Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_018904235.1
Location
JAEIFU010000531.1:45443-57054[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.9e-15 7.7e-12 44.9 0.2 3 44 635 676 633 678 0.95

Sequence Information

Coding Sequence
ATGAACACGCTGGGTCCTAAGAAGGATGGCAGTCCCAATGTGGACTTTTTCAACTCGCCCGAGACGCTGCAGGGCTTTGAATCGATACGCGCTTGGCTGCAAAAGAATTGTAAAAAGTATTTACCGCCGCACAGCTCGGAGCCATTTACCAAGGAGTCATTGGCTCAGTTATTGATATCATTTTTACAATATGTGGAGGCCAAGTTGGGCAAAAATTCACCCGAGCCGCCGGCTACCAGAATTCCGATGCGTTGCTTTCTGGATTTCAAAAACGGTGGAGGTCTCTGCATCATCTTCTCCACCATGATCCCTAATATACAGCTTCTGATCGAAATCGAACAGGCTTTGGTGGAGGCCGATTTGTATCGCATACCCTACATTTACATACGCCCCGAGATCGAGAAGAGTTTCGAGGCGCGTTTGCGTGAAATTCTGGACAATCGTCGTGTGGAAATTGTTACCGATGAGGAGGATGCCACGCATATTGTGTATCCCATAGTGGATCCGCATCCGGATGAATATGCTCGTCCCATCTTCAAGCGTGGCGGTCATGTCATGTTGCATTGGTATTACTTTCCCGAATCCTATGACTCTTGGGCCATGAACAATTTCGATTTGCCCGATAATATACCAGAGAATCCGGAATCACCAGCCGAACGTTGGCGTGTGGCAGCCTCTTGGATTTTGGATTTGGAGCAATACAACGAATGGATGGCCGAGGAGGATTACGAGGTGGATGAGCAGGGCAAGAAGAAGACGCATAAGCAGCGCATGTCCATTGATGACATCATGTCGTTTGGCGACGAGAAGAAGAAACCTAGCGTAAGCGGCGGCGGCGGCGGCGGCACCGGCAAACAGAAGCGTCGTCGCTCACCATCGCCCACCACATCGTCGTCGACATCTAAGCCGGGTAAACGTAAGCGTTCGCCTGCGGTTATACACAAGAAATCGCGCAATGATGAAGACGATGAGGATTTGACCAGGGATCTAGACGATCCACCAGCTGAACCCAATGTCCAGGAGGTGCATAAGGCCAATGCTGCTCTACAATCCACAGCCAGTCCGGCACCAGCTGGCAAATCTAGAGGAGATAATGACATGATGCCCATTAAGGGCGGCACCATGACTGATCTGGATGATGAGATGACTGGTGGTAGCGCTGCCGCCCAGGCTATGTCCACTGGAGACGGCGATAACTCACAAACGGGAAAAACTAGCGACAATAGCAACACCCAAGAGTTCTCCTCCTCGGCCAAAGAGGATATGGAGGATAATGTTACCGAGCAGACGCATCATATTATTGTACCCTCGTATTCGGCCTGGTTTGATTACAATTCCATTCATGTCATTGAGAAGCGAGCCATGCCCGAGTTCTTTAATAGCAAGAACAAGTCAAAAACTCCAGAGATTTATATGGCATATAGGAATTTCATGATTGACACCTACAGGCTGAATCCCACCGAGTATTTAACCAGCACCGCCTGTCGGCGCAATTTGGCCGGTGATGTGTGCGCCATTATGCGTGTGCATGCCTTCCTGGAGCAGTGGGGTTTGATTAACTATCAAATTGATGCAGATTTACGTCCCACACCCATGGGACCACCGCCCACTTCGCATTTTCATATACTGTCCGATGCTCCATCCGGCTTGCAGGCCATCAATCCGCAAAAGACACAACAGCCATCGGCGGCCAAGACTCTGCTTGATTTGGACAAAAAACCCTTGGGTAAAGAAGCTGGCGGTTTGGGAGAGCTGGGTGAGAAGACCATCAAAACGGAGGCATTGGAAAATGGTTCAAGCGGCGGTCTGGCTTCTGGTGTCAGTCAGTTTGGCCTGAAGTTGGATCAGTATGCCAAGAAACCGGCAGCCATGAGGAATCGCACTGCGGCCAGCATGTCCCGCGAGTGGACCGACCAGGAGACACTGCTACTGCTCGAAGGACTCGAAATGCACAAGGATGACTGGAATAAAGTGTGTGAGCATGTGGGCACACGCACGCAGGATGAGTGCATTTTGCATTTCTTGCGTCTGCCCATAGAGGATCCCTATCTGGAGGATGATGGTGGCTTCCTAGGACCACTGGGTTGTCAACCCATACCGTTTAGCAAGTCGGGCAATCCCATAATGTCAACAGTGGCGTTTTTGGCCTCGGTGGTGGATCCAAGGGTGGCTGCCGCCGCAGCCAAAGCGGCCATGGAGGAGTTTGCGGCAATTAAGGATGAGGTACCAGCCACCATTATGGACAACCATATGAAGAATGTGGAAAAGGCCTCGGCAGGTGGCAAATTCAATCCCAACTTTGGATTGGCCAACAGTGGCATTGCCGGCACTGGCAATGACAAGGAGGAGGAAGAGTCCAACAAGGAGGGCAACAGCCACAAGGAGAGCAGCGGCACGGATGAGGAACTAAAAGATCTAAGCAAGAAAGACGACGATGCCAAGTCCAAAGACAAAACGAAATCGGATAAGCCCAACACCACCACAACAAACACAGACTCAAGTTCCACCACCACCAATAACACTGATAAGAAATTGCAAAAAGAGTCTACGTCCTCCTCCATCTCGAACAAATCAGAGAAATCAAACAAATCCTTACCCACAGAGCCACCAACAGCCACCGGCAGTGGCCCCAGCGATGTGGACATCAAAACCGAGGATCAAAACAGTGGCGATGGCGAGACCAAGGATGGCGGCGGCAGCAGCAGCAGCGGCGAGCCCAAGGATGCTGCCGCCGTCTCAGCCAAGGAGGGAGCATTTAGTGAGAATAATATGCAAACAGCGGCAGCTGCCGCTTTGGCCTCGGCCGCAGTCAAGGCCAAGCATTTGGCTGCCTTGGAAGAACGAAAAATCAAGTCGCTGGTGGCTCTTCTCGTCGAGACGCAAATGAAGAAGCTGGAAATAAAGTTACGCCACTTTGAGGAGTTGGAGGCCACCATGGAGCGTGAGCGTGAGGGTCTAGAGTATCAGCGTCAACAGCTGATCACCGAGCGGCAGCAATTCCATCTGGAGCAGCTGAAGGCCGCAGAGTTCCCCCCTACCCAGCATCAGCCGCTGCCTCCCCACATAGCCGCTGGACCACCACCCAATGGTGCCTCATTTGCTGCACCACCAATTCTACCCGGTGCACCACCCACCAGTGAGCCCATCGCTGCTCAAGCTACGCAATCTCAGGCTCCCACGCCTATGGATATCACACCGCCGCCAGTCCATGTACCCGCTTCGGACGCTGCTGCTGCCAGTGTGCCGCCCACTGGTCCGCCTGCCTCAAGCATTCCTCCACCTGGTCCTCCTCCATCGTAA
Protein Sequence
MNTLGPKKDGSPNVDFFNSPETLQGFESIRAWLQKNCKKYLPPHSSEPFTKESLAQLLISFLQYVEAKLGKNSPEPPATRIPMRCFLDFKNGGGLCIIFSTMIPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFEARLREILDNRRVEIVTDEEDATHIVYPIVDPHPDEYARPIFKRGGHVMLHWYYFPESYDSWAMNNFDLPDNIPENPESPAERWRVAASWILDLEQYNEWMAEEDYEVDEQGKKKTHKQRMSIDDIMSFGDEKKKPSVSGGGGGGTGKQKRRRSPSPTTSSSTSKPGKRKRSPAVIHKKSRNDEDDEDLTRDLDDPPAEPNVQEVHKANAALQSTASPAPAGKSRGDNDMMPIKGGTMTDLDDEMTGGSAAAQAMSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDAPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKEAGGLGELGEKTIKTEALENGSSGGLASGVSQFGLKLDQYAKKPAAMRNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKFNPNFGLANSGIAGTGNDKEEEESNKEGNSHKESSGTDEELKDLSKKDDDAKSKDKTKSDKPNTTTTNTDSSSTTTNNTDKKLQKESTSSSISNKSEKSNKSLPTEPPTATGSGPSDVDIKTEDQNSGDGETKDGGGSSSSGEPKDAAAVSAKEGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFPPTQHQPLPPHIAAGPPPNGASFAAPPILPGAPPTSEPIAAQATQSQAPTPMDITPPPVHVPASDAAAASVPPTGPPASSIPPPGPPPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00918017; iTF_00915266;
90% Identity
-
80% Identity
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