Llun004477.1
Basic Information
- Insect
- Lordithon lunulatus
- Gene Symbol
- bab1
- Assembly
- GCA_963942505.1
- Location
- OZ012666.1:57518391-57544645[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-12 1.1e-08 36.1 0.0 1 39 358 397 358 401 0.90 2 4 2.3e-13 1.7e-09 38.7 0.2 1 39 412 450 412 453 0.95 3 4 2.7e-19 2e-15 57.7 0.0 1 45 467 512 467 512 0.98 4 4 6.2e-17 4.5e-13 50.1 0.1 1 39 519 558 519 561 0.95
Sequence Information
- Coding Sequence
- ATGACCTCTGTGTTCCACCAACTGCTGCAAAATGAGGCTTTCGTCGACGTCACACTGGCATGCAATGACCTATCCTTAAAGGCACACAAGGTTGTGCTATCGGCGTGTTCCTCTTACTTTCAAAAGCTCCTTTTAGAGAACCCGTGTAAGCATCCCACGATAATAATGCCACAAGACGTATGCTACGCCGATCTCAAATTCATCATTGAATTCGTATACAAAGGAGAAATCGACGTTTCTCAAGCGGAGTTGCAGTCCCTATTGAAAACTGCGGACCAATTAAAAATCAAAGGGCTTTGTGAATCGCCCGACGAAAAAGAAAGCGACGATTCGCCGTTCCCCTTCATTGCCCGGGAGTTTCCGAAACTCCGCAGGATCGGCTCCCCTAAACATTCGAACGGCACAGACAATAATAGGAAACACAAGTATAGAAAGCCGGAGAAAGTACTATCCAGTAAAGAAGCGGAAAGAGAGTCAGATGCCGGTAGTTCAGATGAAGAGGATAAGCCATCTGTGAATTCGAATGAGGAAAGAAGACGAAAGCAAGCGACGCCCGTGCAGAATAAACCGCTTAATATGAGCAGTAATGCCCTTCTAGCCGGACAGATGCTCTTCTCGCAGTTTGGTGTGGACAATGAAGACTTCCCCCCGGAGCCATCGGCGCCGACGGCAACACCTGTCGGACACGTAGACATGCAAGACCATTCACCGACTCGGACCCTACTCACAAACTCGTCCATACACAGGACAGACATTTCAGATTCGCATATAAAGTTTcaagatattaaaaaagaaatcgatattaaatttgaaacgTTACGATCATACGACCAGGATTCACTGCTGGATATCGATAGTTCGCATATGTCAGGGCCTGAGCACTCGATGGATAGCCACGAGGATCAGGACCAGTCTATGCACCATACGACTATGATGATTACACCCGAGCTTATGGGGATGATGCCGGGTGGATCACATCATATggATCCAAATATGGACCATTTAATGAATACTAATGGACATTCGGAACATATTCCGCCTGTTCGGCATGGAGGTGGCCCGAAAACATGGACGCAGGAAGATATGGAGTTGGCCCTGGATGCGCTACGAAATCATAATATGAGTTTAACAAAGGCTTCAGCGACATACGGTATTCCCTCAACGACTCTGTGGCAGCGAGCCCATAGATTAGGCATAGATACCCCAAAGAAAGAAGGCCCTACAAAATCATGGACTGAAGAAAGTTTAAACTCTGCGTTAGAAGCGCTACGAACTGGTACAATTTCTGCAAATAAAGCTAGTAAAGCATACGGAATACCTAGTAGTACCCTGTATAAAATAGCAAGACGAGAGGGCATCCGACTAGCAGCACCTTTTAACGCAGCACCTACCACTTGGACACCGGAAGATCTAGAAAAAGCATTAGAGTCAATAAGAACAGGGCAGACATCAGTACAAAGAGCGTCAACTGAATATGGAATTCCAACAGGTACACTGTACGGAaggtgtaaaagggaagggatTGAGTTATCACGATCGAATCCAACACCATGGTCGGAGGATGCAATGGGAGAAGCTCTTGAAGCAGTTAGATTAGGCCACATGTCAATAAATCAAGCAGCAATACACTACAATCTGCCATATTCTTCACTATATGGTCGATTTAAACGAGGAGCAAAATACGACGTAGATCCTTTGGATATTAATGCAGACAGCCAATCACACCTCGAAGGACAACAAATGATGATGGACTACTCTAATTCCCATCATATACAATACCAGCATCAATCAAATAGCTGA
- Protein Sequence
- MTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCESPDEKESDDSPFPFIAREFPKLRRIGSPKHSNGTDNNRKHKYRKPEKVLSSKEAERESDAGSSDEEDKPSVNSNEERRRKQATPVQNKPLNMSSNALLAGQMLFSQFGVDNEDFPPEPSAPTATPVGHVDMQDHSPTRTLLTNSSIHRTDISDSHIKFQDIKKEIDIKFETLRSYDQDSLLDIDSSHMSGPEHSMDSHEDQDQSMHHTTMMITPELMGMMPGGSHHMDPNMDHLMNTNGHSEHIPPVRHGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGAKYDVDPLDINADSQSHLEGQQMMMDYSNSHHIQYQHQSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00920766;
- 90% Identity
- iTF_00920766;
- 80% Identity
- iTF_00920766;