Basic Information

Gene Symbol
hang
Assembly
GCA_018904235.1
Location
JAEIFU010003437.1:3189-23522[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.33 14 6.2 1.0 3 23 287 308 286 308 0.93
2 18 0.24 10 6.6 3.5 3 22 416 435 414 435 0.89
3 18 0.0007 0.031 14.6 3.3 1 22 525 546 525 548 0.90
4 18 0.081 3.5 8.1 0.1 2 21 560 579 559 580 0.93
5 18 0.00082 0.035 14.4 0.2 2 23 707 729 706 729 0.95
6 18 0.0023 0.1 12.9 0.1 1 23 737 760 737 760 0.96
7 18 1.9e-05 0.00083 19.5 0.1 2 23 845 866 844 866 0.97
8 18 0.00034 0.015 15.6 2.9 2 23 950 972 949 972 0.97
9 18 0.099 4.3 7.8 0.2 2 23 981 1003 980 1003 0.94
10 18 0.00061 0.026 14.8 0.2 1 23 1016 1039 1016 1039 0.98
11 18 0.00015 0.0064 16.7 1.1 1 23 1078 1100 1078 1100 0.99
12 18 0.0023 0.099 13.0 0.9 1 23 1108 1131 1108 1131 0.96
13 18 0.32 14 6.2 0.4 2 19 1139 1156 1139 1157 0.93
14 18 3.1e-05 0.0013 18.8 0.4 3 23 1239 1259 1238 1259 0.98
15 18 0.0059 0.26 11.7 0.1 1 23 1294 1316 1294 1316 0.97
16 18 2.4 1e+02 3.5 0.1 3 20 1365 1382 1363 1384 0.91
17 18 0.0075 0.33 11.3 0.3 3 23 1399 1419 1399 1419 0.98
18 18 0.00011 0.005 17.0 2.2 1 23 1535 1557 1535 1557 0.98

Sequence Information

Coding Sequence
ATGGGTAATCATCAACTTGAGAAAGAGATGTGGAGTATCACGCCACAGGATCGTCTCTCGCTGCACATTTGTCATGCCTGCATTAGCTATTTGAACTCGTGGCAAAGCTTTAAGAATCGTTGCATTAGCTCACAGTCAAAGCAGCGCCAATGGCTGGATGCCAACAAGAGTAAACTCTTGAGCTATTTGGACTTGAACAGTGCAGAGAATGGCGGCGCCTCCACAGATCATCAGCTGCAGCAGCAGACAGAGAATGAAGCAGCCGCCTCTATTGCCGCCGTCGCCGCTGCCGTTGACTTGGTGGAGAAGCCGGCCTCTACATCATCGCCCAAAATGTTTTTACCCTTGGACATAAACGTGCCGCCGTCCACTGCTGTGCTGGGACACTTGCCATTGTCGTCGTCTTCGTCGCTGCTACTTGACGTCAGCCAGAGCAGCGCATTACCAGAGCCGCTGTCATTGCCGCCACCGCCGCCGCCGCCGTCGTCTCTGGGCCAGGGTGCCAGCGTCGTCTCCGCTTCAACGCCGCTGCTCATGCCGGTGACGCTGCAGAGCGCTGCACAGCAATTGCGCTTTTTCAGACGCTACTCCTATAATCCGCTGCCCGCCATGCCTATCAAAGACGAGCCCATAGACACGGATGATGACTATCAAATGAAGTCGATAGACGAATCTGACGACATGGTAGACCCCACTATGTTCCTAGAGCGTTCCGAGCATGAGGGCGATGTGCCGCTTATGGCCTCTGACTACGATTACACAGCTCAGCATGGCGTGAATGCTGCCGCTGCGGCTGCTTCGCTTCCACCCAGCGCTGTGGCCAATGTGGCCGCTGCTGGAGACTCAAAGGTGGCCAGCTGTCGCGCATGCAGTCTGCAGTTCTCCACACGCGCCAATGCCCGACGTCATGAACGGAATTTGCATCCGAATCTGTTTCAACTATCAACAGATTCGCCCAATAACACGCCCATTACCAAACCCACACCAGCCTTGGCTGCTGCCTTGGAAATACAGCGAGCTGCCGCTGCCGCCGCCACCGCGGAGGCCAACAGAGCTGCTGTAGCAGCTGGCGGCACCATTTCGGCGCAGAAATATCGCCAGGTGATGATGAATGCATTCATCAAATGCGAGGGCGGCGGCTACGACTACGACAATCCCGAACAGTATCAAGCGCTGTTAAGCCGCGACAAGGTGGAGTTCATTGAGCAGAATGCCGAATTCCTGGAGCAGTACCAGACCATGACATGCCGTTGCTGCAACAAGTTCTTCAGCACCTACAAGAACTTCATGGCCCATGTGCGTAAGAAGTATCCGCTGCTGCCGCGGAACCTTTGCTTTAATTGCCTCAAAATGAACGACTCGAAGGCCTTGTTCATTTCGCATCTGAAGAAGCGCAATTGCATCAATCTGTATCGTGTGCTGAATGCCTTGCGTCAGCCTCCATCCATTGCCGATAACCCACTTCCGGCACCGGCCGCGGCTCCCGCTGCCGCAGTGACCGCTGCCTTGGAAACCAGCGGCCCAGAACGCCCAGAAAAGCTGAGGGCCAAGGAGCTGCTGGTAAACAAGCTGTACGAGTGTAAACTATGTCCCAAGGGCTTTCGCACCAAGCACGAGTTTCGCACCCATGTCTATGACAAGCATGCGGATGTACAGCGCAAGGATAACAACTCCATTCAGTGCAGTTTCTGTGGCCTGGACTTTGCCGATCCGGTGGACAGGCGGCGGCACTACAATAACATGGACTGCATTGTCCGCTTGCGCTGCATGACCTGTGATGCCAAGCTGGAGACCCATCAGCGATTTCTGGACCATGTCTATCAGGATCACTTGGGCGGCATCAGCAGTGACAATGCCTCCACTGTGAGTGGCGGCGCTTTGGCCACCAGAAGCAACAGTGTGGAGCACTCGCCGGGAAAGCGCAGCCTGTTGGGTGCACTGGGCATAGCTGTGGGCAATTCCTCGGCAGATGAATCGCGTAGCAGCAGTGTGGCTCCACCGCCGCTTACTTCTACACCCAAGCCAACGGGTCTGGTGGGTGGTGCAGCTGCTGCCGCAGCAATGGCGGCCGCCAATCGGGAAACACCCAAATCGCAGTATTTCAGCCGGATGCCTCAGGTGTGTCCCATTTGTGGACAACAGTACAACAACTATAATAATGTGCTGCGTCATATGGAATCCAAGCATCCCAACAAACTGCCCGAGACCTACAAGTGTGTAAGATGTGGCCTGGGCTATCCAAGGATCTCATATCTCAGGGAGCACATGATTAATGTGCACGGCGTGGACAAGAACCGGCACTCGGGCGGCTTCGAGTATATAGTGAATGCAGATGCCGTCAAACTGGCCGATGGCAGCACGCCCAATGTTTATACGGGGCGCTATGACTATGTGATGAAGGATTTGATGTCCATAACAAATGGTGGGACACTCGATGACGATGAGGAGGAGAATGGCAGTGTGGCCAAGAAAATGCGCCTGGACGACAGCAGCAACAACAGCAGTCTAGCGGGCGTGGCCAATCAACAAAAGGAGTGTCCCATTTGCAATGCAGTATTCAGCAACAACATTGGCCTCTCGAATCATATGCGCTCGCATTACACCTCGAGTGCCACAACTGCAGCCCTGGCCGCTGCCAATCGCATGACACCCAAATCGTTGACCATAACAGCAGCTCCGCCAGCCACTGAAACCACCAGCAACAACACCTCCGGCGGCAGTGCAGTGACTGCCACTGCAGCAGCAACCGTCGGCACTCCACCCGCCATGGTCAACCAGACACCCCAAGAGCAGGCTGTTTTCCGTCGAAGTCTCGACCAGGCCGCAGACCGTCGCTTCCGTCGTATGCGTTGTCGCATCTGTCAACGTCGCTTTAGCTCGAAGAAATCCTACCGCTATCACATGCTCACCGACCATCAGGTGCAGAATGTTCAGTTCATCAAGTGTCGCCTCTGCAATGCTGAATTTGCCTACGAAAAGGGTCTCAAGGTGCATCTCTTTAAGGTGCATGGCCGGGCCATCAAGGATGAGATGATTATCAAGCAGTTCGAGTGCGAGATTTGCTCTATTGTTTACAGTTCCGAGCTGGAGCTACAGCAGCATAAACGCACTGTGCACAAGATCTCAACGGCAACCACCATTAGCAAAATGGAGCCACAGGAGGATGAGAAGTCAACAGTGGCTGCCGCCGTCGCCACCACCACCGCCATCTCAACGACTCCGCTCTATTGGTATCAATGCAAATATTGTCCATCCAACTTTAATACCAACAAAAAGCTGGCCATACACATCAATTCGCACGACGAGTTTGATTCGAATGATTATTCATGCAAGGATTGCGGCAATGTGTACAGCGGACGGAAGAGTCTCTGGGTGCATCGCTATAAGAAGCATCCACAAGTGCCGGATCCGGCCGAATGCTCACTCTGCCGCAAGGTGTTCTTTGATCGACAAATGTTGGACAATCATACGCCCACATGCAATCGCAAACCGATTACCTCCACCGGAGCTCATCAACAGCAGCAACCGGATGCCTCACGTAGTGTCGGTGGAGTTGTATTCAGGCACAAGACCGGCGATGATGATGAAGAAGACGATGAGGAGCATATGCCATCGCTACAGCTGGAGGATGGGGAAGGAACGACTGGCAATGCCGTCAACGCCGCCGCCTCCTCATCTAATAGTAACCTCAAGATACGCATACCGGAAGTGGCCTGCACCATTTGTGGCGCCCGTTTCACGGATCAGGAAATGTTCACCAAGCACATACAGAAGCACGAGCAAGAGCTGTATGTGGATAACCCACTGGCTGCCATGTTCGATGATGGACCCGCCGATCCCGGCCAATTCCAGGTGGAACGGCAGAACGAGAATGGGGAATATGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATTGCACTTAAAGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACACAACAACAATCTGCGTCGTCACATGTATGAGCTGCACAAGCACGAGGTGAGCCATTTGCCCGAACCACCAGTCATTGTGGTGGATGACCCACTGGCCTGTCGTCGCTGCAATCTGAAATTCGAGACCAAGGAACTGTGGATAGAGCACAAGCTGGGAGATGCCAAGGTTGTGCGTCCATTCTGTCCCTTCCAGTGGGGCTGTGATTTGTGTGGCGAGTACTTGTCGCGCAAGGAGAAGCTCATCAATCACATCAACAATCATCTCAAGGAGGAAGTGATAGTGCCACTGAAATTGAACAATGACGAGCAACTGGTTGAGGTGGAGGATGTGATTAGCTCAGATGCGGATGAGGAAGATGATGAGGAAGATGACGATGAGGAAGACGAGGATGATGATACCGAGGAGGAAATGGCCCCTCCGCCCATAATGAACGAGGAGTATGATGAAGATGATGTGGAGGATGATGGCATTATCGAAGAGATGTCCACATCTGAGAGCGAATCGACCACCACCACATCGCATTCAACGGGTGAGCGGCGTAAAAAAGCAGCAGCGTCATCAGCAGCAGCGACTGATGCTGCTGCTGCCCTGTCTAATAATCCCAGCTTCACGTGTGATCTATGTCAACTTTGTTTTGATTCTCAGGAGCTACTCCAGACACACATCAAAAGTCATTTTCTCAATGGGCCAAAGGTGACGAAGATGAAGACAGTGACGACGACGATGTCGCCGCCGCCACCGACAGTGGAGAGCCACAATAGTAAATCTGCTGAATTGGAGGAGGCCAATTGA
Protein Sequence
MGNHQLEKEMWSITPQDRLSLHICHACISYLNSWQSFKNRCISSQSKQRQWLDANKSKLLSYLDLNSAENGGASTDHQLQQQTENEAAASIAAVAAAVDLVEKPASTSSPKMFLPLDINVPPSTAVLGHLPLSSSSSLLLDVSQSSALPEPLSLPPPPPPPSSLGQGASVVSASTPLLMPVTLQSAAQQLRFFRRYSYNPLPAMPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDVPLMASDYDYTAQHGVNAAAAAASLPPSAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAATAEANRAAVAAGGTISAQKYRQVMMNAFIKCEGGGYDYDNPEQYQALLSRDKVEFIEQNAEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRQPPSIADNPLPAPAAAPAAAVTAALETSGPERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGISSDNASTVSGGALATRSNSVEHSPGKRSLLGALGIAVGNSSADESRSSSVAPPPLTSTPKPTGLVGGAAAAAAMAAANRETPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDEEENGSVAKKMRLDDSSNNSSLAGVANQQKECPICNAVFSNNIGLSNHMRSHYTSSATTAALAAANRMTPKSLTITAAPPATETTSNNTSGGSAVTATAAATVGTPPAMVNQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCRLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEICSIVYSSELELQQHKRTVHKISTATTISKMEPQEDEKSTVAAAVATTTAISTTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKVFFDRQMLDNHTPTCNRKPITSTGAHQQQQPDASRSVGGVVFRHKTGDDDEEDDEEHMPSLQLEDGEGTTGNAVNAAASSSNSNLKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPADPGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATHNNNLRRHMYELHKHEVSHLPEPPVIVVDDPLACRRCNLKFETKELWIEHKLGDAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEEVIVPLKLNNDEQLVEVEDVISSDADEEDDEEDDDEEDEDDDTEEEMAPPPIMNEEYDEDDVEDDGIIEEMSTSESESTTTTSHSTGERRKKAAASSAAATDAAAALSNNPSFTCDLCQLCFDSQELLQTHIKSHFLNGPKVTKMKTVTTTMSPPPPTVESHNSKSAELEEAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-