Basic Information

Insect: Lordithon lunulatus
Gene Symbol: -
Assembly: GCA_963942505.1
Location: OZ012666.1:66455969-66461536[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00052 0.083 14.8 4.1 1 23 198 220 198 220 0.97

2 11 1.6e-05 0.0026 19.6 1.5 1 23 226 248 226 248 0.98

3 11 3.5e-05 0.0055 18.5 1.0 3 23 256 277 254 277 0.94

4 11 0.016 2.5 10.1 5.2 1 21 283 303 283 305 0.95

5 11 0.00016 0.026 16.4 1.9 1 23 311 333 311 333 0.99

6 11 9.5e-06 0.0015 20.3 0.6 1 23 339 361 339 361 0.98

7 11 0.00041 0.065 15.1 1.4 1 23 369 392 369 392 0.97

8 11 0.00023 0.036 15.9 2.6 2 23 399 420 398 420 0.97

9 11 0.00021 0.034 16.0 0.3 1 23 426 448 426 448 0.98

10 11 2.6e-06 0.00041 22.0 2.2 1 23 454 477 454 477 0.97

11 11 2.7e-08 4.3e-06 28.3 0.8 1 23 491 513 491 513 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00052	0.083	14.8	4.1	1	23	198	220	198	220	0.97
2	11	1.6e-05	0.0026	19.6	1.5	1	23	226	248	226	248	0.98
3	11	3.5e-05	0.0055	18.5	1.0	3	23	256	277	254	277	0.94
4	11	0.016	2.5	10.1	5.2	1	21	283	303	283	305	0.95
5	11	0.00016	0.026	16.4	1.9	1	23	311	333	311	333	0.99
6	11	9.5e-06	0.0015	20.3	0.6	1	23	339	361	339	361	0.98
7	11	0.00041	0.065	15.1	1.4	1	23	369	392	369	392	0.97
8	11	0.00023	0.036	15.9	2.6	2	23	399	420	398	420	0.97
9	11	0.00021	0.034	16.0	0.3	1	23	426	448	426	448	0.98
10	11	2.6e-06	0.00041	22.0	2.2	1	23	454	477	454	477	0.97
11	11	2.7e-08	4.3e-06	28.3	0.8	1	23	491	513	491	513	0.97

Sequence Information

Coding Sequence: ATGACTGCTCAATTCACCACCTCGCAGATCAAGCTCGAGGGAGTTGATTCTGCTGAAAATGTTACTGAGATACAATCATATCTGGAAGGGTTCCAGAAAGAAATTGAGGGGACAGATGGAAGTATACAGCCAGTTGCAGAAATTGAAGAAGCTGATAATGAGGCGGAAGAAGGCACCTATTTTGTTGACCAGGCTGGGCACTACTACTATCAAGCCAAGGGTGAAACACAGCCAGTGATGACAGTTGTTCCTGGCATGAATGAGGAGAATGCAGAAGAGTTTATAATCAATCAAGAAACTGAGGAGGATATCAATGAAGAAGAAGGCGAGAAAtcctcaaataaaaatttatttcagagAATCACTGTAGTGCCCTCAGGCACTGAAGGGGGTTCAAATGAACTGAGCTATGTTCTTATTGTACAACAACCTGATGATAAAGAAGGCGAGCAAACAGATGGTGAACAAGATATGGCTGTGTATGATTTTGACGAGGGCGAAGATCCCGGTATGATAGACTCCGATGTGGAAGATGATAAATCTAAAATCGTAAAGATTTTCCCACGCAAATCTCAAGTGGTCACCCAAGCACATATGTGCAACTACTGCAACTACACCAGCCCGAAAAGATATTTGCTGTCACGTCACATGAAGTCACATTCAGAGGAGCGGCCACACAAATGTTCGGTTTGCGAGCGAGGCTTCAAAACACTTGCTTCTCTACAAAATCACGTTAACACACACACCGGCACCAAACCACATTTATGCAAATACTGCGATGCCGCTTTTACGACATCAGgtGAATTAGTAAGGCACGTTCGATATAGGCACACTCACGAAAAACCCCACAAATGCCATGAATGCGACTACGCTAGCGTAGAATTATCAAAACTAAAGAGACACATAAGGTGCCACACGGGCGAAAGGCCCTACCAATGCCCCCACTGTACCTACGCCAGTCCAGATACGTTCAAATTAAAAAGACATCTTCGGATTCACACCGGCGAAAAGCCTTACGAGTGTGATATTTGTCAAGCCAGATTTACACAGTCCAACAGTTTGAAGGCTCACAAACTCACTCACAATGtggGTGATAAACCTATATTCCAATGCGAACTATGTCCGACAACATGTGGTCGGAAAACAGATTTACGGATACATGTTCAAAAGCTGCACACTTCAGATAAACCACTGAAATGTAAACGATGTGGAAAACAATTTCCGGATAGATATAGTTACAAGTTACATAATAAAACACATGAGGGTGAGAAATGTTTCAAATGCGAACTCTGCCCGTACGCCTCGATATCGGCCCGCCATTTAGAGTCCCACATGTTGATACATACGGACCAGAAGCCTTATCAGTGCGGCCAGTGCGACCAATCGTTCAGACAGAAGCAGTTGCTGAAACGCCATCAAAACCTTTACCACAATCCCGCGTACGTCCCGCCACCACCCAAAGAAAAGACGCACGAGTGCCCCGAATGCGGTAGGGCGTTTAGACACAAGGGTAATTTGATCAGACATATGGCCATTCATGATCCAGACTCGCTGCTGCAGGAGAAACAACTGGCGCTGAAACTGGGCAGGCAGAAGAAGATTCAGATGATTGATGGGCAACAGGTTGAGGTTTCATTGGGTATGGACAGTGATGAGGAGGAGGAGGATGAAGAAgatgaggaggaggaggaggaggatgaTGAGCCTGATATGATTGCTGTTGATGGGTCTGATGGACAACAATATGTTGTACTGGAAGTAATACAGTTAGCTGATGGTGAAGAGCAAGCCATGGTTGTTGGAGAGGGACAGACAGAGATTATGAATGAGAATATGCTACAAGATCATGaTATGAACGATGAAGATGTGTTGAAGGCATTGCAATCTGCAAGGAGAATTGCTAAAGAAGAGGAGGAGGATGAAAAGAAAATTACCACTACTCATGATATGGAGACATGCTTCGGATTTGATGAGGATGATGAGGATGAAGAGGAGCTGCATGGCAAGGACTCCATCACTCTATTAGGAATGGACTGA
Protein Sequence: MTAQFTTSQIKLEGVDSAENVTEIQSYLEGFQKEIEGTDGSIQPVAEIEEADNEAEEGTYFVDQAGHYYYQAKGETQPVMTVVPGMNEENAEEFIINQETEEDINEEEGEKSSNKNLFQRITVVPSGTEGGSNELSYVLIVQQPDDKEGEQTDGEQDMAVYDFDEGEDPGMIDSDVEDDKSKIVKIFPRKSQVVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHLCKYCDAAFTTSGELVRHVRYRHTHEKPHKCHECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICQARFTQSNSLKAHKLTHNVGDKPIFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKQFPDRYSYKLHNKTHEGEKCFKCELCPYASISARHLESHMLIHTDQKPYQCGQCDQSFRQKQLLKRHQNLYHNPAYVPPPPKEKTHECPECGRAFRHKGNLIRHMAIHDPDSLLQEKQLALKLGRQKKIQMIDGQQVEVSLGMDSDEEEEDEEDEEEEEEDDEPDMIAVDGSDGQQYVVLEVIQLADGEEQAMVVGEGQTEIMNENMLQDHDMNDEDVLKALQSARRIAKEEEEDEKKITTTHDMETCFGFDEDDEDEEELHGKDSITLLGMD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00902440;
90% Identity: -
80% Identity: -