Lmag005762.1
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- rnf213a
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010001084.1:8652-8999[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.017 1.3e+02 3.2 0.2 42 48 56 62 52 64 0.79 2 2 3e-08 0.00022 21.6 0.6 20 49 74 103 70 104 0.94
Sequence Information
- Coding Sequence
- ATGGGATCCACTAGCTCGTCTTTGAGGGAGGTCAACCCGGCAGCGGCATTGCCAGAAAAAGAACGTTTTGTACATCGTAGGGCAGCAAGCGACATGGCTCCGGTGGCAATCATTGACTTAACCGAAGACGATGTGAAGGACTTTCCTCTCTTTCCAGAAGCTGCATACGAATGTCCCGTTTGCCTAACCAGTCCGCGTCATAGAGATCCAATAGCTCTGCCTTGCGGACATATTTATTGCTATGATTGTACTTACTCCTTGGAGGAAGAGGAAGAGACAGGCTCCAAGGAGTGCCCGCTCTGTCGTTCTACATTTGTAATGGACGATCTGcattatatttatttgtaa
- Protein Sequence
- MGSTSSSLREVNPAAALPEKERFVHRRAASDMAPVAIIDLTEDDVKDFPLFPEAAYECPVCLTSPRHRDPIALPCGHIYCYDCTYSLEEEEETGSKECPLCRSTFVMDDLHYIYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -