Basic Information

Insect: Lordiphosa magnipectinata
Gene Symbol: salm
Assembly: GCA_018904285.1
Location: JBAMBO010004420.1:190931-214028[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 6.8e-06 0.00051 21.0 0.9 1 23 472 494 472 494 0.98

2 7 1.3e-05 0.001 20.1 2.1 1 23 500 522 500 522 0.98

3 7 0.023 1.7 9.9 1.5 2 23 865 886 864 886 0.98

4 7 9.6e-08 7.2e-06 26.8 0.5 1 23 892 914 892 914 0.98

5 7 0.00029 0.022 15.9 2.3 1 23 924 946 924 946 0.98

6 7 0.039 2.9 9.2 2.9 2 23 1332 1353 1331 1353 0.97

7 7 3.8e-08 2.8e-06 28.1 1.3 1 23 1359 1381 1359 1381 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	6.8e-06	0.00051	21.0	0.9	1	23	472	494	472	494	0.98
2	7	1.3e-05	0.001	20.1	2.1	1	23	500	522	500	522	0.98
3	7	0.023	1.7	9.9	1.5	2	23	865	886	864	886	0.98
4	7	9.6e-08	7.2e-06	26.8	0.5	1	23	892	914	892	914	0.98
5	7	0.00029	0.022	15.9	2.3	1	23	924	946	924	946	0.98
6	7	0.039	2.9	9.2	2.9	2	23	1332	1353	1331	1353	0.97
7	7	3.8e-08	2.8e-06	28.1	1.3	1	23	1359	1381	1359	1381	0.99

Sequence Information

Coding Sequence: ATGAAAAATCACTTGTCCAACAACGTTCTGTGTGCGATGCGTAGTGACTTCAAAGATAATCACCAGGAGACCATCAATAAAATGATACAATTTGGTACAGTGAAATATGGCATTGTCAAACAGCTAAAGGATCGCGCTAGAAGCGCCGATAAAGACACAGCCAGCGATCAGGAGGAGAACGGCGCTTGCTCGCCTCTAACCACAGCCACGGCCAGTGCCAGTCCCAGCCGTAGTAGTCCACAGCGTCACAGCGAGGACGAAGAGCCACATCATGAAGATTTGGATGTGTCATCCAATGCCGAAGTGAGTAGTAAAGACGAAGAGCAAACAGAAACTGAAAATCAGGAAGATCAGGCCGATGAGGCTATAGAGgataacaataacaaagtgTTGGTCATGACAAAGCCATCACCGCTTAACTCCTCCAAAACCTCGGAACAGGCTGCCATGCCGAGTTCTCCCCTGACGACAGGCCAAGCCGAAGAGGCAGTAGTCAACGAAAAGGAAATGGAAGTGGATGTAGAAATGACTgaacaggagcagcagcagcagcaggaggaagAGGCGCCAGCACAGCCCACGCCGCCTACGCCTAATCAAGCAATGGCTGCGGCTACACCTGGTGCGGCACCCGTCACCCTGGAGGCCATACAGAACATGCAAATGGCCATAGCCCAGTTCGCGGCTAAGACTATAGCAAACGGTGCCACGGGAGCGGATAATGAGGCGGCCATGAAGCAGTTGGCCTTTTTGCAGCAGACGCTATTCAAtttgcaacagcagcagctcttCCAAATCCAATTGATACAACAACTGCAATCCCAGCTGGCCCTGAATCAGGCGGCCAAGCAGAgcgaggaggaggaagaatttgAGGTTGAAGAAGAGCGTGAGGATGGTGGAACGGACACCTATGAGGAGGAGGAGCGCATAGCGGACATGGAGCTACGTCAAAAGGCCGAGGCACGCATGGCCGAGGCCAAGGCACGTCAACATTTAATCAATGCGGGAGTACCTCTCCGGGAGGCGTCGCCCGCAGAGTCTTTGAAGCGTAGACGTgaagaggaagaggaggaggaggactcGAGCCGTCAGCCCAGTCGCCGTATAAGTATAGAAGCAGGTGGTAGTACCAGCGCTTCTAGGCTTAGAGATACCTCAGCCCAGGATGCTTTGGCCAAACTGAAGGAAATGGAGAATATGCCCCTGCCCTTTGGCACCGACTTGGCCTCGAGTATTATAACCAATCACGATGATCTGCCCGAGCCAAATTCCTTAGACCTGCTGCAGAAACGTGCCCAGGAGGTACTTGACTCGGCCTCTCAAGGTATACTGGCTAACAATATGGCCGATGATTTTGCCTTTGGCGATAAGAATGGCGATGGTAAGGGTCGAAATGAACCCTTCTTCAAGCACCGCTGTCGCTATTGTGGGAAAGTGTTTGGCTCCGACTCCGCCCTGCAAATCCACATTCGTTCCCACACGGGAGAACGTCCCTTTAAGTGCAATGTGTGCGGCAGTCGCTTCACCACAAAGGGTAACCTCAAGGTGCATTTCCAAAGGCATGCACAAAAGTTTCCGCATGTTCCCATGAATGCCACACCCATACCAGAGCATATGGATAAGTTTCATCCGCCATTGCTGGATCAAATGTCACCGGATTGCTCACCCACACACTCACCGGCACCCGCAGCTGCGTCGGCACAGCCACCGGTAACGCTGCCCATAAGCTTTTCCTCGAGTCCTGCCTTTCCGGGCTTATATCGTCCTCCCATGGATATACTGAAATCATTGGGTGGAGGCGCTGGTTTGCCTCATCACCCGTTTTTTCCACAAATGCCTGGACTGAAGCATAATCAGGAAATGCCCACAGATCTGCGCAAGTCATCGGGGCCTAGTTCACCGCGAGAGGAGGAAGAAGAGATGGCTGGGAGAATGCCCGTCAAAACTGAGCTAATGGAGGAGAAGGAGCAACGTGAAGAGGacgaggaagaggaggaagagGCGGCCCAAaatgaacctgaacccgaaccttTGCCTTTGGAGGTGAGAATCAAGGAAGAACGTCTTGAGGAAGATCAAACCGAAGAAAGGCCACGTACCCCCTCACCTGCCGCTGCCAATCTGCCCTCAAGGCACTCACCCCAGGTTAGCCATCGCCATCAGCCAGCAGCGTCAGTAGCCGCTTATCCTGCGGTAGTGCAACCCATTCAACCACCTGCCCTCATGCATCCGCAGCCCTCGCCTGGCGAACATCTGCCCACACCCGGACAATTGCCTCCATCGATGACCCATCGTGAGGACTTCTTTGCCGAACGTTTTCCCCTTAACTTCACCACCTCCAAGACACACTCGCCCGAGCATCACTCCCCCAATCGTTCACCCGCCTCGGCTGCACTTGGTCCGCACGGTCCCCACGCTCACATTCCGCGTTCACCCTTCTTCAATCCCATCAAGCACGAGATGGCCGCCCTGCTGCCACGTCCCCACAGCAATGACAACTCGTGGGAGAATTTCATTGAGGTATCGAATACCTCGGAAACCATGAAGCTCAAGGAGCTgatgaagaacaaaaagatcAGCGATCCCAATCAGTGTGTGGTCTGTGATCGGGTGTTGTCCTGCAAGAGTGCCCTCCAGATGCACTATCGCACACACACGGGGGAGCGGCCCTTCAAGTGCCGGATCTGCGGACGTGCTTTCACCACCAAAGGCAACCTCAAGACTCATATGGCTGTGCACAAGATACGGCCACCCATGCGGAACTTCCATCAGTGTCCGGTGTGTCACAAGAAGTACTCGAATGCGTTGGTCTTGCAGCAGCACATACGTCTCCATACGGGCGAACCCACCGACTTGACGCCCGAGCAAATACAAGCAGCAGAGATACGTGATCCGCCACCGTCCATGATGCCGGGACACTTTATGAATCCGTTTGCGGCGGCCGCTTTTCATTTTGGAGCCATGCCGGGTGGAGGACCAGGACAAATGCCGCCCGGCATGGCCCCGCACAATGGAGCTGGCTTGGGTTCAGAGTCTTCGCAGGGAGATCTAGACGATAATATGGACTGCGGTGATGACTTTGATGACGATGTGTCCTCCGAACATCTCTCGAATAGCCACTTGGCCGAGGAGGGCGGTGAGCGACCACGTTCTGGGGATGACTTCAAGTCCTTGCTGTTTGAGCAGAAGTTGCGTATTGATGCCAGCGGAGTGGTTAATACCCATGCTCGGCCACGTTCGGCGGCCAACTCAGTGGGATCGACCTCAGCGCCCACCAGTCCCAACTCTCAGCCCAAGCCCAGCTCTTCGCCCGCACGCTCAGAGGCCTCGCAAGGCGCTCTAGATCTAACACCACGCGCAGcgccaccaccaccgccaccatCCACCTCCTCGCCCCACCTGGAACGCAGAGAAAAGGTCAGCAGTGCCTCGCCGCATACCATTCCCACGCCATCGGCCAGGAGTCCCcatgccgctgctgctgctccccTTCCGCCCTCCGTAGCCATTGATTGTCTGCCTCCGGGACTTCAGCATCATCTgcagcaacagcatcagcaTCTAATGCAACAGCAGTCCGCCTTGGCGGCTGCAGCTGCCgcgcagcatcatcatcatcagatgCAGCAACATGCAGCTGCACTGCATCAACATCAGGAGCAATTGCGTCGCGAAGCCCAAGAGGTGCAACACAAGGCGGCCGCAGCAGCCGCCGCAGCGGCAGCGGCTGCCCAACGGCAACAGACTTCACCACAGTCCTCGCCACGGATCAGTGAAGCGCCACCCGTTACACCCAACACCAGCAGCAACAATCAACCACCAAATCCTCTAATGGCCGCCCGACCACCCTTTGGCATGTTCCCCAATCTGCCATTGTTCCCGCCGGCTACCACGCAGAATATGTGCAATGCCATGAATCAGATTGCCCAATCCGTAATGCCTGCCGCTCCCTTCAATCCTCTTGCGCTGAGCGGAGTACGTGGCAGCACCACTTGCGGCATCTGCTACAAGACATTCCCCTGTCATTCGGCTCTGGAGATACATTACCGAAGTCACACCAAGGAGCGACCATTCAAGTGCAATATCTGTGATCGCGGTTTCACCACCAAGGGCAATCTCAAGCAACACATGCTGACACACAAAATCCGAGATATGGAACAGGAAACCTTTCGAAATCGTGCTGTAAAGTATATGAACGACTGGAACGATGAACGCGACTAA
Protein Sequence: MKNHLSNNVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSADKDTASDQEENGACSPLTTATASASPSRSSPQRHSEDEEPHHEDLDVSSNAEVSSKDEEQTETENQEDQADEAIEDNNNKVLVMTKPSPLNSSKTSEQAAMPSSPLTTGQAEEAVVNEKEMEVDVEMTEQEQQQQQEEEAPAQPTPPTPNQAMAAATPGAAPVTLEAIQNMQMAIAQFAAKTIANGATGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQAAKQSEEEEEFEVEEEREDGGTDTYEEEERIADMELRQKAEARMAEAKARQHLINAGVPLREASPAESLKRRREEEEEEEDSSRQPSRRISIEAGGSTSASRLRDTSAQDALAKLKEMENMPLPFGTDLASSIITNHDDLPEPNSLDLLQKRAQEVLDSASQGILANNMADDFAFGDKNGDGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDCSPTHSPAPAAASAQPPVTLPISFSSSPAFPGLYRPPMDILKSLGGGAGLPHHPFFPQMPGLKHNQEMPTDLRKSSGPSSPREEEEEMAGRMPVKTELMEEKEQREEDEEEEEEAAQNEPEPEPLPLEVRIKEERLEEDQTEERPRTPSPAAANLPSRHSPQVSHRHQPAASVAAYPAVVQPIQPPALMHPQPSPGEHLPTPGQLPPSMTHREDFFAERFPLNFTTSKTHSPEHHSPNRSPASAALGPHGPHAHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGAMPGGGPGQMPPGMAPHNGAGLGSESSQGDLDDNMDCGDDFDDDVSSEHLSNSHLAEEGGERPRSGDDFKSLLFEQKLRIDASGVVNTHARPRSAANSVGSTSAPTSPNSQPKPSSSPARSEASQGALDLTPRAAPPPPPPSTSSPHLERREKVSSASPHTIPTPSARSPHAAAAAPLPPSVAIDCLPPGLQHHLQQQHQHLMQQQSALAAAAAAQHHHHQMQQHAAALHQHQEQLRREAQEVQHKAAAAAAAAAAAAQRQQTSPQSSPRISEAPPVTPNTSSNNQPPNPLMAARPPFGMFPNLPLFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNDWNDERD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00914765;
90% Identity: iTF_00917490;
80% Identity: -