Lsta004889.1
Basic Information
- Insect
- Lordiphosa stackelbergi
- Gene Symbol
- NCOR1
- Assembly
- GCA_018904235.1
- Location
- JAEIFU010001139.1:1-21824[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-08 7.6e-05 22.6 0.0 3 43 480 520 479 522 0.97
Sequence Information
- Coding Sequence
- CCTCTCTCACCGCCACGCCCTGGTCCTGGAAGTGCGGCCGCAGCTGCCAACACCTACACCAAGTTCGGAGATGCCCCACATCGCTTTCAGCCGTGCACGTTTATGCCCACTTACCGTGAGAGTCCCTACACACGGATACCTCAAATGCAGGCCTCGGTGCCGCCGGAATATCAGCGAGCGGCGGCCAGGGCAGCTCCAGTGGGTGGCAAGTCAGGTGGAGGCGGTTCGGTGCAGTCTGGAGGCGTCTTGAGTAATCATGGTCCCGCCGTCTATCACATGTCCTCAGCTGGCCAACCGGGAGGTCCTCCCCAGGCAGGCGGTGGTGGTGCCTCTGTGTTGACTCCTCTCACCCTGCAGCAACTGAAAGTGGAAACACTGCCGCCTCAGCTGACTTCTGCAGCTCCACACACACCCCGAGCACCACCACCCTGCACCAGCAGCAGCTCCCTGGCCGTGACTGTCTCCACGGCCGCAATTAGCTCTGGCATTGGTTCCACTAGCACCACCACCACCACCACCAGCTCCTCCTCCTCCTCCAGCACAGAGGCCTACCATCCCCAGGTGGAGGCCATTTCACCCACTTTGCCCAGCGATAATGCCGAGGAACGTGGACGTACCAGCGCCAAAGAGGATCTCCTTATGCAAATCCAAAAGGTGGACAACGAGATCAAATGTGCTGAAACCACCATGGAAACGTTGCGCAAAAAGGAGAAGTCGTTGATGGAGGAAGCGGCAGCGGCCACCAAACAGCAGAAGGCAGCTGCCGCTGCCGCTGCCGCCGCCGCCCAGTCAGGCGACGAGGTCGTCGAGCTGGCCTGGCGCAACCAAATGCTGGCGGAGAAAATCTACGCTGCCAATCGGAAAATGGCCGCCGCCCAACATTCCCTGCTGAGTCAAGCGAGTGGCGGAGCTCCGCGCCCCAACGAATGGCTGCCGCTGTACAACCAGCCCCTGGATGTGGATGCTCTAACGGCGCTGATCAAGCGCCATCAGACGCTCATCAAGGCCCCGCTTCTGGTGCACATACGCAAACTCAAGGCCGAACGCTGGGAGCACAATCAGTGTCTGGTGGACAAATATGCCAAGGATCAGGCCGACTGGCAGCGACGCTGCGAGCGGGCCGAGTCGAGTGCCAAGCGAAAGGCGCGCGAGGCCAAGAACCGCGAGTTCTTCGAGAAGGTCTTCACGGAGCTGCGCAAACAGCGCGAGGACAAGGAGCGCTTCAATCGCGTGGGCTCGCGCATCAAGTCCGAGGCCGATCTCGAAGAGATCATGGACGGACTGCAGGAGCAGGCTCTGGAGGACAAGAAGATGCGCTCCTATGCGGTCATTCCCCCGCTGATGTACGACATACGGCAGCAGCACTGCGCCTACCACAACGAGAACGGTCGCATCGAGGACATGGTGGCGGTGCATCAGGAGCGCAAAGCCCTCAACATGTGGACCGCCGGCGAGAAGGAAACGTTCAAGGAGAAATACCTGCAGCATCCCAAGAATTTCGGCGCCATTGCGGCCAGCCTGGACCGCAAGTCGCCGCAGGATTGCGTCCGCTATTACTACCTCAGCAAGAAGACGGAGAACTACAAGCAATTGTTGCGCAAATCACGCCAACGCACGCGCAGCTCACGGAATCCGGCCAAGGCGCAGGCGGCACAGCCGCAGTGCATCATTGATTCGCTGACAACGGGTGTGACGACGCGTCTGCAGCGGGAACAGCAGCAAAAGTCGGGCAATCGCTCGTCGGCCGTGGCCGAACGAGTGCGTGTGGCCGAGAAGGCGGCCGCGGATGCAGCCAAGGCGGCGGAGACGCCCAAGGCGAAAACGGAAGTCAACCCGCTGGATGCAACAGCCAAGCTAAATGAAACGTCACCGGATATAATAAGCGAGCAAATGGCCAAGGGCAATAAGAACAGTAATGCAAATGCTGAGGGTTATAATGTCAATGCCAACACCAGCAGCAATGCCACATCCGCCTCGTCCTCCTCCTCCTCCTCCTCCACCACCAACACCACAACAGCCACATCAGCCCCACCAGCAGTAAGCGTGGCTCTAAATGGCTTTAAGCCTGGCTACCAAAGTGTGGTTATGGCCAATGTTAAAACAGTGTCCACGTCTGGCAATGATGAGGCGTCATCATCATCCCTGAATGCAGCAGCAGCAACAACTGGTGGAGCAACACCAGCAACAAATCCCTCATTAGGCGATAAAATCGTCAAGACAACGCCCACATCCAGTGCCTCTTCCGAGGGCAGCGGTCTGACCACGGCCACAGCAGCCAGCAATTATCTGGGCCAAAAGCTCAAGGCAGCCCAAGTGGAAGGTCTGGGTGCCGGCAATGAGCTACACTCCGATGTTAGTGATCCCAAAAAGAAACGTTATGACCTGACGTCAAGTGAAAGCAACAGTGGGGCGTCCCATACAGCAAATGCCAATGCCAGCCATGTCACCAGCAATAGCTGCAGCAGTGGTTCTGCGGGTAGTACCACGCCAGCGACCACCATGTCCACGTCCACGTCCACGCCCATGTTGACAGACGGTAGCAATGCCAATATGTTAAATGCAGGCGAGGTGCTTGGCTGTTTGGATGGCAAAGTGAAGCATGACTTCGGCAAGCATTCGGTGTGA
- Protein Sequence
- PLSPPRPGPGSAAAAANTYTKFGDAPHRFQPCTFMPTYRESPYTRIPQMQASVPPEYQRAAARAAPVGGKSGGGGSVQSGGVLSNHGPAVYHMSSAGQPGGPPQAGGGGASVLTPLTLQQLKVETLPPQLTSAAPHTPRAPPPCTSSSSLAVTVSTAAISSGIGSTSTTTTTTSSSSSSSTEAYHPQVEAISPTLPSDNAEERGRTSAKEDLLMQIQKVDNEIKCAETTMETLRKKEKSLMEEAAAATKQQKAAAAAAAAAAQSGDEVVELAWRNQMLAEKIYAANRKMAAAQHSLLSQASGGAPRPNEWLPLYNQPLDVDALTALIKRHQTLIKAPLLVHIRKLKAERWEHNQCLVDKYAKDQADWQRRCERAESSAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMYDIRQQHCAYHNENGRIEDMVAVHQERKALNMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAAQPQCIIDSLTTGVTTRLQREQQQKSGNRSSAVAERVRVAEKAAADAAKAAETPKAKTEVNPLDATAKLNETSPDIISEQMAKGNKNSNANAEGYNVNANTSSNATSASSSSSSSSTTNTTTATSAPPAVSVALNGFKPGYQSVVMANVKTVSTSGNDEASSSSLNAAAATTGGATPATNPSLGDKIVKTTPTSSASSEGSGLTTATAASNYLGQKLKAAQVEGLGAGNELHSDVSDPKKKRYDLTSSESNSGASHTANANASHVTSNSCSSGSAGSTTPATTMSTSTSTPMLTDGSNANMLNAGEVLGCLDGKVKHDFGKHSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -