACCATTTGGTTACCCTGTGATACTGTTATGGTACCTCCACATATGCTTACAGACCGTGGTGTGTCGCTCTGTCGTATTGAACAGAAACCCGGAGAGTTCATCGTAGTATTTCCCCGAGCCTATACATCAAGTTTAGCAACTGGTTATGTGGTATCGGAGAGTGTCTATTTCGCAACATCGTCTTGGCTAGATTTAGCTAAAGATGACTTTAGAGACATCCATGACAGCTGCGAACCTGCTATGTTCTCATTGGAACAATTATTGTTTGCCTTAGGTTATGACCAACGTGTTACTCCTGATACCTTACAACAGATGCTACCAATGCTAAAGGAGGTATTTGAAAAAGAAACTGCTGCCAGAGAGCAACTTAAGgcTGCTGGTGTAACTTCAACGGAAAAAGTTGCGAATGAAAAAAGTGGTAAAGGTAAGAAACAACAACAGCCTCCACATAAATCCATTGAAAGCGAATGTGATCTTTGCCGTGCAAATCTTTACATTTCAATGGTGCGCACTGATGAAGGTAACGTTTACTGCCTTCAACATGCTTTGAAAAATCTCAATAATGGCAACATACAAGCCAAACAATGTAAGCTTATTTATGCCTATAATATCGACGATATTGAGAACCTCATTAAGAATCTGAaagataaaatacaacaaaaacgtgCAGTAACTGGtaagaaacaaaaatag
- Protein Sequence
- LIASTIISHLTIFYFNFHRTKVQAQRKFAQGQSAPQSSYSSIIAASSSSNTGPSTSSESREPPTEILPNKRPKTEDFLTFLCFRGSSALPPHLDFLNQGKSKEPERPTKKPAIKPVIKKKGKKGRPPKNAKQKEENVTAKEEDIEPNKKDEVVQGETQTKIIEKEEQNKNPEKVQVKVAEGNVADEEEDNDVPTFAVRKRAEVVADGNRRSNRSNTEEKCNNSTETSKRRSNRASTKGSKVMLDHLSDDEDDEYFSAVDENSKALNSDVDGKERKITKTPVNSERKSETPSKESETTGKSRKGRPTSTNKKKEAESSKETEKAESVKSDIKEKVPVKRPRQKESPIFIPSPEPSGRMTRQRAFFEPVKVPHRDNEDTQDEIKKDDVEESVEKVTKVKSTDNTTDKVNETLKAKATDKDEKTIPKQPVVSDDKNKPTQLDVFDFSSDDEQPLAKTIKLKKTGSNKSSPKKINSRGKKPPPKKEIIEETNKINEKEEIKTQLRESDKKEAAITETIMPPNEDESPKPKGKRSVGQAAKNLKKKENDEVLNDIDKESTPHSPKKSTNARQSRKKTKAESNEHIVENETEDNQDSPTRNQRPSRKTKEAATIYMGIIGHRLQMADDDDDDISLSSFDRPNVREMEKMENELKRNTTSVGKGSPPPKQSKSADVPQHTAAPVSTVVAAESKPSTTGRRGRPPKNPKIQPLVQPPKREIEGMLVKKGAIAKLTQSTENLSEVKDSKTEPSKAGTEDDEDFLLNEELNETKRKLEKSFSDSDDEPLAIKAHVKTGEKDEEDSPKSAGVGECLSPTTLPTVNPPVSSGGGLISLSMLPLTTKSITTTNTIQAQLTPPLTQTAPVTTCGASTTALATSSTIGGIMGTTITSPITCNIQPPAPITPTSQSPFKSIEKKSPIPTSKILNVPATYGIPPASPTGNIAAGINTNFGKSPMYVPQSPVHYHSSHIRPTSSLPQFPVQSVKNPSLVAPPSNTVTSHLTTPPSQMTAQSPIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNTLSRPGNNTGNNNAFPSPSPVKFDMSGSSSGLLKNSSLSAPNVAMSPKTLISSNINFMGNNPAASTSVAGQVSNDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYIGDQLSGKERRKAKVNMTHEQIHKWLIECSSNPDEIQDDLDDDFDSDLRPNNFSSTPPPTRDDKESTSFSSSSKATRDLGKSESAWSAKGPSLKATPVVASTSAINSRKEDIKPIESTSPRLDEEMEKTSPVMNLIFDKTPANKQSPDPGSVDVDEKLTQSDKSEKKNEKKAKEDKPTTKTSTNEAKQSKSAEKETASTTTNKSLTVAKQNSNQKSLNQKKTPSSPVTTPTTTATSNKQNRKKAAPEVVIEEKSTNVNQNDSVNPPEVGNTNSTSNSINRTPKRTPVYQQKQTSKQQQQHQQQENTDLKISTTTSHKRATTTYGTAFSVENEKSIYSFDKDDAEDQEKSNKPPTYRRQSRKDSHVDNGINTTPTAVQRTPPTKPKRNAAAVAEIANKELAGGNSQTSSVSLTLSPSEKTKLVKVSLDGDKTTTKATKGGKGGKKNIQSEPKPPANDAESDSGDGHTFYIPLQGVGTGGDGDGGIQGVAVKLGREGPDGPNQKVIMHATLVTKAQMGSNTKPLPDTMNVSDIVKNLMTSDKKVSGASTSAAAAAATNSCSNSLKNVPIGTVQPRFKGDSAVQGPSTSAGGGGGSGALQRVNSNSSLFSGSVKSRNAAAAAAAGASGSGTGGHSSNKKFKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPSEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKLLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSENDEEESEEEVDGVSMECIVKGRSMPLSQFYRIARNTMALWFKNTEPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGFGFPSPGPKGKGSNYARHPWNLKVLTNNTGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATSSWLDLAKDDFRDIHDSCEPAMFSLEQLLFALGYDQRVTPDTLQQMLPMLKEVFEKETAAREQLKAAGVTSTEKVANEKSGKGKKQQQPPHKSIESECDLCRANLYISMVRTDEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNIDDIENLIKNLKDKIQQKRAVTGKKQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00741633;
- 90% Identity
- iTF_00259560;
- 80% Identity
- -