Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_963942505.1
Location
OZ012668.1:43719344-43721672[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5 1.5e+04 -2.4 0.0 13 42 26 55 20 58 0.61
2 3 8e-08 0.00024 22.6 0.0 2 38 266 305 265 306 0.87
3 3 4.1e-10 1.2e-06 29.9 0.1 3 44 348 393 346 395 0.90

Sequence Information

Coding Sequence
ATGAAGACTTTTTTACTGGTAATAGCTTGCTTTGCAACAAGCTGTTATGGTTGGGATACAGAACAGCTGGAAGTATTTGATGTTGTGGAGGAAGTCAAGGAGAATTTTTATGAGCTATTAAAGATTAATAAGaatGCTACTGGGTCTGAAATCAAATCAGCCTTTAGGCGGCTTACTGTTGTTCTTCACCCTGATAAAAATCCCAATGAAGATACTTCTGAGAAGTTTAGGAACCTTGTATCTGTATATGAGGTGCTTAAAGATGAGAAGAAACGTGGTTATTATGATGATGTGCTGATAAATGGCATGCCAAACTGGAAATCAGCAATGTATTACTATCGGAGAGTTAGAAAAATGGGACTTCTAGAAGGGTTTCTTATTGTCTTCTTACTTATTactattggacaatatttggtTGCATGGGCATCCTATTTTGAACAAAAATTTACActgGAGCAACAAATAAAACCAAAGAAGCAGAAGAAAAATGCTCCACCGCCTGTCACAATAATGGATATCCCAAAACCATCTGTTTTAAACACCCTGCCCATTCAAATCCCATACCTGTTGTACTACATCACCATATCAACTCCAAGTGCAGCTATATTTTTAGCAAAACAACTAATACCGGAAAAGAAACCGGTTGAAAGTGAAGAAGAGGAGGAGGTAGTCTATGAGCCCAAAGTAAGACGTAAACGGACTGGGTTCGCAATACCTGAAGGTCCAACCTTTGAAACACAGGAAATTGCTCAAGCACAAACACAGCATCAATCATCAGTCCCTGTGGTATCAGGGGGATTGTGGACAGATGATGATATTGATGAGCTAATCCAGCTGGTAAAGAAGTATCCAGGAGGAACTATGAAAAGGTGGGAGGTGATTGCAGAAAGTATTGGACGTTCAGTGGCTGAGGTTACATTTATGAAtaacaaattgaaaacaaatgGCTATCGGATGAATGCACAAGAGGAGGAGGTAGTTGAGGAGAAAGTGAAACAAAAGACCAAGGGTGGTAAACTAGCAGGTTCTGTTGAAGAAAGTGCTTGGTCACAAACTCAGCAAAAGGCACTGGAGGATGCTTTAGCAAAATATGCAAAGGGTGCTACAGGTCGGTGGGATAGGATTGCTGAATTAGTTGAAGGAAAGAGCAAAGAGGAGTGTATGTTGCGATATAAATACGTCGTTGAGATGATTCAGAAGAGGAAGGAGCAATAA
Protein Sequence
MKTFLLVIACFATSCYGWDTEQLEVFDVVEEVKENFYELLKINKNATGSEIKSAFRRLTVVLHPDKNPNEDTSEKFRNLVSVYEVLKDEKKRGYYDDVLINGMPNWKSAMYYYRRVRKMGLLEGFLIVFLLITIGQYLVAWASYFEQKFTLEQQIKPKKQKKNAPPPVTIMDIPKPSVLNTLPIQIPYLLYYITISTPSAAIFLAKQLIPEKKPVESEEEEEVVYEPKVRRKRTGFAIPEGPTFETQEIAQAQTQHQSSVPVVSGGLWTDDDIDELIQLVKKYPGGTMKRWEVIAESIGRSVAEVTFMNNKLKTNGYRMNAQEEEVVEEKVKQKTKGGKLAGSVEESAWSQTQQKALEDALAKYAKGATGRWDRIAELVEGKSKEECMLRYKYVVEMIQKRKEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-