Basic Information

Insect: Lordiphosa mommai
Gene Symbol: kipf
Assembly: GCA_018904225.1
Location: JAEIFT010000155.1:53316-70361[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.2e-06 0.00024 21.4 1.8 1 23 154 176 154 177 0.95

2 17 8.3e-06 0.00047 20.5 2.3 1 23 183 205 183 205 0.99

3 17 1.5e-05 0.00084 19.7 0.1 1 23 211 233 211 233 0.99

4 17 0.00014 0.0078 16.7 3.8 1 23 348 370 348 370 0.97

5 17 0.00012 0.0069 16.8 0.1 1 23 375 399 375 399 0.98

6 17 7.7e-06 0.00043 20.6 3.7 1 23 405 427 405 427 0.99

7 17 8.4e-08 4.8e-06 26.8 2.6 1 23 433 456 433 456 0.98

8 17 1.6e-06 9e-05 22.8 2.4 2 23 523 544 523 544 0.97

9 17 3.8e-07 2.1e-05 24.7 5.5 1 23 547 569 547 570 0.96

10 17 0.0028 0.16 12.5 0.2 1 23 595 618 595 618 0.97

11 17 0.017 0.96 10.1 8.1 1 23 668 690 668 690 0.96

12 17 0.0077 0.44 11.1 5.6 1 23 694 716 694 716 0.99

13 17 1.2e-06 7.1e-05 23.1 3.9 2 23 722 743 721 743 0.97

14 17 0.0067 0.38 11.3 2.6 1 23 776 799 776 799 0.96

15 17 6.8e-07 3.8e-05 23.9 0.2 3 23 893 913 892 913 0.98

16 17 3.4e-06 0.00019 21.7 2.5 1 23 919 941 919 941 0.98

17 17 0.0007 0.04 14.4 3.0 1 23 946 969 946 969 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.2e-06	0.00024	21.4	1.8	1	23	154	176	154	177	0.95
2	17	8.3e-06	0.00047	20.5	2.3	1	23	183	205	183	205	0.99
3	17	1.5e-05	0.00084	19.7	0.1	1	23	211	233	211	233	0.99
4	17	0.00014	0.0078	16.7	3.8	1	23	348	370	348	370	0.97
5	17	0.00012	0.0069	16.8	0.1	1	23	375	399	375	399	0.98
6	17	7.7e-06	0.00043	20.6	3.7	1	23	405	427	405	427	0.99
7	17	8.4e-08	4.8e-06	26.8	2.6	1	23	433	456	433	456	0.98
8	17	1.6e-06	9e-05	22.8	2.4	2	23	523	544	523	544	0.97
9	17	3.8e-07	2.1e-05	24.7	5.5	1	23	547	569	547	570	0.96
10	17	0.0028	0.16	12.5	0.2	1	23	595	618	595	618	0.97
11	17	0.017	0.96	10.1	8.1	1	23	668	690	668	690	0.96
12	17	0.0077	0.44	11.1	5.6	1	23	694	716	694	716	0.99
13	17	1.2e-06	7.1e-05	23.1	3.9	2	23	722	743	721	743	0.97
14	17	0.0067	0.38	11.3	2.6	1	23	776	799	776	799	0.96
15	17	6.8e-07	3.8e-05	23.9	0.2	3	23	893	913	892	913	0.98
16	17	3.4e-06	0.00019	21.7	2.5	1	23	919	941	919	941	0.98
17	17	0.0007	0.04	14.4	3.0	1	23	946	969	946	969	0.95

Sequence Information

Coding Sequence: ATGGAGAACATTTGCCGGGTTTGTATGGACGGCTCTGTTACTCTAGTGGAAATATTTACTGACGAGGGGGAGGAGGAGGGGGAGCTCGACCCGGAGAAGAATCTGGCCTATGTGCTCAACCAGTGTGCCAACTGTCAAGTGACACGAGAGGATTTACTGCCGCAGCAGATATGTTTATCCTGCGTATTGGCCGCTCAGAATGCATTTCGATTTAAACAGAAATGCGAAGAGAGCTATCAACATTTTTGCCAGCTAATCGAGCTGGGCAGGCGACAGGAGCGAAATAATATGGAGGATGGTATGCAGTTGGTGGATATGACATGCATCAAAATCGAACCAGGCTTAGAGCCGGAACCGCAGGAGGAGATAATCCCATCTCAATTTGTCAAAACGGAGGACTTATCGATGCCACCAACTGACGAGCAGTCTGATCTGTCTAGACCCAATGAAAATTCACCTCATCCCTGTGAGATGTGTGGCAAAGCTTTCCGTGGCCGTTTCGAGCTTAACAATCACATTCGCATACATCATACGGGCGAACGTCCGTTCAAGTGTCCTCATTGTCCTAAGACCTTTTCGGTGCGTCTATATATGAGGAATCACATACGCATCCATACCGGGGAACGACCATATAAGTGTCCACTATGCCCGAATGCGTTTACCTTGCCGAATACACTGAAGGCACACATACGAAGGCATGCGGGTGCCGGAAATCGTTTGCTTTCGCGCAAACTGTTTCATTGCGATTGCTGCTCGGCGGCTTTTCGGGAACATTATCGTTTGCGGCAGCACAAGCAATTGAAGCATCGCATCGGCGAGACAGTGGCCAAAGAACAAGGCAAACTCCCACAAAGATCGTCTCAACACCCACCGGAACGTGAATTACCAATTAGACCAGCTGCAGGCATTCACCGGCAAATCGTGTCCGAGGAGAGTCATTTTGAAGTCAAGAAAGAGCCAAACGAAGAGGATACGTTCCCAGATGAGTTTCTATCCAAAACTGAGGATCCCACCAATACCACTCAATCTCCGGATAAGAATTTCTGCTGTACGACTTGTGGCAAGCGATTTCAATACAGATACGCTCTAAGCAATCACATACGCTGGCATATGGTACGACCCTTTCCGTGTCCTAAAGCCGAATGCCCGCAAGCATTTCGAACGGATGCCAAACTTAAGATGCATCTGCGTACTCACGCCGCGGATTGGCCCTTCAAGTGCAGCGAATGTCCAAAGGGTTTTTATAGTAACTGTAAGCTTAACGAACACATGCGGACTCACACTGGCGAACGACCGTACAAATGTCCGCATTGCCCACATGCTTTTACCCAGAAAAATAATTTAAATCGACACATTCGAATTGCACATATGCAGACAAACCAAGGCATAAATGAGGAGATACCGAGGACCCAGCCAAATAGAATACATAACCAAATGACACAGGATATCATTCCAAGTCAACAACGAGTCAATAAAGAGATTAAAATGGAAAATCAGGATCGTTCTTACTACATGCCAGATGAAGAAGAAATTCTACCTAGTAATGATCCCAATCAAGCTGCTGGCAGTTGTCACTTATGCGGAAAAAGTTTTGCTAACCGTTTCAGCCTAACCAGACATATACGCGGACACACCGGCTTTCAGTGCCCTCACTGTCCCAAGGCGTATACCCAGAGCCATAATCTAAAGACCCACATTCGGATACACCACAGCCTGGCAGAAGGTTCTGAAAACTCTGACTATTCCGACACCAAGAAGACTCCAGCCCATCCCCTTCAAAGTTTTCGCTGCAGATGGTGTCCAATTGCATTCCGAGATCAGGTTAAGGCGCAGTTACACATGCAAGTGAAGCACAAAAACCGTATGGCTAAAAATAGTATGGATGGACCGCCAGCTGAAGAATTGATTGTTGGAATCGACCCACTCCCCTTAAAGGCAGCAAAAAAGGACACAGACTGGGTGCCCACAAAGCCGAGAACGCAACAGCAATCCCAGAAGACTCATGTGTGTGGATCATGCTGTAAAACGTTTCAGCGGAGACATGACCTCACCCGACATATTCGCACACATCAGCGACCCTACAAGTGTGCCCACTGTCCCAAATTGTTTCAATTGCATAGCAAACTCAAATTGCACTTACGTCGTCACACTGGCGAACGATTGAAATGTCCACTTTGTTCTTGCACCTACACGCGAAGTGATAATTTGCGTAAGCATATGCGCACGCATAAAAATCAAGGGGACCTACGCAGTGCAGTGCCGGAAGTTGCTGGAACCTCGGCGGCTGATAGTGAGGTAAGCGACCACACGGGAAATGTGGATCCCTATAACTGTGATTTGTGTACCGAGACTTTTCAATATAAATACTACCTGCGGCTACATAAACTCATGAAGCACGGCATCAACGAGGAGGAAGATGAGGAGATGGTCGAGGAGCCTTTGGGAGTACCCCCCATGCAGCTAGGCGAAGCCGAACAACAACAAAGCTTAAGATTTAGAGAAATACGAAATAGACCTGGAGCTGGAGCCTATGAAGAGCTGGAATGCGAAGATATGGACATGGATTGGCGTCGCTTGAACAAAAAACCGAAATTCAGTTTTAATCAAAATCCAATGATTGAGCAGCTGCCGCCACCATTCATGCCTGAGGTTCAGACTATGCTTAAAACCAATATCTGCCCGTTTTGTGGAAAGAGCTATGTGCGCAGGGCGAGCCTAAATGTTCATATGCGCTCTCACACTGGCGAACGTCCATACCAGTGTCGATACTGTGAGCGACGCTTTAACTCAAATGATACATTACGAAGACACCTGCGTGGACATACGGGCGAGCTTTACCGTTGCAATATGTGTCCAAAGACTTACACAGATCGCAGTACATTGCGTTTTCACAAGAAGGTGAAGCACGGCATTAGGGAGGAGCATGCTGCATTCTCGAAACGTTTAGTAGTACTTTTGCATCGCATTAAATGGCCACCAATCATAAAACAGGAAGCGCTGAGCGCCTAA
Protein Sequence: MENICRVCMDGSVTLVEIFTDEGEEEGELDPEKNLAYVLNQCANCQVTREDLLPQQICLSCVLAAQNAFRFKQKCEESYQHFCQLIELGRRQERNNMEDGMQLVDMTCIKIEPGLEPEPQEEIIPSQFVKTEDLSMPPTDEQSDLSRPNENSPHPCEMCGKAFRGRFELNNHIRIHHTGERPFKCPHCPKTFSVRLYMRNHIRIHTGERPYKCPLCPNAFTLPNTLKAHIRRHAGAGNRLLSRKLFHCDCCSAAFREHYRLRQHKQLKHRIGETVAKEQGKLPQRSSQHPPERELPIRPAAGIHRQIVSEESHFEVKKEPNEEDTFPDEFLSKTEDPTNTTQSPDKNFCCTTCGKRFQYRYALSNHIRWHMVRPFPCPKAECPQAFRTDAKLKMHLRTHAADWPFKCSECPKGFYSNCKLNEHMRTHTGERPYKCPHCPHAFTQKNNLNRHIRIAHMQTNQGINEEIPRTQPNRIHNQMTQDIIPSQQRVNKEIKMENQDRSYYMPDEEEILPSNDPNQAAGSCHLCGKSFANRFSLTRHIRGHTGFQCPHCPKAYTQSHNLKTHIRIHHSLAEGSENSDYSDTKKTPAHPLQSFRCRWCPIAFRDQVKAQLHMQVKHKNRMAKNSMDGPPAEELIVGIDPLPLKAAKKDTDWVPTKPRTQQQSQKTHVCGSCCKTFQRRHDLTRHIRTHQRPYKCAHCPKLFQLHSKLKLHLRRHTGERLKCPLCSCTYTRSDNLRKHMRTHKNQGDLRSAVPEVAGTSAADSEVSDHTGNVDPYNCDLCTETFQYKYYLRLHKLMKHGINEEEDEEMVEEPLGVPPMQLGEAEQQQSLRFREIRNRPGAGAYEELECEDMDMDWRRLNKKPKFSFNQNPMIEQLPPPFMPEVQTMLKTNICPFCGKSYVRRASLNVHMRSHTGERPYQCRYCERRFNSNDTLRRHLRGHTGELYRCNMCPKTYTDRSTLRFHKKVKHGIREEHAAFSKRLVVLLHRIKWPPIIKQEALSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00919971;
90% Identity: -
80% Identity: -