Lcup005277.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- ARID2
- Assembly
- GCA_001187945.1
- Location
- JRES01000370.1:3920-11778[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-27 6.5e-24 83.8 0.0 3 89 85 169 83 169 0.94 2 2 6.7 1.4e+04 -3.7 0.1 8 32 1096 1119 1095 1123 0.75
Sequence Information
- Coding Sequence
- ATGTTACTAAACGATTCTATGAAGTCATCAAATATCTCACAGCTACAACAAAATGATGGATCTACGAATAATGCCAGTGCTACAAACACAATTGGCGTCATAACAGCCAGCACGGCTTCTGCTAGCGCATCTTCTGGAACAACAACTACCGGAACTCCTCTAAGATCAAGAAACAACAATAGAGACCGTCAGCAATCCGATGACAAACAGGATTCTAGtaatattaaaggaaaaaatccTCCTAAGCCCATGGAGGAATTTTACAAAGATCTACAACAGTTTCACGAGAAAAGGGGCACTCCCATCATGCACATGCCGAAAATAACTGGACGTCAGGTGGATCTTCATCGTTTATATTGTGAGGTCACTGAAAGAGGGGGATTTCAAAAGGTTAATATGCGTGACGAATGGGACGAAATTTTACCAGAACTGGGCTTGAAAGAAAAAATCGTAAATGGTTCTGCTGCACTGAAATATATTTATCGTCGTGTATTggaaaaatatgaatgtttaAATTACTTCGGTGAAGATCCCGACAAAGTAGATGCTTTAGCAGCTGCagaaatgaatgaatttaatatGGGTGGTGGTCGTGGTAGAGGTTCACGGCATCCCACCTCTTACAGCAGTTCAAATCCAACCATAATACACAGTGTGGCTATGTCCTACAACTATAGGCAGCATCATGTAAATATGGATAGAAGGAGACAGTTTAAACTATCCACAGATCTACACAAACCATCAccatatgaaaaattaatgttGTCACTACTCTCTCCACTACCAAACGAACAAGATTTTGCCATAAATGCCTGCACTTTAATGGCTAATGAGGCTAGACATACcttgaaattaaatgaatttccaAAATTATTAGATGCTTTATTAGCTCACACGGGTGTATTTTCTGACTATACCATGCGCAAGTTGTTTCAACACATTTACAGTGGTGTTAGGCATCATTCCTTGTATGGATTTTGGTATGATTTGCTAAGTGACAAGCCACAAATATTGGATTTATACACAGATGAGCAGACGTTGCGTGAAGCAGCTTTAATAGATGACTACGATGATGGAAAACCGGAAATGGAGGGCATTTGGCAAGATTGCACTGAATTGGACTTTTTAAATTTACGCACAGGTTTGGGTACACAGGACTATGTTGGGCAGAGGGTATTGCAAGTGGTTTCTATACTTCGTAATCTCAGTTTCCAGGAGGAAAACTTGGgcgttttagtaaaaaataaaacatttctacGTTTCCTAGTGATGAGTTCTAACATACGCTGGAGCAATGTTCACATACAGGCTCTAGAAATTGCAGGCAATATAGCTggagaattggaaatcttagaTCCTACCATAGACGACTTATCACGTTGCCTAATGGCCACAATATGTGATGGCATTGAAGGTCCTGATCGTGGTGTCATAATCAATTGTTTAGAGATTCTGTACAAACTGTGTCAGAAGGACACGAATGAGGACTATGtccttaaatgtttaaataacagCTTTTATAATactatatgtttgtttttgtctcTTAACGATATAATGATGTTACTATTCACTCTGGAAGCAATTTATGCTCTCACTTGTTTAGGTCCCAAAAGTTGTCATTCTATGATGCAGGTAAAGGGCATTGTAGACCAATTGATTTCTTTGATTACTGTGGAGGGTCAAGCGTATGGTCCGGATGGTTGTATATTGATGCGTGTTGTTGAAACTGTGCCAGCCCATTTGCTTCCCACGGTGgctgaaaatatttctaatttacaAAATGTAGCACATATGCCACAGATACTTACACCTAATCCAATGCATGTTTCTGAAATACCCGAATCTGTTGGTGAAAACATACAACAAgcccagcagcaacaacaacagcatcagacccaacaacaattacaaatgcCTCAAAATTTTACACACGACGATGAACAATACGCTTTAGCTTGGCTGGGAGCCACCTTTGAACGCGCACCTAATGTATCCAGTTTTATTGAAACACAGGAATTGTATCGCATGTATTTGTCACACTGCCAAAAATCCGGCAAGCACTCTGTAGTTAATCATTTACATTTTCCCAAATTGGTACGTCTAATTTTTACCGCTGCCATTGGACCGACTACAGTTAAAAAGGTTGATGGCACTGAATTACCTGGACTGCACTATGTGGCCATAAGGTTAAGAGCTCAACCACTTCCGTTGCAAAAGTCAAGTCTATCGGTTAGTACTGGTCCAATCTCACCCTCGGGCAAACAATCCGAAAGCCCAGGCTCCGctagaaaaattaagaaaaaaataaagcaacaaacAGAATCACCGGTATCCACAACTACACCAGCAGCACTGCCTGTTGCTGCCACTACAACTACCCCTCAAGTAACCACAAATACAGGAGTTGCCATTGCATCAGATAACCCAACAACTGCTACAAGTGTATCTGAACCCGTCAAACAAGTAGCAAATCCGGTAACCCCAATAATCAGCCAGGCAACCGTACAATCAGTGATCGAAAAGCGGCCTCTAACACCCCAACAAACAGAggagaaaaaagaagaaaaaatggaTGTTGAAGAAAAAATCGATAATCCTGCCAAATTAGAAAATCCTACACAGACAATTGTGCAAAATGTGCCAGAGCCTGAGCCCATGCAGATTGTTGATACAACTTCCGTCATTCAACCAGCAATGGCACAAAATCCATCgtctttaattaaaagtttactgGCCAATAAAGTCAATCAAAGGCAGATGAAACAAAAAGACATTACTGCTAGTTCAAATAACACAACAGCAACCACAACTTCTGTACCCACTACAACTGCACAGCCAATTAAAATGACCACTACGGCCATCACTGCTTTAGTTAATAATCCACTCATGCAGCATACACCAGTAAAAGTAGGACAAACTACTATAAAACCTCTAAATCCTCATCCTCCTATTTTGGACAAAAAGTCACAAATATCCGAATCTACACCTCCGCCCTTAGCCCCACTAAGTGGCGCAAATGTTGCTAAGGATGCCTCTGGCAGACCTATTATTCTAGCCAATCAAATGTTGGTAGATATTCTAGACAAGAAAATGGTTGATCCTCCCATACCGACTAGTATTATACAAAAACGTAAAATAGAGGACAACTCAGGAAACAACAAACGTTTAGCTATGGACACGAACTCATCTGTAACGTCTGCAAAAGAGGAGCCTCAAGTTACGCCCTCTAAAAATGCGGCCAACTTATATGCTGAAATGGCTGCTTCAATATTGGAAGATGAAGATCTTGAAGAGTTTTCTACTCAAACTCAACAACAGCCTCCACAACCACAGTTGGAACAACAGCAAATCCAGCAAACTTCTCTTATAATACCGGCCAAGGTACAGCAGCAACAGACAACAGCTGCACCTTTACAAGGTGTACAAAGGCAGTTAGTATTTCAATCGAATCAGCCACAATTAAAACTTACACAACCCGTACCAACTACCAGTCAGCAAATGCCCAATGCTATGGCGACAATTAAGACAGATCACGGCCTGCAAACCGTTCCTGTTATACTGCAACAGAAACCCATGGAGGTGCAGCAACAAGGTCAAACTCAAATCATACAACAAATGATGCAACCTGCtgctcaacaacaacaaacatatgttTTAGCCACAAATCAACAGGGCCAAACTTACTTAGTAGCCCAACAAACGCAGCCACATCCTCCTCCACCACCTCCTCAACCTACTCAAACGGTTTTGGTCACTCAAACTCCCCAACAACAGTCGACAGGACAAAAGACTATAATAATATTGCAACAGCAACCCATGCCTGGACAACAGCAGCAGATAATTACCACTGGACCTCCAGGACAAGGACAAAAAATGATAATGACCACTTCACAAGGTCAACAAGTACTGGTTACCCAAAGACCACAAACGCCACAGCAAATATTCATCAATCCCCAAACTGGCACTGCCACACACATTCAACATATGCCGATGCAAACCCAAACAAGGCAAATTATTCAAACTACTAACCcgccacaacaacagcaatcaaCTCAAATTCAAGCAGGACAAATATCACCTTCCCTGCTCAATCAGCTCAATCAAATACCAGCCACCATAAAGCTGCATCAACCAATAGCCCAACATACAACGCCTTCTCCCCAACCGCAACCAGCTACGATTACACGCATGGCCAAAACCGTTTCATTAGTTCAATCATCCAACACGCCTGCAGCACCGGTAGCTATACCTCAGCTACAGCAACACCAATCCATAATACAACAACACATTATATCTGGGCCATCAGAAAAACGCCATGTCATACTTAGTGGAGGCGCTGCCACTGCCGGTGGAGTTGGTATGCGTGctatagaaataaaagaaactgTTATTACCCAGGCTCAGCAACcgccacaacagcaacaacttaaCTCGCAGACTATTATAACAACACAGCAACCACCACAGGGAACAGTTGCGTCGACAACAACTCCACCACTTCTACAACAAcaggtacaacaacaaattaggGCTGTTAttgaacaacagcaacatcctTCTATTATACAGCAAAAAATATCCTCATTGCCAGTTGtgcaccagcaacaacaacagcagccacAGGCTTCTTCGTCGTTGACATCGTCAgcacagcaacaacatcagcaacaaacTAAATTGCAAAATCAAGTATTGATACAGGCTAATATTGCTGCCTCCAAACACAAAACATCACTATCACAGCAACAACTGCAAACACCAACACTTAAAGCAGCAaagCTACCGGATCCAACGCCTTCTCTGATACAATCAAAAAGTGTAACACAAACTCATAATGTTACTCATACTACTGCTCCCTCAATTCCAATAATGACTCAATCACCAGGCGTGGGAAATATTAAGAAACCGCCAACATTAATTAAACCTTCCCTACCCACAGTTAAATTGCCTCCAATTGTAAATAACCAAGGACCACCACCACTGGCTGTAGTAAATAACACAGCAACAGCTAACAACTCATCTGGAAATGCTCCTGCTCCAATGACTACAGAggtaaacaaaaaagaagaaactatCAAAACTCAGACGGCAGCACCTACTCAGGGTCCATTGTCATCAACATCTGCAGCTAAACCGAATCCTACACAAACGCCACAAACTTTAACAACTTCAGCCACATCCACAGCTTCAACGACAACATCGAGTAATAATGCTGGCTCAACACAACCACCAAGCAATCAAAATCAACCACAATTACCAACGCAATCACCACCTCAACCAACAAATGCTCCCCTTCCCGTAACAGCCCAAGCACAGCAACCACCCCAACAACTCTCCACTCTGGATGCTCAATGGTTATACATATGCGATTGGCGCAATTGTCCacgtaaaaaattcaaatcaatgGGTGATTTACAACATCATGTTTGTACATCACACGCTCCAGATCATTTAGATCCAGCGGCAGATATCTTTTGTCAATGGGGTGTAGGTCCCGGTCTCTGTGACGGGGTACCTCGTAAACGTTTTTCACTTATGACCCATCTTATCGATCATCATTTAACACTGGATAGTTTAAGAACAGCTGTTCAACGTAGAATTGCTACCGGCATGTACAACATAACACCAGCCATACCGCCCGTTACCATAGTACGTAACATTGAACTATCTCAAAGAGCTAACAATGCCTCGCCCTCACCATCGAACTCTTCATCGTCCAGTTCTCAGACCCAATCGACAACAGGACTTTCAGCTTTGCAGGCCATTAAACGTCACACAACTGATTTAATGAATTCAAAAGAGTTAATGGATGAGAATGAAGGTCCCGTTACCAAGAGTATACGTTTGACTGCCTCATTGATTTTACGTAATTTGGTGACGTATACCTCTACAGCTAAGCGTAGCATACGTCGGTATGAACCACATTTGGCAAATATTGCTTTAAGTAATGTTGAATCAAGTGTCACTATATCTCACATTCTGTATGAAATGAATGGTTGA
- Protein Sequence
- MLLNDSMKSSNISQLQQNDGSTNNASATNTIGVITASTASASASSGTTTTGTPLRSRNNNRDRQQSDDKQDSSNIKGKNPPKPMEEFYKDLQQFHEKRGTPIMHMPKITGRQVDLHRLYCEVTERGGFQKVNMRDEWDEILPELGLKEKIVNGSAALKYIYRRVLEKYECLNYFGEDPDKVDALAAAEMNEFNMGGGRGRGSRHPTSYSSSNPTIIHSVAMSYNYRQHHVNMDRRRQFKLSTDLHKPSPYEKLMLSLLSPLPNEQDFAINACTLMANEARHTLKLNEFPKLLDALLAHTGVFSDYTMRKLFQHIYSGVRHHSLYGFWYDLLSDKPQILDLYTDEQTLREAALIDDYDDGKPEMEGIWQDCTELDFLNLRTGLGTQDYVGQRVLQVVSILRNLSFQEENLGVLVKNKTFLRFLVMSSNIRWSNVHIQALEIAGNIAGELEILDPTIDDLSRCLMATICDGIEGPDRGVIINCLEILYKLCQKDTNEDYVLKCLNNSFYNTICLFLSLNDIMMLLFTLEAIYALTCLGPKSCHSMMQVKGIVDQLISLITVEGQAYGPDGCILMRVVETVPAHLLPTVAENISNLQNVAHMPQILTPNPMHVSEIPESVGENIQQAQQQQQQHQTQQQLQMPQNFTHDDEQYALAWLGATFERAPNVSSFIETQELYRMYLSHCQKSGKHSVVNHLHFPKLVRLIFTAAIGPTTVKKVDGTELPGLHYVAIRLRAQPLPLQKSSLSVSTGPISPSGKQSESPGSARKIKKKIKQQTESPVSTTTPAALPVAATTTTPQVTTNTGVAIASDNPTTATSVSEPVKQVANPVTPIISQATVQSVIEKRPLTPQQTEEKKEEKMDVEEKIDNPAKLENPTQTIVQNVPEPEPMQIVDTTSVIQPAMAQNPSSLIKSLLANKVNQRQMKQKDITASSNNTTATTTSVPTTTAQPIKMTTTAITALVNNPLMQHTPVKVGQTTIKPLNPHPPILDKKSQISESTPPPLAPLSGANVAKDASGRPIILANQMLVDILDKKMVDPPIPTSIIQKRKIEDNSGNNKRLAMDTNSSVTSAKEEPQVTPSKNAANLYAEMAASILEDEDLEEFSTQTQQQPPQPQLEQQQIQQTSLIIPAKVQQQQTTAAPLQGVQRQLVFQSNQPQLKLTQPVPTTSQQMPNAMATIKTDHGLQTVPVILQQKPMEVQQQGQTQIIQQMMQPAAQQQQTYVLATNQQGQTYLVAQQTQPHPPPPPPQPTQTVLVTQTPQQQSTGQKTIIILQQQPMPGQQQQIITTGPPGQGQKMIMTTSQGQQVLVTQRPQTPQQIFINPQTGTATHIQHMPMQTQTRQIIQTTNPPQQQQSTQIQAGQISPSLLNQLNQIPATIKLHQPIAQHTTPSPQPQPATITRMAKTVSLVQSSNTPAAPVAIPQLQQHQSIIQQHIISGPSEKRHVILSGGAATAGGVGMRAIEIKETVITQAQQPPQQQQLNSQTIITTQQPPQGTVASTTTPPLLQQQVQQQIRAVIEQQQHPSIIQQKISSLPVVHQQQQQQPQASSSLTSSAQQQHQQQTKLQNQVLIQANIAASKHKTSLSQQQLQTPTLKAAKLPDPTPSLIQSKSVTQTHNVTHTTAPSIPIMTQSPGVGNIKKPPTLIKPSLPTVKLPPIVNNQGPPPLAVVNNTATANNSSGNAPAPMTTEVNKKEETIKTQTAAPTQGPLSSTSAAKPNPTQTPQTLTTSATSTASTTTSSNNAGSTQPPSNQNQPQLPTQSPPQPTNAPLPVTAQAQQPPQQLSTLDAQWLYICDWRNCPRKKFKSMGDLQHHVCTSHAPDHLDPAADIFCQWGVGPGLCDGVPRKRFSLMTHLIDHHLTLDSLRTAVQRRIATGMYNITPAIPPVTIVRNIELSQRANNASPSPSNSSSSSSQTQSTTGLSALQAIKRHTTDLMNSKELMDENEGPVTKSIRLTASLILRNLVTYTSTAKRSIRRYEPHLANIALSNVESSVTISHILYEMNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01260774;
- 90% Identity
- iTF_00921883;
- 80% Identity
- iTF_00921227;