Lmag024444.1
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- F54F2.9
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010004142.1:385290-386927[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-08 0.00013 22.7 0.0 4 38 311 348 308 349 0.87 2 2 6.6e-09 1.1e-05 26.1 0.2 3 43 403 448 401 450 0.87
Sequence Information
- Coding Sequence
- ATGCACGCTCGCACCCAGATCCGTAGCCCGctaccgctgctgctgctgttggtgctACTGGCAACAGGGCAGGTCAGTGCTTGGCATTCCGAGGAGCTGGAGATTTTCGACTTGGTCGAGGAGATCAACCAGAATTTTTACGAATTTATGGGCATCAATCAGACCGCCACCAATAACGAGATTAAGCGCGCCTTTCGCACTCTGTCCATTGTTTTGCATCCGGATAAGAATCCAAATTCTGCCGAGGATGCCAACATACAGTTTCGCAATCTCGTCTCCATCTATGAGGTGCTGAAGGACTCCTCCAAGCGGGAGAAGTATGACAAGGTGTTGCGCGATGGCATGCCCaattggaagtcggctctctaCTATTATCGACGCATGCGTAAGATCGGCCTGTACGAGGGCGCCTTCATCCTGTTCCTGATCACCACAGTGGGGCAATATCTATTTGCCTGGGCCGCCTATCTGGAGAAGAAGTACACGGCCGAGCAGGTGTTTGGCACCAAGCTGAAGAAGCTgcagaagaaaaacaaaaacattgacaTGGACGTTATCCTCAGTGAGATACCCATACCCTCGCTACTTAATACGCTGCCCGTGCAGATTCCCTTGGCCCTGTGGCATCTGCCCCGCACCATTAAGAATGGTTTTAGCAAGGCCAACGAGCTCAAGGAGCTGGCACTGGAGAAGCGCCGCCAAGAACTGGAGGTGGCACGTCGCCAGGAGGAACTGGAACGCGAGGCCGAGGAGCAGACGCGTCTGCGTAAGGAGCACAAAGAAAATCTGCGAAAACGCAAGCAGAACAGCAAGGCGCCCGAGAAGACGGAAGAGGAGCTGCGTGGTTACTCGCAGATACAGGCACGCGAGCTCACCGATGACGATGCAGTGCGTCCGGCTGCGCAAAAGAACACGGTCAGTGGCGGCTTTTGGACAGATGAGGATCTCACTGAGCTTATACGCCTCGTCAAGAAGTATCCAGGCGGCGCCGGCAGTCGCTGGAATACCATAGCTGAGTCCATGAATCGCACCGTACAGGAAGTAACCTTCATGGCGGCCAAAATGAAGGAGAATGGCTATCGCATACCGGGACAAAGTCAGAcggatcccctggtccaggacGCGCAGAAGGCGAAAagaagcgctgctgctgctgccgcctgtGCGCCCAGCCAGAGTGAAAAGAGCATGCTGATACCAGAAACCAACTGGACACAGGAACAGCAGCGTGCCCTAGAAGCGGCCATTGTTAAATATCGCAAAAATGCTGGCGGGGATCGCTGGCAAAAGATAGCCAACAGTGTGCCCGAAAAGACCAGAGATGAGTGCCTGGTGCGCTATAAATATCTCTGCGAACTGGTCAAGACGCAGAAGAAGGCCGACGAGGAGGCGGAGGCGGAAGCTGGCCAAGCAGATGTTCTCTCCTCCGAGGagcagccgccgccgccgcccacCGTAGCCGAAGAGACCGAGACGGCCCCGTCCAAAAAGCTCAGTAAACGCGAACAGCGTCGACGCAAGCGTGATCTGTCCAGTGGCGAGGACTCGGACGATGCATATCAGTACGAGATCAGCTAA
- Protein Sequence
- MHARTQIRSPLPLLLLLVLLATGQVSAWHSEELEIFDLVEEINQNFYEFMGINQTATNNEIKRAFRTLSIVLHPDKNPNSAEDANIQFRNLVSIYEVLKDSSKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFILFLITTVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMDVILSEIPIPSLLNTLPVQIPLALWHLPRTIKNGFSKANELKELALEKRRQELEVARRQEELEREAEEQTRLRKEHKENLRKRKQNSKAPEKTEEELRGYSQIQARELTDDDAVRPAAQKNTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRTVQEVTFMAAKMKENGYRIPGQSQTDPLVQDAQKAKRSAAAAAACAPSQSEKSMLIPETNWTQEQQRALEAAIVKYRKNAGGDRWQKIANSVPEKTRDECLVRYKYLCELVKTQKKADEEAEAEAGQADVLSSEEQPPPPPTVAEETETAPSKKLSKREQRRRKRDLSSGEDSDDAYQYEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00616831;
- 90% Identity
- iTF_00915265; iTF_00916165; iTF_00918984; iTF_00919758; iTF_00917136; iTF_00914435;
- 80% Identity
- -