Basic Information

Insect: Lordithon lunulatus
Gene Symbol: RREB1
Assembly: GCA_963942505.1
Location: OZ012668.1:42176449-42181984[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00059 0.093 14.6 1.0 1 23 77 99 77 99 0.96

2 16 0.0008 0.13 14.2 0.2 1 23 112 134 112 134 0.98

3 16 2.1e-05 0.0033 19.2 6.2 1 23 140 162 140 162 0.99

4 16 1.5 2.3e+02 4.0 0.1 1 19 222 241 222 246 0.66

5 16 1.9 3e+02 3.6 2.8 2 23 252 274 252 274 0.78

6 16 8.6 1.4e+03 1.5 1.5 1 19 322 340 322 343 0.86

7 16 0.035 5.5 9.1 0.2 1 23 475 497 475 497 0.98

8 16 4e-06 0.00064 21.5 0.3 1 23 506 528 506 528 0.99

9 16 0.00042 0.067 15.1 2.0 1 23 534 557 534 557 0.97

10 16 0.00075 0.12 14.3 2.8 1 23 903 926 903 926 0.96

11 16 0.00052 0.083 14.8 0.4 2 23 1148 1169 1147 1169 0.97

12 16 0.13 21 7.2 6.3 1 23 1175 1198 1175 1198 0.97

13 16 2.1 3.3e+02 3.5 3.4 1 20 1225 1245 1225 1249 0.93

14 16 1.1 1.7e+02 4.4 5.6 1 23 1298 1321 1298 1321 0.93

15 16 0.018 2.8 10.0 0.4 3 23 1368 1388 1366 1388 0.93

16 16 0.0079 1.3 11.1 5.9 1 23 1394 1416 1394 1416 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00059	0.093	14.6	1.0	1	23	77	99	77	99	0.96
2	16	0.0008	0.13	14.2	0.2	1	23	112	134	112	134	0.98
3	16	2.1e-05	0.0033	19.2	6.2	1	23	140	162	140	162	0.99
4	16	1.5	2.3e+02	4.0	0.1	1	19	222	241	222	246	0.66
5	16	1.9	3e+02	3.6	2.8	2	23	252	274	252	274	0.78
6	16	8.6	1.4e+03	1.5	1.5	1	19	322	340	322	343	0.86
7	16	0.035	5.5	9.1	0.2	1	23	475	497	475	497	0.98
8	16	4e-06	0.00064	21.5	0.3	1	23	506	528	506	528	0.99
9	16	0.00042	0.067	15.1	2.0	1	23	534	557	534	557	0.97
10	16	0.00075	0.12	14.3	2.8	1	23	903	926	903	926	0.96
11	16	0.00052	0.083	14.8	0.4	2	23	1148	1169	1147	1169	0.97
12	16	0.13	21	7.2	6.3	1	23	1175	1198	1175	1198	0.97
13	16	2.1	3.3e+02	3.5	3.4	1	20	1225	1245	1225	1249	0.93
14	16	1.1	1.7e+02	4.4	5.6	1	23	1298	1321	1298	1321	0.93
15	16	0.018	2.8	10.0	0.4	3	23	1368	1388	1366	1388	0.93
16	16	0.0079	1.3	11.1	5.9	1	23	1394	1416	1394	1416	0.98

Sequence Information

Coding Sequence: ATGCAAGGTGTACTTTGCATGCCGCCCCAACAGCAATTCGGCGGCTCCGACAAAATTAATGACACAGCGATGGACGTCACGACTGAACCAATTACCAAAGAAATGAACCAAAGCGACTCAGGAATATACTCGGGCAATTCGACGTACCCGGAGGACTCGACGAACCGAACGCATCAGTCCGAAAACGAGACAGATAACCGATCGGAATGCAGCACGCCAGACCGGAAGTACCTATGTCCAATCTGCGAGACGATGCTAACGTCTCAGCACGACTTCACCCTGCACATCCGGTCACACAACAACGACACGGAGCTACAAGATCCCGACAAGGGATACACCTGCAGGATCTGTTTAAAGGTCCTTAGTTCAAGTTCCAGTTTGGATAGGCACGTGCTGGTGCACAGTGGCGAAAGGCCGTTCACGTGTAAACACTGCGGTGACACATTTACCACCAATGGGAATATGCACAGACATATGCGAACACATAAAGCGGAAAATAGTTACGAATCCGATGGAAGCACTGACAGTAACGTCAGTTCTGGATCGAAAGGAAtcgaatttaataacaataaaatcgaTAAATACGACAACAAACGGAAATTGGAGGATGAATCATATAAGTTACCACGAAAAAAGCCACATTATGATAGTCATCTCGAGAACTTCAAATGTCCTATTTGTGATAGGGATGATTTTATTAGTGTAAAATCACTTGAAATGCATTTGGAGGATAATCATCCCGATTATCCTGCAAAATGCCACCAATgcaatcaaatttttaaaaataataaaattcttaattttcatCGCACTACCGTTCATCCtgatgaaaatggaaaatctaaAGCATCATTAGTGGGCTTTAAGGATCTTACATTCGTTGATTTTAGTAGCGAGAAATTTCCACATATCGCTCGTTTCGAGTGCGAGAGGAATTTACACAAGGCCGCCGCGGGGCAGAAATATCAGTGCGGTAAATGTGTACGCGCGTTTCCCTGCGAGAAATCTTTAGAAATCCACTGCAGGGATTGCGGCACGCTCGATTTAAGCATAAGCAGCGAAAGTTCGCTCGACTTCACCAAATCACGTCTATCGGAGAACGATATACGCCGCAGCGACTTTTTCAAACGTCTCGACCTGCAGGATAATTCCCCGGAGAAATCGAAGCCGCCCACAACGTTCCCCGACACGCCCAGGAAGCTGCAGCAGCGCTTGTTGGAAACGATGAAATCGATTGATAGCAGCAAAGACCTCGCCGATATCCAATCTATAATTTCAATGTCCACAAACGGGAGCTTCTTGCAACACCTTCAACAAAAGAGTGTCGAGGTTGCGCAGGCAAACGAAACAGAGAAAACGGAGGAGGAAGAGTCACAGGATATATTCGCGCAGGAGTTCCGCAAAATGAAACTCCGCGGTGAGTTCCCATGCAGACTTTGCACCGCGATCTTCCCCAATCTGCGAGCCCTAAAAGGACACAACCGCACCCATCTTAATAGCACCAATAACGGCACGTATAGATGCAACATGTGTCCTTACACATCAATCGATAAAGCTGCCCTTATACGGCATATGCGCACTCACAACGGTGACCGCCCTTATGAATGCGCAATCTGTAACTACGCTTTTACTACCAAAGCAAACTGCGAACGCCATCTCCGCAATAGACACGCTAAAACCACCCGTGATGAAGTTAAACAAGCCATCATATATCATCCTTCAGAAGACCCTACTAACGAAGATATTTCAAAACAACTCGATGCCAAAAAATTGAACAGCAGCACAAACTCAATTGATTCAAACGATTTAGTTCCTGAAAAGATCAGAAGCTCCACTCCTAAAAACTCGTTCCCAGATATACTTCCAAGCACCAATCTAATCCCAATTCCtaataaattgattaaagaAATCACTCCAAAGACGTTCCAAAATGAAACCATTAAAACCCATATCTCACCCTACATTCCACCTCAAATAAGTTTCGCCCCGAAATTCAATAATACTTCCACACCGCACAAACCGACCAACCCAAAAATACACGTTAAAAATCTCGAAGCACTGAAAGAGATTCCCGAATACGAGTACTCCGACGAGGAATGCAACGAGGAACCAATGGACCTGGTTCTTGATCTTAGCAAGAAGAAACCTGAGGAGAAAAAGGTAGTGAAAGTCGAAGAGCTTCCTGAAGATTTAACGAAGAAAAACAGCGAACACCCAATGAGCATGAGTGATATCCTCGCACAACAACTCCTCAAAAACACCCCGAAAATCGACCACGCCGCTCTCTATCAAATAGCCTTATATCGCAACGGCTTCCCCAACTGGCCCGCATTCCCCATCAACCCCCTCCTCTACCCATCAATCCAACCACCAATGTTCCAAGACCCACAAGACATGAAAGAGCGCCTACAACGATTACAACTATGCGGCGGCGGCATGATTATGGACAACATCGCTGAACGCCTCAAAAACATCTACCCACCGGCAGCAGCTGTGAACTACCCACAGTTCCCCAAAACAGAAACACCCGATGAAATGAAACCATTAACACTCAACACCGAACCCAGCTTCAATGATAGCATAAAACTACAGAGTCCTTCAATAGGATCAGACCTGCTCCAATCCCCAAACTCTGTTAAAATGGTTATCAAAAACGGTGTCCTAAtgccaaaacaaaaacaacgcCGCTACCGCACAGAGCGGCCCTTTTCATGCGAACACTGCTCCGCGCGTTTTACATTGAGATCCAACATGGAACGCCATATTAAACAGCAACATCCACAGTACTGGTCCCAACGACAACGAGCTTCTGTTGGTAATCCCGGTAGGAAACCCCAATTGTTACCATCAACTATTAAAAATTGTGAACTTACTATACCCTCATATGAAGTACCAAAGATGCATGACTATGATGATACCAAAGAAGGAAATACCATTTCCGATAAACTTAAGTACGCAATACTCTCGCAACACTTGCGGGCGGCCCAAGAAAAGAGTTTTGAGCGACGTGAGGAGGATGAGGATTGTGCGCTCGTAATTGATGAGAATGAGCATAAAAATGAGATGtgttatgaaaataatagtCCGAGCAAATCGCGCATATTGGAAGAGAAGTTGAAGGAACTGCGTGAGAAACAGATGATGATTGAAAGGGGGCGGAATGAGGTGAAGGTTGTAAAGAGTGAGGAGGCGCAGGATTTGGTGCCGGTTTCGCGGTTGCTTGATAACGCGTCGCAACAGCCGTTTAAGGACTATTTCCGGAGGGATGGCGAGGAACATGATGTTGAGGGGATTAGCGAGGAAGATGAAGAGGGGTTAGTGGCGAGTGGAAGTACTAGTGAAGGCAACTCCGGAACGGATGAGAATAGatcGGAGGGTGACAACGCACCAAATCAACCAACCAAGAAAAAATCAGCCTACTCTTTAGCTCCAAATCGCGTGAGTTGCCCCTATTGCAGTCGCAAGTTCCCTTGGACCTCATCTCTGCGAAGACACATCCTAACCCATACCGGCCAAAAGCCGTTCAAGTGCAGCCACTGTCCACTTCTCTTCACAACTAAATCCAACTGCGACCGCCACCTGCTCCGCAAACACGGCAACGCCGCAACAACCATctcaaatgaaaatgtgaacaaCAACAATTTTATGATGCGCAACGTGCCCGAGCGACCATTCAAATGCTCCAGCTGCCCCAGCAGCACATTCTCCGCCTACTCCAACTTGAAAAAGCACATGATTTGCAAGCACGGAGCACAGGACGATCGTCAAGGCTACGAAGCCGGCAGTTCGGAGGATGAGAAAAACAGCAGCGATCAGAAGAGCGACTGGGAAACGCAAATATCCCACGCGAAACCTCCATCTGGGGATCAAGTCCAAAACTCAGACTTACCCTTCAAATGCCACCTATGCGACCACTCATTCGCCGAACGCCAAGACTGTTTGGATCACATCAGAGACAAACACGCATCCGAATACGACCTCCTAATGACTAAAAACGCTTTAGACCTCAACGCCTCCACCCCTGACGACAGTGGCAACCACGAGGATGAAGACAGTGAGATCCGAGGCAAGTTTCCCGATTATTCAAACAGGAAAGTAATTTGCGCGTTCTGTATGAGACGTTTTTGGTCTGCTGAGGATCTACGTAGACATATGCGAACGCACACAGGTGAGCGACCCTTCAGTTGCGACATTTGCAGGCGCCGTTTTACCCTAAAACATAGCATGTTGCGTCACCGTAAGAAGCACAACGTGGCTTTTGATAATGACAACGCTCAAAGTGACGACGAAGAGAAATTCCCTGCAATTGAAAACAATAATCGATCCTTAAAACCCATGGAGAAAACGGATGAGTCTGATGGCAATGAAGGCAGCGATTTGATAAGCAATCTTTTGGGCATACGAGATCGTTCTATCATAGAGCAAGTATTAACAGCATCTGCTGATGATGCTGCCAAACTATTGGGCGTCGGCGGACAggagtaa
Protein Sequence: MQGVLCMPPQQQFGGSDKINDTAMDVTTEPITKEMNQSDSGIYSGNSTYPEDSTNRTHQSENETDNRSECSTPDRKYLCPICETMLTSQHDFTLHIRSHNNDTELQDPDKGYTCRICLKVLSSSSSLDRHVLVHSGERPFTCKHCGDTFTTNGNMHRHMRTHKAENSYESDGSTDSNVSSGSKGIEFNNNKIDKYDNKRKLEDESYKLPRKKPHYDSHLENFKCPICDRDDFISVKSLEMHLEDNHPDYPAKCHQCNQIFKNNKILNFHRTTVHPDENGKSKASLVGFKDLTFVDFSSEKFPHIARFECERNLHKAAAGQKYQCGKCVRAFPCEKSLEIHCRDCGTLDLSISSESSLDFTKSRLSENDIRRSDFFKRLDLQDNSPEKSKPPTTFPDTPRKLQQRLLETMKSIDSSKDLADIQSIISMSTNGSFLQHLQQKSVEVAQANETEKTEEEESQDIFAQEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRTHLNSTNNGTYRCNMCPYTSIDKAALIRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKQAIIYHPSEDPTNEDISKQLDAKKLNSSTNSIDSNDLVPEKIRSSTPKNSFPDILPSTNLIPIPNKLIKEITPKTFQNETIKTHISPYIPPQISFAPKFNNTSTPHKPTNPKIHVKNLEALKEIPEYEYSDEECNEEPMDLVLDLSKKKPEEKKVVKVEELPEDLTKKNSEHPMSMSDILAQQLLKNTPKIDHAALYQIALYRNGFPNWPAFPINPLLYPSIQPPMFQDPQDMKERLQRLQLCGGGMIMDNIAERLKNIYPPAAAVNYPQFPKTETPDEMKPLTLNTEPSFNDSIKLQSPSIGSDLLQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRASVGNPGRKPQLLPSTIKNCELTIPSYEVPKMHDYDDTKEGNTISDKLKYAILSQHLRAAQEKSFERREEDEDCALVIDENEHKNEMCYENNSPSKSRILEEKLKELREKQMMIERGRNEVKVVKSEEAQDLVPVSRLLDNASQQPFKDYFRRDGEEHDVEGISEEDEEGLVASGSTSEGNSGTDENRSEGDNAPNQPTKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTISNENVNNNNFMMRNVPERPFKCSSCPSSTFSAYSNLKKHMICKHGAQDDRQGYEAGSSEDEKNSSDQKSDWETQISHAKPPSGDQVQNSDLPFKCHLCDHSFAERQDCLDHIRDKHASEYDLLMTKNALDLNASTPDDSGNHEDEDSEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVAFDNDNAQSDDEEKFPAIENNNRSLKPMEKTDESDGNEGSDLISNLLGIRDRSIIEQVLTASADDAAKLLGVGGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -