Lmag011754.1
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- pnr
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010001924.1:183775-185461[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-18 2e-14 53.6 3.2 1 34 125 157 125 159 0.97 2 2 4.1e-19 1.7e-15 57.0 6.7 1 35 182 215 182 216 0.98
Sequence Information
- Coding Sequence
- ATGTATCATTCAAGTGCCGTGGCAGCCGCCGCTTATACAGATCTTGCGGCAGCGGGCAGTGCAGCCGGCGCTGGTGTGGGAGTCGGTGTGGGTGTCTCGGGCTATCATCATCAACAGGCCGTAAATGCACCGGTCTATGTGCCCTCCAATCGTCAGTATAACCATGTGGCCGCGCATTTTGGTAGTGCCGCGCAGAATGCCTGGACTACGGATAGCTTTGGGTCGGCACATGCCCAACTGCCGGCGCAGTTTTATACACAAAATGCGGCCGTTATGATGGGCTCTTGGCGCAGTGCCTACGATCCGACGGGATTTCAACGCTCCTCGCCCTACGAGAGCGCCATGGACTTTCAGTTTGGTGAGGGACGCGAATGCGTCAATTGTGGTGCCATTTCCACTCCGCTCTGGAGACGCGATGGCACCGGACACTATCTGTGCAATGCCTGCGGTCTGTATCACAAGATGAATGGAATGAATCGGCCGCTGATTAAGCCCAGCAAGCGCCTGGTGAGTGCAACAGCCACACGACGCCTGGGCTTGATGTGTACCAATTGCGGTACACGCACCACCACACTCTGGAGGCGGAATAATGATGGTGAACCCGTGTGCAATGCCTGTGGTTTGTACTACAAACTGCATGGAGTGAATCGTCCGCTGGCCATGCGCAAGGATGGCATACAGACCAGAAAACGCAAGCCCAAGAAAACGGGCAGTGGTGGCGGTGGGGGAGCAACCGTGGGTAGCAGTTCGAGTGCAGCTCTTGAGACCATTAAGGAGTGCAAGGAGGAGCATGATCTCAAGCCCTCGCTTAGTCATGGTCTTAGCAAGCTGCACACAGATCTTAAGAGTAGCCTGGCCAGCAGCTCAATGGCCAGCAGTTTGCTTACACATCAGCATCATGTCCAGCaacaccagcagcaacagcagcagcaacagcaagcgCATCAGCAATGCTTTCCTCACTACGCCCAGACGCAGGCAcagcaccaacagcagcagcagcaacagcaacaggcaTCACACCAGCAACATGCTCATGGCCTGACCAGCAGCAGTGGCGGAACTGGTCATCAGTCACAGCATAGTTCCAGGCAATTGCATGGAAACAGTGGCTCTCAGTTGTACACTCCCAGTAGCAGTTCAGCCGCCTCCGCTTATACGACGCACAGCAGCAATACAACAGCCGCTGCAGACACGCCCACTTTAAGCAATGGCACACCCTCGCCCCActatcagcatcatcatcatcatcatttgcacgcagcggctgctgctgccgcttcgGGAAGTTCGCATGGCCATCACAGTGTgggggttcatcatcatctgcatgcagcagccgcagcagcagcctaCGGTGTAAAGACAGAGACAAATGCCACCAACTATGACTATGTGAACAATTGCTATTTTGGTGCCTCATTTGGGGCATTGGGTggtgctgctgccgccgcctcGTCGGCTGCCATGGCAAGTGGAGCCGCCAGCGAATTGGCTGGCTATCATCATCAGCATAATGTCATACAAGCAGCCAAATTGATGGCCACTTCTTAG
- Protein Sequence
- MYHSSAVAAAAYTDLAAAGSAAGAGVGVGVGVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAQNAWTTDSFGSAHAQLPAQFYTQNAAVMMGSWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLMCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGGGGGATVGSSSSAALETIKECKEEHDLKPSLSHGLSKLHTDLKSSLASSSMASSLLTHQHHVQQHQQQQQQQQQAHQQCFPHYAQTQAQHQQQQQQQQQASHQQHAHGLTSSSGGTGHQSQHSSRQLHGNSGSQLYTPSSSSAASAYTTHSSNTTAAADTPTLSNGTPSPHYQHHHHHHLHAAAAAAASGSSHGHHSVGVHHHLHAAAAAAAYGVKTETNATNYDYVNNCYFGASFGALGGAAAAASSAAMASGAASELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00914974;
- 90% Identity
- iTF_00914974;
- 80% Identity
- -