Lmag004015.1
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- ttk
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010000826.1:937488-952671[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-19 1.5e-15 57.3 0.0 2 45 572 616 571 616 0.97
Sequence Information
- Coding Sequence
- ATGTCTGTGCAGCAGTTCTGCCTGCGCTGGAACAATCACCAGCCGAACTTTATATCGGTGTGCTCATCGCTGCTGCACAATGGCACCTTGGTGGATGTTACGCTCGCAGCGGAGGGTCGCCAGCTGCAGGCCCATAAGATTGTGCTCTCCGCCTGCAGCTCGTACTTTCAGGCGCTGTTCACCACGAATCCTTGCCAGCATCCGATTGTCATACTGAAGGACGTGCAGTACGATGATCTCAAGACCATGGTGGACTTTATGTACTATGGTGAGGTGAATGTGTCGCAGGAGCAACTGCCGCACATACTTAAAACGGCCGAGATGCTCAAGATCAAGGGTCTGGCCGAAATGCCCACAGATCCGGCCAATCTCACCAAATCGGACAGCAAGTCCTCCACTGATGGAACCGAACTCGTTGGCGGCTCCAATGTGGCTGGATCCGCAACTGGTGCGTCTGGAGGCAGCATTGGGGCGGGCAGTGGCAGCAGTGTGGGCGACTCTCTTTGGAGTAGCAGTGAGGCGCAACagttccagcagcagcagcaacaggcccagcagcaacaacagcaggctcaacagcagcagcagcatcaccaCCAGCATCATCAGCAACAgctgcaacaacagcagcagcaacagcagcagcagcaacaacaacagcagcaacaccatcatcatcatcaccagcagcaacagcagcaggcaGGGCAAACGCATCACCATCAAATGCGACGCACTCCATCGCCTCTTAGTGCTGGCACGTCGCCGGCCACGCGGCGTAAAAGATTACGCAAATCCTCGAATAACGGCTCTGGTGACCGCAACAACTCAGATGAGCAGCACAATAGCTCATTGGATGCTGGAGCAGCGGGCAGTGCCGCTGGTAGCGCAGCCGGTCTCAGTCTTGCCCAAATGAGCCAAATGTCATTTGGTGCCGGTGCCAATACAGCGGCTGCCTTGGGTAGCCTTACGGCTCATTCCCTGCATGCGGCCAAGCTGCTTAAGGAGTCTGCAAGCAACGAACTGGAACCACAGCCACAGGACTCGGATTTGGATGATGGACACGGACACATACATATGCAAATTAAACCCGAGGTGGATATTGGTGGAGTAAATCAATCAATGCCCCTGGATATTTCGGGCGCCACCACACCATCGGAACATGATGCGCCCAATTCGCAATCGTCGCATTCGGGTCTGCAATGGACAGTTGTCGATTCAAACTATCCGCGCTTTTCCCTGCCCGCCTGCCAGTCCAACTTGCTGGGCAATGGCGGCGGCAATCCGAGCAGCGGCGCGAATAGTAGCGCCGGCGGCGGAGTAGGCGGTGGCGGCAGCGGTACCAGCGATCAGCAACGGCAACAACAGCACGAggcccaacagcagcagcatctgcAGCAGCTGCActatcaacagcagcagcagcaacaacaacagcaggagCAGAGTGCCTCCGGCCAGGCTTACTCGTCGCAGATCATAACCGTGAACAATCTAGTCAGCGGGTATGCGACGGCAGCCCAGAACCTATCGCCCACTTCACCCAATGAGTCCAATATGGTGCAATCGGTTTACAGCCAGGGACCGACGCCCACACAATCGCCAGTACATTCGGGTGGTGGCAGCGGCGGCGGGGCTGCAGGAAACAGCGGCAGTGCCGGTGTAGCCGCTGGTCAAGTGGTCAAACGAAAGCGTTCGGTGAATCCGCAGGGGGATGAGAATTTCATACGCGCCCTGGAGGCGGTGCGTACGGGGGGTATTGGATTTTGCAAAGCAGCCCGTCTGTATGGAGTGAACAATCGCACGCTGTGGTTGGAGTACAAGAAGCGCGGATATCCAGTGTCGCGACCTAGCATAAAGGCGCGTGTGGTCAAACAGGAGCCGAACCTCTCACCCTCGCCCACACCATCCACAAATCCGGGCGATGACAATACCAACGAGACTCTCAATATGCAGATGCCGCCGCAGGCGGAGACGCCAACGCCATCGCTCATGTGCACGCCCCACGCCCACGCTAGCCTGGGCAGCAGTGCGGGCACACTGCCTGGCGCAGGTGGTGCCGGCAACACACATCCGGCCATTGGTGTGATGAGCCTTTTCGATGCACGTTACATGGACTCACCGGGCAGCGTGCACACCATGTCCCGGCAGCGATATATCGATGCCACAGGCGCCGGAGCCGGGGCCGCTGGCAATGTGAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTTAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSTDGTELVGGSNVAGSATGASGGSIGAGSGSSVGDSLWSSSEAQQFQQQQQQAQQQQQQAQQQQQHHHQHHQQQLQQQQQQQQQQQQQQQQHHHHHHQQQQQQAGQTHHHQMRRTPSPLSAGTSPATRRKRLRKSSNNGSGDRNNSDEQHNSSLDAGAAGSAAGSAAGLSLAQMSQMSFGAGANTAAALGSLTAHSLHAAKLLKESASNELEPQPQDSDLDDGHGHIHMQIKPEVDIGGVNQSMPLDISGATTPSEHDAPNSQSSHSGLQWTVVDSNYPRFSLPACQSNLLGNGGGNPSSGANSSAGGGVGGGGSGTSDQQRQQQHEAQQQQHLQQLHYQQQQQQQQQQEQSASGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGGGSGGGAAGNSGSAGVAAGQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDNTNETLNMQMPPQAETPTPSLMCTPHAHASLGSSAGTLPGAGGAGNTHPAIGVMSLFDARYMDSPGSVHTMSRQRYIDATGAGAGAAGNVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00483609;
- 90% Identity
- iTF_00917123;
- 80% Identity
- iTF_00918227;