Basic Information

Insect: Lordiphosa magnipectinata
Gene Symbol: -
Assembly: GCA_018904285.1
Location: JBAMBO010004242.1:101832-106307[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.012 0.94 10.7 0.5 1 23 129 151 129 151 0.97

2 14 5.6e-05 0.0042 18.1 2.5 1 23 334 356 334 356 0.98

3 14 0.94 71 4.8 2.8 1 23 362 385 362 386 0.92

4 14 1.2 91 4.5 0.6 1 23 401 424 401 424 0.94

5 14 0.0056 0.42 11.8 2.1 5 23 677 695 674 695 0.92

6 14 0.064 4.8 8.5 1.4 1 23 701 724 701 724 0.98

7 14 1.1 83 4.6 2.1 2 23 761 782 760 783 0.93

8 14 0.0056 0.42 11.8 0.8 1 23 804 827 804 827 0.97

9 14 0.0027 0.2 12.8 0.3 1 23 1014 1037 1014 1037 0.90

10 14 0.0093 0.69 11.1 4.5 1 23 1049 1071 1049 1071 0.98

11 14 0.001 0.078 14.1 0.8 1 23 1076 1099 1076 1099 0.95

12 14 0.013 0.95 10.7 5.2 1 23 1105 1130 1105 1130 0.95

13 14 0.00019 0.015 16.4 1.0 1 23 1135 1157 1135 1157 0.96

14 14 0.026 1.9 9.8 3.1 1 23 1163 1186 1163 1187 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.012	0.94	10.7	0.5	1	23	129	151	129	151	0.97
2	14	5.6e-05	0.0042	18.1	2.5	1	23	334	356	334	356	0.98
3	14	0.94	71	4.8	2.8	1	23	362	385	362	386	0.92
4	14	1.2	91	4.5	0.6	1	23	401	424	401	424	0.94
5	14	0.0056	0.42	11.8	2.1	5	23	677	695	674	695	0.92
6	14	0.064	4.8	8.5	1.4	1	23	701	724	701	724	0.98
7	14	1.1	83	4.6	2.1	2	23	761	782	760	783	0.93
8	14	0.0056	0.42	11.8	0.8	1	23	804	827	804	827	0.97
9	14	0.0027	0.2	12.8	0.3	1	23	1014	1037	1014	1037	0.90
10	14	0.0093	0.69	11.1	4.5	1	23	1049	1071	1049	1071	0.98
11	14	0.001	0.078	14.1	0.8	1	23	1076	1099	1076	1099	0.95
12	14	0.013	0.95	10.7	5.2	1	23	1105	1130	1105	1130	0.95
13	14	0.00019	0.015	16.4	1.0	1	23	1135	1157	1135	1157	0.96
14	14	0.026	1.9	9.8	3.1	1	23	1163	1186	1163	1187	0.93

Sequence Information

Coding Sequence: ATGGCCGAAAAGCAGCACCCTCAGCGTCTGCAGTCGTCTCACAATTCCAAATTTGTTTGTCGCTGCTGTCTGAGATCGGAGGCGGAATTCCTTAGACTGGATACTCAAATGGTGGCTCGCAATCTGGATGCGAGTAGTACCAGTGGAACATTGGATCAAATACCTCTCTTAAGTTGCTTGCTCTTCTGCATACGCACGGAAAGAAACCTGGAGCTGTCGCCATACATTTGCAAGGAGTGCAGCCAGAGCTTACAAATTGCGTACTATTTTCTACAAAACGCTCTCCGTGCCCATGAGATTCTGTGTCGCCAACTGGCTAAAGGCAAGGCGGCAACATTGTCGCGTGCGAATGGACACATTCAGCAGGGGtcACAGCCCGTTCGACATGAATGCAAAATATGTGGTGATATTATTAACAATCGAATGGAGCTGAAGCAGCATATACGACTTCACACAGATGCCATCGCTCATAATTGCACGTTGTGCAAGTTTGTCACGCTCAAGCAGCGGCAAATGTTGGAACATTATCGCGTCACCCATGCCCTGACGGCGGCCCAGGCAGAGGAGCTGTTAAAAGACGCCAGCAACAAGCCGTCGCCTGTTAAGGCGGAGGAGGAGGTAAAAGTGTGCACGTTGGAGGACATGGAACTGCTGATACCCACTGTACTCACACCCGAAGACTATGCCCAGCCGAAAATGGAGGCCGATCAGTTGCGTGAAATTGAACAACAATTGGCTGTGACCATGGCCGGCACGGAAAACCAGAATGTGAGCATAGGTACTGAATATCTGGTGCTGCCGGATGGCTCACTGCAACAGCTGGGTGATGGCGGTGTGGTCATTGAGTATATTGATGATAGCAAACCCTCCAACAATATAAGTCTACAGAATTTGCTTGCTGGCGATCCCATGGAGCCCATGGACTTGGATATTAATGAGCTCATAGAGGAGGAAGTTATGTCACCGATCAAAGTCAAACCAAAGGCTCCCTTGTTGAAGCACAAATGCAAACTGTGCCCCAAGACCTTTGCCACTTTGGCCCGTTTGAAATCTCATCAATTGACCCACAGCCATCTACCCAAATTCTATTGCGATCAATGTGGCTTTTATTCGTTGCGTAGCTCTGATCTCGCCCAGCATTATAAAAACACGCATCACAAGTCGGTGGATGAAACTTTGCCTGGTGACGAGGCGCGTCCATTTTCCTGCGATTTGTGTCTGTTTGAGACACAAAGTTCGGGCTCATTGCGCGTTCATTACAATGAAAAGCATCAGATTCAGCCCAGCGACATACATTTGCGTCCCAGTTGGTCGAGTGAGCTGACAAATAAGGTTAAAACGTCCACGGAGCCAACCGAAATGCAATTGGGTATTAGGTATCCAACCATTTCAGCTTCAGCTACAATGACAATGGCTGATCATAATcaacagcagccgcagcagcagcagccgcctccTCAGGCCACCACAACAGCTACGATTACACCAAGTGGTGACATAAGCGTGGTGGTAGATGCCACTGCCTTGTTCTATGCAGCTGCTGCAGAGAACACCAGTAACAATCCCTCCCAAACTTCCACAATCGCCACACACGTAATGGATACCAGTGACCCCAGCAACACATTTGCCATTTTTCCCGAAATCTCAGTGGCAGAGCCCATCCCAACTACTACCACCGTAACGCCCAACACCACCATGTTTGGCGATATGCAGGACTTTATAGACAGCACCGATGTGGCTGCCATATGTACCATACCCGCCGATGATATGCCCGTGGTGGATGGCGATGATATTGTCATTGATAATAACAACATAAGTCTGGATTTTGATGCTGAAAATCTGTTTGAGGAATTCGACGAGGAGGACGAGGCGGCGGATGATGATGAGGACGACGATGCCGAGAATGAGGATGAGAATGACAACAATGATACGGCTGCAGATCAGAATCTTTTGTTAACCAGTGATGATGACGATGTGGATGACTTTGATGATGAGCAATCGAAGCATTTGCAGAAACCATATTGTATCTTTTGTAATAAGAAGTTTACGAGTCAATACAAGTTTGAGAATCATATGTTTGTGCATCGAGGTCTGGCACCCTATAGGTGTGAGCTGTGCACCAATCTGTATAACATGAAGCGTCTACTAATCAGGCACTACAAGACGGTACATAAACGCATGCCCACTCGTGATATGGTACAGGCCAAGGGCGATAAAGTTTCAGTGGAACGCACAAATATTGAGAAGCTGCAACTTAATGCGATTAACAATCCCATGCTTATGTGCTCCAAGTGTCCGTTTGAGTGTGAATCGGATGCGGAAATGCGTAAGCATTTAAATGCGCATCATGGCATTAATGATGGTGTATCCGTGCACGCCAACGAGGTGTTTATCATACGCAAATTACCTTTTGAATGTCCGCGTTGCATTCGTTCGTTTGCTGCCAAGCGTACGTTGACGCGTCATCTGCAGCGTAGCCATCTGGTTGATACCATTATTGAGATGCAGGCACCAGTACAACAAACGACAACCAGCTCGGCAGagaccaccaccaccagcacgGCTACCACAACTCTGCCTGTGAATAGCAATGAGATAATGTCTGCATCATCTGGTGATAGTGGCGAAAGCGTAGCCGCCGTCAAACCAGAACCGGACAACGGGGATGTGGATGTGGGTATTGAAAACATACCGACGCCACCAGCACCAACCCCAACGGCATCCACTTCTACAGCGGCGGCCACCGCTTCACCCACAGTAATAGCCGCCACATCATCATCCTCAACACTTTTTCCCACACCCACGCCCTTTGATTTTGACTATGATTTTATGGGCGATGCTGCCACCACAaccacacccacacccacacccattggcagcaacaacaataataccAACACCACCGATGGCTATGCAGGCGCCACTGACTCTGCACTGCCCAGTCATCTGCTAAATGGTAGCGACAAACTGTTGACTACCGCCACCATGGATCCCTCGCCCGTGAAGGATTTACGCTCGCGCCTGCCCCGGACTCCTATCTATGTCTGCAAACTttgcaacaaaacttttgacgAGCTGGGGAAACTGGTCAAGCATGAAACGGAGGTGCATTCTAGTAGCGAATCGAATCGTTTTAGTGAGGAGCACAAGTGTTCGATCTGCAATACAACATGTCGCACCCCGGCATTGCTTGAGTTCCATATGAAGCGACATTTGGCGCGCAAATTTCAATGCAAAGTGTGTCCCAAGGCCTTTTTAAAAAGCACGGAACTGGAGCGGCACACCAAGGCCAAGCATAACAATGTACAGGCTTTCAAATGCTCCCTGGATGGTTGTCGCAAGACATTCAATTTTAAACATCATATGGTAAGGCATCAGAATGCCTCCCATCTGAAGGTGCGTCATGTGTGTACGATATGTGATAAGGAGTTGAAATCCAGTTCACGTCTAAGGAATCACATGGGCATACATCGCGGGCCTACAGCCTACAAGTGTCCCAAATGTGAACGCAATTACATGCAACGCGGATCAATGCGTCACCATGCCTTGCAAATACATCACATCCAATTAAGTGATGCTGAACTGGATGCAATTTTCCACACGAAGGTTCTGACACGAAAGGGCGTCACTGAGAAGGAACAACGCTCCGAGTTAACCGAAGCCgttgttaatattttattaaaatag
Protein Sequence: MAEKQHPQRLQSSHNSKFVCRCCLRSEAEFLRLDTQMVARNLDASSTSGTLDQIPLLSCLLFCIRTERNLELSPYICKECSQSLQIAYYFLQNALRAHEILCRQLAKGKAATLSRANGHIQQGSQPVRHECKICGDIINNRMELKQHIRLHTDAIAHNCTLCKFVTLKQRQMLEHYRVTHALTAAQAEELLKDASNKPSPVKAEEEVKVCTLEDMELLIPTVLTPEDYAQPKMEADQLREIEQQLAVTMAGTENQNVSIGTEYLVLPDGSLQQLGDGGVVIEYIDDSKPSNNISLQNLLAGDPMEPMDLDINELIEEEVMSPIKVKPKAPLLKHKCKLCPKTFATLARLKSHQLTHSHLPKFYCDQCGFYSLRSSDLAQHYKNTHHKSVDETLPGDEARPFSCDLCLFETQSSGSLRVHYNEKHQIQPSDIHLRPSWSSELTNKVKTSTEPTEMQLGIRYPTISASATMTMADHNQQQPQQQQPPPQATTTATITPSGDISVVVDATALFYAAAAENTSNNPSQTSTIATHVMDTSDPSNTFAIFPEISVAEPIPTTTTVTPNTTMFGDMQDFIDSTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEEFDEEDEAADDDEDDDAENEDENDNNDTAADQNLLLTSDDDDVDDFDDEQSKHLQKPYCIFCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVERTNIEKLQLNAINNPMLMCSKCPFECESDAEMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQAPVQQTTTSSAETTTTSTATTTLPVNSNEIMSASSGDSGESVAAVKPEPDNGDVDVGIENIPTPPAPTPTASTSTAAATASPTVIAATSSSSTLFPTPTPFDFDYDFMGDAATTTTPTPTPIGSNNNNTNTTDGYAGATDSALPSHLLNGSDKLLTTATMDPSPVKDLRSRLPRTPIYVCKLCNKTFDELGKLVKHETEVHSSSESNRFSEEHKCSICNTTCRTPALLEFHMKRHLARKFQCKVCPKAFLKSTELERHTKAKHNNVQAFKCSLDGCRKTFNFKHHMVRHQNASHLKVRHVCTICDKELKSSSRLRNHMGIHRGPTAYKCPKCERNYMQRGSMRHHALQIHHIQLSDAELDAIFHTKVLTRKGVTEKEQRSELTEAVVNILLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00920196;
90% Identity: -
80% Identity: -