Lcup012871.1
Basic Information
- Insect
- Lucilia cuprina
- Gene Symbol
- Xbp1
- Assembly
- GCA_001187945.1
- Location
- JRES01000697.1:116349-118603[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-16 6.9e-13 48.1 17.3 2 65 78 155 78 155 0.98
Sequence Information
- Coding Sequence
- atgtctaCACAACCAACAGTTTTTATAACAGTGCCCAAATATGTGGCCATTACACCTATACAAGCAGCTGGAACTGCTGTTACCACCGTAGGCAGCACAGCTACCACAGTTCTGCCAAAAATTAGACCAGCTCCCCCTACTCAAACTCCGGTTGcagaacaaaaaaatgaaactacAAATGAGACTCAAGCTCCCAAGGGAAAAAAGAGACGTTTGGATCATTTAACATGGGAGGAGAAAGTACAGAGGAAaaaacttaaaaatcgcGTGGCGGCGCAAACATCGCGTGATCGCAAAAAGGCCCGCATGGAAGAAATGGAACATGAAATTGAAGATTTAacagaaaaaacacaaattttggtaaataaatGCGAATCGTTGCAAGTTATTAACGATTCGCTATtggagaaaaatcaaaaacttgaTATGGAAGTTGAAATATTAAGACAACAATTGcaagaattacaaaaacaacaacaactgcatcagcaacaacagcaacagctccagcaacaacaacaacaacacaagacTGTCACCTGTGCTGGCTGTGAGTCCTTACTCAACGGATCTGCAGTATCCAATAATACTGACCCTCTGCCGCAGGGCTCAAACCACAAGGACTCCCAGTCATCACAGGAAACACTCAGCGTATTGAAGTTGAAGCAACAGCTGAAAAAGAGTGCAACAGTATCGTCCCTATGGCATATGCTCTTACCCGACATCGAAATCGACGAAGGAGCGCTCGATGATGCAGAATTTGATGCCGGAAAGTTGGAAGAACTTGCCGAAAGCCTGCTTGCCGATATCACCGCAGACCTGGAGGCAAGCGATAGAGCGTGCAATGCGCCTGTTGCCGAAACTTCAAGCGGAACAGAGCGATTGTTTGGATCAATGGTGGGGTCCACAACAGAGTGCTTGGAATCCGGCCAACATAAAATCAGCTACAATGGCAGCTGCCTAGAAGCCATTGCAACagaaacgacaacaacaacaactccaaACACAAATCAATCCATTTCAAATCATCATAATTCCCTACAAACACCTGAACTAACattggaaaataaatttgaaaaagaaacaacTACAGCGCTGCAAACACCAACAACTTTAAACACAACTACAGCCTTAATAACAACAGTTTTACCCGACAACTCAGCAACCGCAACAGTAACCCCAGATACTGTTTATGGTACATACGATGCTAAAACAAACTCCATAACCATAGTCATGGACGATGTGGCAGTTCCGGTTAGTGAAGCTGTTGAAGAGATTTACTGTGATGGTGTAGCCGCCAGTAGCTCTACAGATGAGGTTGTATGCTCTTCAGGCATGGCTTCACCCTCACAGGTTTATCTTAATGTTGCCACCTGCTCAGATGACGATGAGGACGAGGATGATGATGTTAATTTCAATCTCGATCCCATCGAGAAATTTTTATGTCCCAAACGTCCTTTAGTCTCACCTCTAGCAAAATCTCCTGCACCTTCACTACACTCTGCCACATCAGATCATGGTTATGAATCTATAATTGGTTCCCCCTCACCACCCAGCCATCATTTTGAGCCTTTAAGTGAGGATCTCAGTGATGATGACTTCAGCACGTGGCCAGCGGGTTTTAATGAACTATTTCCcagtttaatatag
- Protein Sequence
- MSTQPTVFITVPKYVAITPIQAAGTAVTTVGSTATTVLPKIRPAPPTQTPVAEQKNETTNETQAPKGKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEHEIEDLTEKTQILVNKCESLQVINDSLLEKNQKLDMEVEILRQQLQELQKQQQLHQQQQQQLQQQQQQHKTVTCAGCESLLNGSAVSNNTDPLPQGSNHKDSQSSQETLSVLKLKQQLKKSATVSSLWHMLLPDIEIDEGALDDAEFDAGKLEELAESLLADITADLEASDRACNAPVAETSSGTERLFGSMVGSTTECLESGQHKISYNGSCLEAIATETTTTTTPNTNQSISNHHNSLQTPELTLENKFEKETTTALQTPTTLNTTTALITTVLPDNSATATVTPDTVYGTYDAKTNSITIVMDDVAVPVSEAVEEIYCDGVAASSSTDEVVCSSGMASPSQVYLNVATCSDDDEDEDDDVNFNLDPIEKFLCPKRPLVSPLAKSPAPSLHSATSDHGYESIIGSPSPPSHHFEPLSEDLSDDDFSTWPAGFNELFPSLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921198;
- 90% Identity
- iTF_00921198;
- 80% Identity
- iTF_00921198;