Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963942505.1
Location
OZ012674.1:3053625-3069479[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.8e-24 4.4e-20 73.3 0.0 2 89 139 222 138 222 0.95
2 2 4.5 2.5e+04 -2.8 0.0 33 68 1314 1350 1301 1366 0.61

Sequence Information

Coding Sequence
ATGGTAAAGAGAAGGAAGAGGTGGTACCCCCAATCCCGGGCTTTGCGTAGAAGACTTTTGGCTAAAAAAGCACGTGATGCAATGGGCACCAAAGAGAGAATTGCCAGTCCAACACTAAGCACTGGTACAGGAAGCTGCTCCAATGATTCAATCAATCAATCCAACAAAGCACCTCCACCACTTGCATTTGAATTCATTGTGCCCCCAGAGGCACCTGTCTTCAATCCAACTGAGGAAGAGTTTGCAGACCCACTTGTGTACATTGATAAAATTAGACCTATTGCTGAGAAGTATGGAATTTGCAAAATCAAACCCCCTACTAATTGGCAGCCGCCTTTTGCGGTGGACGTGGACAAGTTGAAATTCACGCCTCGCATCCAGCGGCTGAACGAGCTGGAGGCGAAAACGCGCATCAAACTGAACTTTCTTGACCAAATCGCCAAGTTTTGGGAGCTGCAGGGCTCCGCTTTGAAAATACCCATGGTCGAAAAGCGCGCTCTTGATTTGTACACCCTGCACCGGCTCGTGGAGAATGAAGGGGGCTTCACGGGGGTCACGCGCGATCGCAAGTGGGCGAAGGTGGCTGTGTGTATGGGCTACCCGCAGGGCAAGGGAATCGGCACCATCCTGAAAACGCATTACGAACGACTGCTGTATCCGTTTGAGTTGTTCACTAAGGAAAAGTCGGTGCCGATTAAATCGGAAGACATCAAGAAAGAGAAGGAGGAGGTTGAAAAAGAGTACAAAGCTTCAAAAACCCGTTTAATGCATCACATGAACGGTTTGACAAGTCCTAAGAAAAATGGTTATTCGCGGCGTAGTAAGGGCAAGGAGCCTTTAAACGGTGATTTAGCCCCTATTAAGAAAATCCAGAAAGTTGAAGTGAAACAGGAAGTGGTGACCGGGGAAGAAGCGAAAACTCCGGTGGCACAGGCTGGGCTGAATGCGAATTCTCCAGTAAAAACAGAGCCGGGCGTTAAGACCGAAATGCCTGTTCTATCCAAAGAAAACGTTATTGATGAGACTGAGAGTGAGGATAATAAGGAATTGAAGAGGCTTCAGTTCTATGGCGCTGGCCCTAAAATGGCTGGCTATAATACTATGAAGAAGAAGGAGGATAAAACGCGTGGgaaaattattgattataattttgatattgatCCACTAGCGAAATATGTTTGTCAAAATTGTCGGCGAGGCGATTCTGAGGAGGACATGCTGCTCTGCGACGGTTGTGATGATAGTTACCATACTTTTTGCCTTATGCCGCCACTTGCAGAGATCCCCAAGGGGGACTGGTGTTGTCCCAGATGTGTTGCAGCTGAGGTTTCCAAGCCTACTGAAGCGTTCGGGTTTGAGCAAGCACAAAGAGAGTACAATTTACAGCAATTCGGAGAAATGGCCGATACGTTCAAGTCAGAGTATTTCAATATGCCGGTCCATCTCGTGCCTACAGCAATGGTGGAGAAGGAGTTTTGGAGGATTGTTTCCTCGATTGATGAAGATGTTACGGTTGAGTATGGCGCTGATCTGCATACGATGGATCACGGCTCGGGATTTCCAACTAAAGATTCGTTGAATTTGCTACCGGGGGATCAGGAGTATGCGTATTCTGGATGGAATCTAAATAATCTACCCGTTTTGGAAGGATCTGTGTTGGGATATATTAATGCAGATATATCTGGAATGAAGGTCCCCTggatgtatgtaggtatgtgtTTCGCGACATTCTGCTGGCACAACGAGGATCACTGGAGTTACTCCATCAACTATCTGCATTGGGGTGAGCCGAAAACGTGGTACGGGGTATCCGGTACTAAGGCTGAGCTGTTTGAAGAGACGATGAAGTCTGCAGCACCAGAATTGTTTCAATCGCAACCTGATCTGTTGCACCAACTTGTTACTATTATGAATCCGAATATTTTAATGAATGCTGGCGTACCTGTTTATCGAACGGATCAACATGCCGGCGAATTTGTTATAACTTTCCCACGTGCCTACCATGCCGGATTCAACCAAGGatataatttCGCTGAAGCAGTTAATTTCGCTCCCGCCGATTGGGTGGCCATGGGTCGGGAATGTGTCCTACACTACTCGCAGCTTAGAAGATTTTGTGTCTTCTCACACGACGAACTCATTTGTAAAATGGCTACGAATGCCGAAAAAGTAGACATAACGGTAGCAGCAGCAACATACACAGATATGCTGCGAATGGTTGATTCGGAAAAGAAGTTACGGAGAAGTCTTCTTGATTGGGGCGTGACGAGTGCGGAACGTGAAGCATTCGAACTCCTCCCCGACGACGAACGACAGTGTGAAGTTTGCAAAACCACATGCTTCATGTCAGCCTTAACGTGCAGTTGTACAGCAGAGGTGCTTGTGTGCCTTCGTCACTACACGTCAATTTGCAAGTGCCCTCCTAGTAAACACACATTACGATACAGGTATACCCTGGACGAGCTCCTGCCGCTCCTAAGAAGTTTAAAACAAAAGGCGGAATCGTTCGATCGCTGGGCGGATCGAGTCAAAGCAGTCCTGGACCGCAAAAATCCCAAATCCGTCGATTTAAACGAATTAAAACAACTACTGACGGAAGCCGATGGGAAGAACTTCCCAAAATCAGACCTATTAGCAACGTTGGCTAATTCGATCGAAGACGCTGAGAAGTGTGCAAGCGTTATTCGGCAATTAGACCTGAATAAAGTGCGTACAAGAAACTCGCTCGATAATAAAAGCAAACTGACCATCGAAGAACTTCGTTTATTCTGCGAGGAAATCGATAGTTTAGCGTGTGTGCTGGACGAggaaaaaattatgaaagaacTCCTAGAGAATACAAATCGTTTTCAAAGAGACAGCACGCGTATACTAGGACTAGAACTGAAAGAATGCACCCTGCTAGACGTTGAACAGCTGTTGGAGTTCAGCAATGGGTTATGCATTGAACTACCATTATTGAAACCCTTAAAAGACCGATGTAATCAATTGAAATGGATACAAGATGTTTACGACGCTAGAAGTCGCGAGGCGGATATTGCCGACATTGATACATTAAAGGAACTCCTGAGGAAAGGCTTTACACTACCTGGCGATACGCTTATTGAGAACATCTTAACAGGCGTGCAGACGACGATAACGGAAGCCGAGGATTGGGAGGAACAAGCTCAGGCGTTGTTTAAAAAGACTGGAATAGATATCGTTGTAGAAGCTgagaaactaataaaaatagctGGTGATATTGATGTATATTTGCCCACAGAAAACTTACTGGTCGATAACGTCAATAATGTAAATGACTGGTTCAGACAACTACAAGAGTTGAACGCGCTGGAATTCTACCCGTACCTATCCGCTATCGAGGAGTTGCTTAAGAAAAGCCGCCATTTTCCATTCCACCTCGATGAGGTTGACCGGTTGAAAGGCTATGTGTCATCCGCGACGAATTGGAAGGACAAAACCGCCAAAACGTTTCTACGAAAAAATTCCGCTTGCACCCTTATGGAAGCTTTGTCTCCACGAACGCAGATGGTTTCCTATAAAGGCCGTAAAAAGAATAACGAGGATTGCATACGGTTAGGCGAGAATATGGACCCGGCTTCAGTTGTCGCCGCTTTTAAGGACGCCGAAGATCGGGAAATGAGATTAATACAAAACCTGCGAGTAACAAACCTGGCGAAAACTGTATCTCTTACCAGTGAGTCAACATTTTGTGTCTGCCAGAAAAACGCGCGAGGTGTCATGATGCAGTGCGAACTATGCAAAGACTGGTTCCACAGCAACTGCGTACAATTACCAAAACTGGCTTCAAACCGATTACGCAAGAATATTAAATCAGTTGCTCTCCATATCGGCTTCAGGGATTGTAAATTTTTATGTACAAATTGCGTTAGAACTAGGAGGCCACGGCTGGAGACTATCCTAGGGCTGCTAATGTCTCTGCAAAAATTGCACAGCCGCCTGCCCGAAGGCGAGGCACTGCAGTGTTTAACAGAGCGCGCTATGAACTGGCAGGATCGTGCCAAGCAACTACTGCAAAACCCCGAACTTGCGACGGCCATCAACAAACTAACCAGCATGTCGCAGAAGTACTCGGAGGCATCTGCACGCATGAAGACTGAAAAAATCATCACTACCGAGTTGAAAAAGGCAGCTAACAACCCGGAGCTGCACAAGCGCGTGCAGGAGATCACCGCCATGAGCGGGATTAACGATGAGAGCTCGCGCTCGTCGCCTTCGTCGGACGAGGAGGACTGCAAGGAGGAGCATGCTTACTCCATGAGTATCTCCAAGGTCGACAGTGAGAGCGAGTGCTCATTGTCGATGAATTCGCAGTCACGGGAGCATATTGAGGGGCTTGTGATGGAGGGTGATCTGCTCGAGGTATCGCTGGATGAGAATCACCATTTATGGCAGCTGTTGTTGCTGTCAAGGGATTTGGATAAAGATCCTCTAGTTATAGATTTTGATCTTCCACCAAAATTGAACAACTCTGGTTCGGGCGCCAAGAAAGGTCGTAAGCGTCGTTCGGAGGAGATAGAGTTGAAAGCGGCCATCAAGAAAGAGCTGATCAGTAAGAAAGTGAAAGGCCCACGTAAGACCAAAGACAATTCCATGCGTGAGGTAAAACAAGGTCGCAAGCGAAAAGCCCGCGGCGTGAACAACGATCAGATGAGCGACGACGACGATGACGACGACGGCGACGAGGACATGTGCGCCGTGTCCACTTGCATGTTGCCCAGTGGGGATGAGGTCGATTGGGTGCAATGTGATGGCGGCTGCGAGCAATGGTTCCACATGGCATGCGTAGGTTTATCAGTGAAAGACATAAACGAGGATGAGGACTATATCTGTTCGGCTTGCTCGCCGGACACTGTTAAACATAGGCTGTCGCAGGAACCTAACATAGTTATAGAGTTTTAG
Protein Sequence
MVKRRKRWYPQSRALRRRLLAKKARDAMGTKERIASPTLSTGTGSCSNDSINQSNKAPPPLAFEFIVPPEAPVFNPTEEEFADPLVYIDKIRPIAEKYGICKIKPPTNWQPPFAVDVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSALKIPMVEKRALDLYTLHRLVENEGGFTGVTRDRKWAKVAVCMGYPQGKGIGTILKTHYERLLYPFELFTKEKSVPIKSEDIKKEKEEVEKEYKASKTRLMHHMNGLTSPKKNGYSRRSKGKEPLNGDLAPIKKIQKVEVKQEVVTGEEAKTPVAQAGLNANSPVKTEPGVKTEMPVLSKENVIDETESEDNKELKRLQFYGAGPKMAGYNTMKKKEDKTRGKIIDYNFDIDPLAKYVCQNCRRGDSEEDMLLCDGCDDSYHTFCLMPPLAEIPKGDWCCPRCVAAEVSKPTEAFGFEQAQREYNLQQFGEMADTFKSEYFNMPVHLVPTAMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKDSLNLLPGDQEYAYSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVSGTKAELFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWVAMGRECVLHYSQLRRFCVFSHDELICKMATNAEKVDITVAAATYTDMLRMVDSEKKLRRSLLDWGVTSAEREAFELLPDDERQCEVCKTTCFMSALTCSCTAEVLVCLRHYTSICKCPPSKHTLRYRYTLDELLPLLRSLKQKAESFDRWADRVKAVLDRKNPKSVDLNELKQLLTEADGKNFPKSDLLATLANSIEDAEKCASVIRQLDLNKVRTRNSLDNKSKLTIEELRLFCEEIDSLACVLDEEKIMKELLENTNRFQRDSTRILGLELKECTLLDVEQLLEFSNGLCIELPLLKPLKDRCNQLKWIQDVYDARSREADIADIDTLKELLRKGFTLPGDTLIENILTGVQTTITEAEDWEEQAQALFKKTGIDIVVEAEKLIKIAGDIDVYLPTENLLVDNVNNVNDWFRQLQELNALEFYPYLSAIEELLKKSRHFPFHLDEVDRLKGYVSSATNWKDKTAKTFLRKNSACTLMEALSPRTQMVSYKGRKKNNEDCIRLGENMDPASVVAAFKDAEDREMRLIQNLRVTNLAKTVSLTSESTFCVCQKNARGVMMQCELCKDWFHSNCVQLPKLASNRLRKNIKSVALHIGFRDCKFLCTNCVRTRRPRLETILGLLMSLQKLHSRLPEGEALQCLTERAMNWQDRAKQLLQNPELATAINKLTSMSQKYSEASARMKTEKIITTELKKAANNPELHKRVQEITAMSGINDESSRSSPSSDEEDCKEEHAYSMSISKVDSESECSLSMNSQSREHIEGLVMEGDLLEVSLDENHHLWQLLLLSRDLDKDPLVIDFDLPPKLNNSGSGAKKGRKRRSEEIELKAAIKKELISKKVKGPRKTKDNSMREVKQGRKRKARGVNNDQMSDDDDDDDGDEDMCAVSTCMLPSGDEVDWVQCDGGCEQWFHMACVGLSVKDINEDEDYICSACSPDTVKHRLSQEPNIVIEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-