Llun004900.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lordithon lunulatus
Gene Symbol
nfxl1
Assembly
GCA_963942505.1
Location
OZ012666.1:65409528-65416538[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 3 5e+04 -5.1 1.9 15 19 188 192 188 192 0.85
2 18 0.16 2.7e+03 -0.1 0.4 4 10 223 229 222 231 0.94
3 18 2.5e-07 0.0042 18.5 16.4 1 19 237 254 237 254 0.99
4 18 5.3e-09 8.9e-05 23.9 13.3 1 19 289 307 289 307 0.99
5 18 2.1 3.5e+04 -3.6 1.0 6 10 332 336 331 336 0.88
6 18 4.5e-07 0.0075 17.7 8.3 1 18 342 359 342 360 0.97
7 18 3.9e-09 6.6e-05 24.3 8.8 1 18 395 412 395 413 0.97
8 18 0.24 4.1e+03 -0.6 0.7 1 5 422 426 422 431 0.89
9 18 0.00088 15 7.2 19.7 1 18 447 464 447 465 0.92
10 18 6.9e-08 0.0012 20.3 13.3 3 18 476 491 468 492 0.85
11 18 1.5 2.5e+04 -3.2 0.6 5 10 520 525 520 525 0.92
12 18 0.0089 1.5e+02 4.0 5.4 10 19 541 550 538 550 0.90
13 18 0.041 6.9e+02 1.9 5.8 1 12 560 570 560 570 0.89
14 18 3 5e+04 -6.9 4.5 14 18 598 602 598 602 0.86
15 18 3 5e+04 -4.5 3.8 12 18 626 633 626 634 0.80
16 18 0.00032 5.3 8.6 7.0 1 11 639 649 639 650 0.96
17 18 1.2e-05 0.21 13.1 18.8 3 19 679 695 678 695 0.92
18 18 2.8e-05 0.48 11.9 12.9 1 17 738 756 738 758 0.86

Sequence Information

Coding Sequence
atgttagcatatgcggaaGATGTAGTGCTGGTGGCCAAAAGTGTGGAAGTGATGTTGGAAGGCATGGGAAGTTACCTGGATAAGAGCAGAAATTCTGGGCAACAAAAGCCTAAAAATCCATGGAACAAGCCTCAAAACCAAAAACCAGCTAAACAGAATGGCCCAAAGAAATCTGAAGATAAGTTCAAAGAAGCTCAAATCAAACTGCAAGAAGCTGTTCAGAAATATGCCAAAGAATATGAATCGTCTGAGGAGGAGGAAGAATTGGAAGCAGACAATGTTATAGATACActtctaaaaaattacaatgcaACTGGAGCTCAAACAGAACTAATAGGCAGAACAAAAGGTTTCCTGGAGGGTGCATTCCTTTCAGGTGCATCAACATGCCTCATATGCATCTCCTCTGTTAAAAGAAATGAATCAatatgGTCCTGTTATGAATGCTACTGTCTGTTTCACCTAATGTGCATTCAACGATGGTCAAAAGACAcaatatttcaacaaaaacaagaattaCAAGAACAAATCCAGTTTAGACCAATTAAAATGAAATGGGGTTGCCCCAAGTGTAGAACTGAATATATCCCTGAAGACATTCCAGCTGATTACTTATGTTTTTGTAAGAAAGTTAAAAACCCAACATTCCAACCACTGATAGTGCCTCACTCATGTGGTGAAACTTGTGGTAAACAATTGAAACCACAGTGTGGGCatgattgtttattattatgccaCCCTGGGCCATGTCCACCATGCCCTAAAACAGTTAAATCTACATGTTTTTGTGGGTGTAAAAGTACTGTCCAAAGATGTAGTAATAAGGAATGGTCATGTGGATCCCAGTGTAGTAAATTGTTGACATGTGGTAAACACAAATGTGTGGATTTGTGTCATAATGGGGACTGCAAGCCATGCCCAAAGAAAAGCATGCAGAAATGTGTGTGTCAAGCTGAAATTCAACTTAGGGACTGCACTACACCTGTGTGGCAATGCGATAAAGTTTGtaacaagaaattgtcttgttcaAACCACTGGTGTGATGAAAAATGTCATATTGGGGATTGTGGTGAATGTTTGCTGTCACAATCTAGAACGTGTCCATGTGGGAAAAGTTGTTACCAGTTGCCTTGCACTGAGGATACTCCAACATGTGGGGATACATGTAATAAGTTGTTGGAGTGTGGGATGCATTATTGTAACCAACGATGTCACAAGGGAAGCTGCATGacgTGTTTGGAAATTGTTACTAAGACATGTCGATGTGGTAACCACTCAAAGGAGGTTCAGTGCAAGAAGTTGTATCTTTGTGAGAGTAAATGTAAGCAGATGAAGGATTGTCATAAACATCCATGTAATAGGAAGtgttgCGATGGAAACTGTCCGCCTTGTGAGAAGCCGTGTGGTCGAACATTAAGCTGCAAAAAGCATACTTGTAGTTCTGTCTGTCATAGAGGACCATGCTATCCTTGTAATTTAACAGAGTCTGTTTATTGTCGCTGCAGTTTCACTTCATTGACGGTACCTTGTGGCAAGAAAAGTAAAACCAGACCTCCAAAATGCATGAAATTATGCATTTTACCCAGTGAATGTCATCATAAAACTAGAGAACCGCATCGTTGTCATTTTGGCGAGTGTCCGATGTGCAAGCAAGTATGCAACAAAGACAGAAAAATGTGTTCTCATAGTTGTCCTGCTTCTTGTCATACTTCGGTTTTGGTGAAAATAGAAGGGCAAAAGGCGTCGACTCCTTGGGAAGACAGAGGCCCGCAAATTACTAAAAAGGCAATTCCATGTCCTGACTGTGTTGTTCCAGTTCCAGTTACTTGCTCAGGTGACCATGAGACTGCAAATTGGCCGTGTTATATAGCCAAACCAGGAAGTTGTGGAAGACCATGTGGGAGAAGTTTATTATGTGGTAATCATCTATGTCAGAAACAATGTCATGCTGTGGAAGAATCTGATACATCTCTAGCAAGCAAAAACTGTGTCCAATGTGAACAAGGCTGCTTGAAAGAAAGGCCTACAGATTGCACCCATGCATGTCCTAAACCATGTCATCCAGGACAATGTCCACCATGCAAACAGTTGATCAGAATGAAATGTCATTGTGGACTATCACAAAAATATATTCGGTGCAGTGAATGGACTGCTAATGAGAACAGGGAGTCACTGCAGAGCTGTGAAAATCAATGTCCTAAAAATTTTGCCTGTGGACACCGTTGTCGCGCGAATTGCCATTCTGGCGAGTGCCCGAATCCAGAGCAGTGCAAGAAAAAAATGAAGGCCTTCTGTCCGTGCAAGAGGATCAAAAAGGAGTTCTCATGTGAATCATTCCGAAATGGGCTGGCTGTAGTTGCTTGTGATGATGTTTGTGCACAGAAAAAGTTAGAGGAGAAGGAAATTAGGGCGTTGGCGAATGAGGAGAAACGGTTGCAAGAGGAAAGAAAAAATAAGATTGAGTTGGAGAAGTATGAGAAGATGTTTCAGGGCAAAAAGAAGACGAGGGACCGCAGAGCGGTTGAAGAAGTCGTTGAAAAAAGTTTTATGgagaaatattggattgtagTTTGTGGTGTTCTTGTGTGTTGTATTGGTTTTTATTTTGCAATGTTTGGTGTTAGAAGTTGA
Protein Sequence
MLAYAEDVVLVAKSVEVMLEGMGSYLDKSRNSGQQKPKNPWNKPQNQKPAKQNGPKKSEDKFKEAQIKLQEAVQKYAKEYESSEEEEELEADNVIDTLLKNYNATGAQTELIGRTKGFLEGAFLSGASTCLICISSVKRNESIWSCYECYCLFHLMCIQRWSKDTIFQQKQELQEQIQFRPIKMKWGCPKCRTEYIPEDIPADYLCFCKKVKNPTFQPLIVPHSCGETCGKQLKPQCGHDCLLLCHPGPCPPCPKTVKSTCFCGCKSTVQRCSNKEWSCGSQCSKLLTCGKHKCVDLCHNGDCKPCPKKSMQKCVCQAEIQLRDCTTPVWQCDKVCNKKLSCSNHWCDEKCHIGDCGECLLSQSRTCPCGKSCYQLPCTEDTPTCGDTCNKLLECGMHYCNQRCHKGSCMTCLEIVTKTCRCGNHSKEVQCKKLYLCESKCKQMKDCHKHPCNRKCCDGNCPPCEKPCGRTLSCKKHTCSSVCHRGPCYPCNLTESVYCRCSFTSLTVPCGKKSKTRPPKCMKLCILPSECHHKTREPHRCHFGECPMCKQVCNKDRKMCSHSCPASCHTSVLVKIEGQKASTPWEDRGPQITKKAIPCPDCVVPVPVTCSGDHETANWPCYIAKPGSCGRPCGRSLLCGNHLCQKQCHAVEESDTSLASKNCVQCEQGCLKERPTDCTHACPKPCHPGQCPPCKQLIRMKCHCGLSQKYIRCSEWTANENRESLQSCENQCPKNFACGHRCRANCHSGECPNPEQCKKKMKAFCPCKRIKKEFSCESFRNGLAVVACDDVCAQKKLEEKEIRALANEEKRLQEERKNKIELEKYEKMFQGKKKTRDRRAVEEVVEKSFMEKYWIVVCGVLVCCIGFYFAMFGVRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-