Lmag004629.1
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- CSRNP3
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010000913.1:135935-144165[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.34 4.9e+03 -2.1 2.9 85 103 61 79 16 117 0.55 2 3 6.4e-95 9.3e-91 304.3 8.0 2 218 313 516 312 516 0.91 3 3 0.79 1.1e+04 -3.3 0.3 68 82 581 595 572 617 0.38
Sequence Information
- Coding Sequence
- ATGGAGAGCATGTTCAGTCCGATTAAAAAGATTTTCacatatttacaaaaaaatgcaAGCAGCTCGAATATGTTTGGCCAAACTGCAACGACGACCCAaaccaccacaacaacaacaacaacaatcataatTGCCGACGAAGAAGGCGACGTTACGAGTATTCCGGTACAaacggaggaggaggaggaggaagagcaGGAGGCGGAGGAAGAGGAGCAAAAGGAACCCGATTTAGATTTGGAAGTTGAATTGGTATCAGAATTGCAGGACGAAGAGGAGGATGACATTGAGCGTCAAATAAAGACTTCCATAATCGATGCGAGCAAGGTTCACGCAGTTAAAGTGAAATCtttagagctacagctagatgATGAGTTGGCCGATTTTGCACACGACCCGGGTGAGCCAGCTCCGGTTGCATCATCTATACAAGAAGAAGTCCTAGAAGAGCTGGATGAGCTGGAGTTGGATAATTTCCGCAATGATGAGATTATTGTTATAGACTCCGATCTAAATTCATCACTGGCCTCGGATAATATATCCGAAGATCCATTGGCCATAGATAACATATTGGAGACTTCATCGGTGACCACCAATGAGGAGGTGGATACCAGTGGGGATTTGCTGTGGCTCAAATTGAATCCCGAAACGGAGGAAATAGGCAGCGTAAGTGGAGTTTCGGCTCATAATCAGGAGCAACCCTTGGAGGAGCAGGGCAAGCAGTCAAAGACCAAAGAGGAAGAGCTACGTAGCAGCAGCGATGGTGGCTCTGATTCGGGTCTGGGCAATGATCCTACACCCACACACACCAGCACCAGCCCCGCCAAACCGCTCAGATCGAATCTGAAGAGACGTCTAGAAGTTGAGGATGGCATGGAACTGGCCCTACCGGATATGGCTGCATCTGGTTCATCAAGCACGTCCCAACAAAAGCGTCCGAAGCGTAGCATTAACTTTGACAATGTCATAATTTACTATTTCCCACGCCAGCAGGGCTTCAGCTGTGTGCCCACCGCCGGAGGATGCACTCTGGGCATGGGTCCGCGGCATATTGCCTTCAAAACCATGACCCTGGCTGAGCATGCGGCCGAGCTGAGGCGTGCCCATCGTAGCCAAAATCAATCGGAATTGCAACCGCGTGGCTCCAGCAGCGATGATAGCGAGGAATCCGAGGAGGATTACCTTAGCGAGGGCAGCGGTTCGGATGCCGATGATGGCTCGAATGGCTTCCTACAGCCCGTGACGCCCAAGCAGAGGCGAGCTCTGCTGAAAGCTGCAGGCGTGCGCAAAATTGATGCCAGCGAGAAAATTGAGTGCCGTAATATACGCGATTCGCGCGAAGTTTGCGGCTGTTCCTGTCGAGAGTTTTGCGATCCGGAAACCTGCGCCTGCAGTCAGGCAGGCATTAAATGTCAGGTTGATCGTGCCATGTTTCCCTGTGGATGTTCGCGCGAGGCGTGTGGAAATACCGTGGGAAGGGTAGAGTTTAACCCAACACGGGTGAGAACACATTACATACACACAGTGATGCGTCTAGATTTGGAACAGCGGCAGGGAGTGCAGGGACAATTgcatcatcagcagcaacagcagcaggccACCTACTCGGGTGTATCATCCAATGCGCAGCCAGCGTCTAACCATTGCTATTTTATGCCCACGCAATCGAATTATAGTTCGGGCTATGCCTCACCTGCCTATACACCGGATAGCAGTGTCAGTGGTTACTaccaacatcagcagcagcagcagcaacaacaacagcaagtgGGAGCGACAGCTGGTACTGTGAATCCTCAACAGAATCAAAACGCTTACTCTAGTTATACTCAATTGGATAGCCTGGATTCGGGTCTGTTTGTAAGTGGCAGCAATGCCACACCCTCCTACGGTGAACTTTATCAATCGCTGAGCTATGGCAGTGCCCAGCTTACCTCCTATCAAGCCACCTACCAGCATACACCAACCGCTGCCACCAACGGCTCCTCTGCTGTCACGCCCAGTGCTTATAGTTCTTGCGCTGTGCCCTCGGCACCGCCGTTTGGAAATGCCACCACAACAGCCTCCTCCAATGCCCAATATCAAACCACCGCCTCCATGACAGCTGCCTCAACGAACGGCAGTTGTGCCTCGCGCCTTACTGGCAATTCTTCAACTTCCTCcgtcgccgccgccgccgtcgCTGCCTCATCAGCAGAATTTATAGGCCTCAATGCAAACATTTCCAGTTCCTCACGTCTCTCTCAGATCAATGATTTACTGCAACACAATCGCAGTGCCACAGCTGCCCTGGTGGCCGTCTCCGAGGCTTATGCTGGCGGTGTAATTAATGCCAGCACGAgttccaccaccaccaccaccactctTGATTCCATAGACACGCCACCCATTTTGGAGGATGTACAGCGTAGTTGTATGAACTTTGAGGAACTGCCGCCGCCTTTGGTCAATCCCACTCCTATTGTGGCTGTGGTTGAAACAAAATTACCACCTATAGTGTCCACTATCAGCACTACGCCGTCACCGCCAGCAGCCACACAAGGACCACAGCCACGTCAGCCGCTGGATGTGCAGGCTCTGGTCACAGAGACCACAACATAG
- Protein Sequence
- MESMFSPIKKIFTYLQKNASSSNMFGQTATTTQTTTTTTTTIIIADEEGDVTSIPVQTEEEEEEEQEAEEEEQKEPDLDLEVELVSELQDEEEDDIERQIKTSIIDASKVHAVKVKSLELQLDDELADFAHDPGEPAPVASSIQEEVLEELDELELDNFRNDEIIVIDSDLNSSLASDNISEDPLAIDNILETSSVTTNEEVDTSGDLLWLKLNPETEEIGSVSGVSAHNQEQPLEEQGKQSKTKEEELRSSSDGGSDSGLGNDPTPTHTSTSPAKPLRSNLKRRLEVEDGMELALPDMAASGSSSTSQQKRPKRSINFDNVIIYYFPRQQGFSCVPTAGGCTLGMGPRHIAFKTMTLAEHAAELRRAHRSQNQSELQPRGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRALLKAAGVRKIDASEKIECRNIRDSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCSREACGNTVGRVEFNPTRVRTHYIHTVMRLDLEQRQGVQGQLHHQQQQQQATYSGVSSNAQPASNHCYFMPTQSNYSSGYASPAYTPDSSVSGYYQHQQQQQQQQQQVGATAGTVNPQQNQNAYSSYTQLDSLDSGLFVSGSNATPSYGELYQSLSYGSAQLTSYQATYQHTPTAATNGSSAVTPSAYSSCAVPSAPPFGNATTTASSNAQYQTTASMTAASTNGSCASRLTGNSSTSSVAAAAVAASSAEFIGLNANISSSSRLSQINDLLQHNRSATAALVAVSEAYAGGVINASTSSTTTTTTLDSIDTPPILEDVQRSCMNFEELPPPLVNPTPIVAVVETKLPPIVSTISTTPSPPAATQGPQPRQPLDVQALVTETTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919810;
- 90% Identity
- iTF_00919810;
- 80% Identity
- -