Llun039339.1
Basic Information
- Insect
- Lordithon lunulatus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963942505.1
- Location
- OZ012674.1:1342359-1350696[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-15 2.6e-11 44.9 0.1 3 44 591 632 589 634 0.95 2 2 3.5 1e+04 -1.9 1.0 6 17 739 750 738 752 0.88
Sequence Information
- Coding Sequence
- ATGATGCCTTTCGGCCCCAAAAAGGACGGCAGCCCCAATGCCAAGTATTTTGAGTCCGCGGAGACTCTTGCGGCCCTCGAAATTGTCAAAATATGGCTGCAGAAAAATAGCAAAAAGTATATTATGAATGATCCCCTAACAAACAAAACTATCTCAACTTTGGTGATACAACTGATGCAGTTCCAAGAAGACAATCTCGGCAAAAATGTGCAAAAACCCTGCATTACAAGAATCCCTATAAAATTCTTCATGGATTTTAAACCAGGTGGTGCACTTTGCTTCATGCTCACCACTGCCTTCAAGTTCAAACTTGAACAGGGTTTGCGGAAATTCGATTTTCAAATAAGCAAGAATCCTGGTCGTACGGATAAGTGGCTGGAGATGTTTCAAGCAATGGAGAAGTCGCTTATACAGAACAAGTTCTACGTGCCGCCGACGATCTATGTGAAGCCCGAGGTGGAGAAGAATTTGGCGATGAAGTTGAAAGACATTGTGAAGAAACGGAACGGGCATGTTGTTGAGAGCGAGATGGTCGCCACCCATGTGCTTTATCCCCACTGTGATCCTCTAGAAGAGGAGTACGCGCGGCCTGGTATGAAACAAGACAAAATGATCTTGATACACTGGTATTACTTTCCGGAGTCGTATGATACCTGGGTAAATGTTGAGGGGGCACTTGAAGGAATCACTCCGGATCTTAATCCCATGCATCTCTCCCCCTGGCGCGTTTCTTCAACCTGGCTGTTAGATTCTGACCAGTATAATGAGTGGATGTCTGAAGAAGACTACGAGGTTGATGAGAGCGGTCGGAAAAAGGTGCACAAGATGCGTATGTCAGTTGAGGATCTAATGAATCCTAGCTCGGATGCCGATAGAAAGAAGAAGAATAAACGTAAGCGTTCGCCGTCGCCACAGCAAAAGGCGGGCAAGCGAAAGAGCGGTCGCAGTCCTGCGGTAGGCAAGAAACCGCGGCCAGAAGATGCTGAATCGGAAGACCTAACCAAAGACATGGAAGATCCCATACCTGAACCCAGTGTGACAGAAGTCTGTCCCACAACGTCCGGCCAGCCGGGCAAAAAGGACCACGAGCTTCTACCGCTCAAAGGCGGCTCGGTTACCGATATGGACGAAACGGAAGAGCGCTGCGAGGATTCGCAAACGGGAAAAACATCCGACGTTACCCCACAAGAAGAAGGACAAGAGGATAACGTCACCGAGCAAACCCATCACATCATCGTACCGTCCTACTCCTCCTGGTTCGACTACAACAGTATTCACGAAGTAGAAAAACGCGCGCTCGCCGAATTCTTCAACAGCAAAAACAAATCCAAAACGCCCGAAATATACCTGGCCTACAGAAACTTCATGGTAGATACCTACCGCTTGAACCCCACCGAATATATAACAAGCACCGCATGCAGACGAAACCTAGCTGGTGATGTGTGCGCTATTATGCGAGTCCACGCCTTTTTAGAGCAGTGGGGACTGATTAATTACCAAGTTGACACCGACTCCAGGCCCACACCAATCGGCCCGCCACCAACATCCCACTTCCATATCCTATCCGACACCCCCTCCGGTTTACAACCGGTGAATCCTCCTAAAACACCACAACCTTCAGCCGCCAAAACCCTTTTAGATCTCGACAGATCACAAGAAGTAAAGAAATCGGAAACAAACGATTCGATAACCAGTTTTGGCCTTAAACTCGATCAGTATTCTAAGAAACCTGGTGCGCTGAAGAACAAAAACGCTGCTTCATTAGCAAGGGATTGGACTGAACAAGAAACACTCCTGTTACTTGAAGGTTTGGAGATGTACAAAGACGACTGGAACAAGGTGTGCGAGCACGTGGGATCGCGCACACAGGACGAGTGTATACTACATTTCCTCCGACTGCCAATCGAAGACCCGTATTTGGAAGACCCCGAGGCGGGCGGCGCGCTAGGTCCATTAGCATACCAACCCATTCCATTTAGCAAAGCTGGTAACCCTATAATGTCCACGGTGGCCTTCTTAGCATCCATTGTTGACCCGCGCGTGGCTGCAGCGGCCGCGAAGTCCGCGATGAACGAGTTCGCCAGCATCAAAGACGAAGTGCCTGCGGCTTTAATGGATGCGCACTTGAAAAACGTTGAGGCCTCTTCCACCGACGGCAAGTATGATCCTGCTGCCGGATTGGCTTTGAGCGGGATCGCTGGAACAGTACCGGAAAAGGAGGAggatgataaaattaaaaaggaaGTGGAAGTGAAAGAAGAGGAGAAAATTGAAGGTGTCGAGCAGAAGAAAAACGGAATCGAGCCACCGGAAGAGAAGATTGACGATAAACTGATGAAGACGGAATCTCAGGATAGCGACAAAGAAGAGAAAATGGACACGTCGGACCCAAAACCCGAGAAGGTGGTTCGCGACAGTGAAATGCAAAGCGCCGCGGCTGCTGCGCTGGCGGCGGCGGCTGTTAAAGCGAAGCATCTAGCCGCGGTCGAGGAGCGTAAAATTAAATCCCTAGTCGCCCTCCTAGTTGAGACCCAAATGAAGAAACTGGAGATCAAATTACGGCACTTTGAGGAGCTGGAGACGACGATGGAGCGGGAGCGCGAGGGGCTGGAGTACCAGCGGCAGCAGCTCATTACGGAACGCCAGCAGTTTCATCTGGAGCAACTGAAAGCAGCCGAGTTTAGGGCTCGCCAACAGGCGCACCAACGACTGCAAGCTGAGCAGGGGCAGCAATGGATGCAGCAGCAGCCTTCAACCGCACACGGTTCCGCGGAAACCGGCCCCAGCGCCACCCCCACCCCGCCATCGCCACAGGCGTCTGCAGTGGCGTCACCGGCGCCGCCACATCATCATATTTAA
- Protein Sequence
- MMPFGPKKDGSPNAKYFESAETLAALEIVKIWLQKNSKKYIMNDPLTNKTISTLVIQLMQFQEDNLGKNVQKPCITRIPIKFFMDFKPGGALCFMLTTAFKFKLEQGLRKFDFQISKNPGRTDKWLEMFQAMEKSLIQNKFYVPPTIYVKPEVEKNLAMKLKDIVKKRNGHVVESEMVATHVLYPHCDPLEEEYARPGMKQDKMILIHWYYFPESYDTWVNVEGALEGITPDLNPMHLSPWRVSSTWLLDSDQYNEWMSEEDYEVDESGRKKVHKMRMSVEDLMNPSSDADRKKKNKRKRSPSPQQKAGKRKSGRSPAVGKKPRPEDAESEDLTKDMEDPIPEPSVTEVCPTTSGQPGKKDHELLPLKGGSVTDMDETEERCEDSQTGKTSDVTPQEEGQEDNVTEQTHHIIVPSYSSWFDYNSIHEVEKRALAEFFNSKNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTPIGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTLLDLDRSQEVKKSETNDSITSFGLKLDQYSKKPGALKNKNAASLARDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPAALMDAHLKNVEASSTDGKYDPAAGLALSGIAGTVPEKEEDDKIKKEVEVKEEEKIEGVEQKKNGIEPPEEKIDDKLMKTESQDSDKEEKMDTSDPKPEKVVRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQQWMQQQPSTAHGSAETGPSATPTPPSPQASAVASPAPPHHHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00902171;
- 90% Identity
- -
- 80% Identity
- -