Lmom002949.1
Basic Information
- Insect
- Lordiphosa mommai
- Gene Symbol
- GATA6
- Assembly
- GCA_018904225.1
- Location
- JAEIFT010000036.1:828192-845829[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 6.8e+03 -3.2 0.1 1 5 312 316 312 324 0.81 2 2 1.4e-17 5.2e-14 51.6 6.9 1 34 362 394 362 396 0.97
Sequence Information
- Coding Sequence
- ATGGTGCGTGAAACGGAGGATCAGCAGCATTACGTGTGTGCACCACGTACCCAACAACGACGCATTCTGACCACAGCGGGCACACTCGAGTTGAACGATACACGTGAGATTGAGCCACATACCAATGCCAGCAGTGCCAGCTCAGGTTCTGCACCCGAGACACACATTGAATACCAGCGGAGTTCACATCAGTCACCAGTTGCCGCCCATTCCACACACTACGTTCAGATGGCTCCACGCAATTCGGAGGTAGCCGAACAAGTGGCGTCCGGCGGTGCTCCTGGCACCCTCTATGCCTATCCCTCTGGCCACATCATATGCAGCAGCGAAGATGTGGCGGCCATTAAGATAGAAACCATTGAAAAAAACGAGCTTAGTTCGCATGCCGGCAGTGTTCGTTTTGTCACCGAAGATGGCCGCTTTGCCACCTCGGCGGGCACAGACGGACCCAGCACCAATATTTACTATGAAACAGCTGTCGTGGATGCCAGCGTACATGCGAATGAGTCCAAGACCTATGCGGATCTGGGCAATGCCTATGCTTCCTTTCCGACCAGCTCGAGTTTTGCCAGCAGCAACAGCTATGCGGCAGCCACCCTGCAGCAGGGCAACACCATTTACAGCATGCCCGGTCACGGCCAGTTTATCACGAAATCGGATCCCAATTTAAATCCCATACGTCAAACGGGCACATATCAAACCGTTACCTTTCTGGAGGGCGGCAATCCCAATGATCCGGCTTTGTGGTCCACCCCTGGACCCGATTACCAGAATGTGCCCTTTACCAACTATCATTCACAGGTCATCGATGACTATGCCCCGAGTAACATGACCACCAGTCATTGGTCGCCAGCCAGCACAATTGGTCAGTACGATGCCAGTCTGGTGGCCGCCAGCGCTTTACCCTCCACCCACGCACTCAGCGAGCTCAAGTGTGACAATTGCCAATCGCCGTATGTGCGCAAGGGTTCGGATCTCTTCTGCCCCAGCTGCCCCTATGCACGAATTCCCACTCGTGTACCGCCGCGACAGGCCAAACCCAAAGCGGCCGCCGCACCCAACAATCGACGCAACGGGGTGACCTGTGCCAACTGCCAGACCAATTCCACAACACTCTGGCGGCGCAACAACGAAGGCAATCCGGTGTGCAATGCCTGTGGACTGTACTTCAAGTTGCACAATATGAACCGCCCGCTATCCATGAAGAAGGAGGGCATACAGAAGCGTAAACGTAAACCAAAGAATAATGGTGGCGCACCAATGCATCGAGCTCCGTTGCCAAGCATGAACCAGGGAGTTAACTTAATGGTCAACAGTGGCACTCTTTATCCCTCACAAGTGCCAGTTAGCATGTTGAATAATCAACAAAATGCCAGTCCTGAGCTGCATGATATGTCCACGACGGGACCGGCTGGTGGGGGTTCGCGTGTGGTGTCCATTCCATTGAATGCCTCCGCGCCGCCCACATCGGATGGCACCTTGAATATGTCGCGTCATCATGTGACAGGTGAGAGTCATTCGCCCTATAGTCAGCAGCAACCGCCAGCACAGAGTCAATCGCCGCATCTAAATCGTCAGATTGTCCAACCGGTTAATCCTCCCATCGAAAGTGGTCGCACTTCCAATAGCGAACTCACACCCAGCGTAATAACGCGCACTGGTTTACCGGAGCGTTCATCGAATAATTAA
- Protein Sequence
- MVRETEDQQHYVCAPRTQQRRILTTAGTLELNDTREIEPHTNASSASSGSAPETHIEYQRSSHQSPVAAHSTHYVQMAPRNSEVAEQVASGGAPGTLYAYPSGHIICSSEDVAAIKIETIEKNELSSHAGSVRFVTEDGRFATSAGTDGPSTNIYYETAVVDASVHANESKTYADLGNAYASFPTSSSFASSNSYAAATLQQGNTIYSMPGHGQFITKSDPNLNPIRQTGTYQTVTFLEGGNPNDPALWSTPGPDYQNVPFTNYHSQVIDDYAPSNMTTSHWSPASTIGQYDASLVAASALPSTHALSELKCDNCQSPYVRKGSDLFCPSCPYARIPTRVPPRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRAPLPSMNQGVNLMVNSGTLYPSQVPVSMLNNQQNASPELHDMSTTGPAGGGSRVVSIPLNASAPPTSDGTLNMSRHHVTGESHSPYSQQQPPAQSQSPHLNRQIVQPVNPPIESGRTSNSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00920327;
- 90% Identity
- -
- 80% Identity
- -