Lfen021414.1
Basic Information
- Insect
- Lordiphosa fenestrarum
- Gene Symbol
- grn
- Assembly
- GCA_035044985.1
- Location
- JAWNNO010006974.1:87917-140273[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.5 1e+04 -3.4 0.2 6 19 246 259 245 260 0.77 2 3 2.6e-19 7.5e-16 57.8 4.7 1 35 433 466 433 467 0.98 3 3 9.1e-19 2.6e-15 56.1 6.3 1 35 493 526 493 527 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTATGACAGTCCGCGCttaggcggcggcggcggcggcggttcACCACACCATTCCAATGGTCTGGGCAGCACGGGCAGCAGTTTGGCCGCCCACAGTCATCACAGCCTGTCCAGCGGCGCCTCCTCGGCGGGCAGCAGTGTGGGCACTGGCCTGGGTGGTGGTGCCAATGCCGGACTGGGACTGGATACCAGCGATATGAGTGCGTTCTATGCGCTGGAAAGTAATGGCCATCATCGCAGATATTATCCGAGCTATCATCAGCACACTTCCCGCATGCCCTCGTCACATGCCACGCCCCAAGTGTGCCGGCCGCACTTTCATACACCGCTGAGTCCCTGGCTGACCAGCGAGCACAAGTCGTTTGCACCCGCCAGCGCCTGGAGCATGGGGCAGTTCGCCTGCCCGCAGGAGCCGCAGGTGGATCACAAGCTGGGCCAAGTGGGGCAAAGCCATCAGACGACAGCGGCGGGCCAGCACTCGTTTCCCTTTCCACCGACACCGCCAAAGGACTCGACGCCCGACTCAGTGCAAACGGGTCCATCCGAATACCAGGCGGTGATGAACGCGTTCATGCACCAACAGGCCACAGGCTCTACCTCACTGACGGACGCCAGCTGTGCGCTGGACATCAAGCCCTCGATACAAAACGGAGCGGGTAGCGCATCCTCGGCGCACACCGGCAACGTACCCAATCAGACATCAACGCCAAAGCAGCGCGAAGGTAGTAGCAACCAGAACAATAACACTAGctccaccaccagcagcagcaacaatgccagccagcagcagcaacagcagcagtctAGCAAtgcctcctccgcctccaccTCCGCCTCAGCCTCCACCTCAAACGGCCTATTCGACGGCACTGCCCAGGCCCACTATGCGGCCAACAACGCGGCTGCCAATAGCACGGGCTACGACAGCAGCAGCTATGCCTCCTACCACCATGCGGCCGCTCACCACCAGGCGGCCGTGGCGGCGGCCAATATGTTCCAAAGTTCCTCggtggcagcggcggcggtTAGGCATAGCATGGGCgcggctgcggcggcggcagcgcaCCATCATCACCACCACAGTAGTCACCACCAGTCCTCCTCCGCGGGCTCGAGTGCGGGGGGCATGCATGGCTCCGGTATGGGTGGCTTGGGCAATGGCGGCTGTGGCCAGGATATCAAGCCGGGCGGTGGCAGTGGACTCGATGTGAAGCCCGTGCGAACGAAACCCCGGACAAGTGCTGAGGGTCGCGAATGCGTTAATTGTGGAGCCACCTCAACGCCGTTGTGGCGACGCGATGGTACCGGACATTATCTATGCAATGCCTGTGGCCTTTACTACAAAATGAACGGCCAGAATCGACCACTGATCAAGCCAAAGCGAAGACTGACGCTGCAGTCCTTGCAGAGTGCGGCCAAGAGAGCTGGCACATCCTGCGCCAATTGCAAAACCACAACCACAACCCTTTGGCGACGGAATGCCAGCGGTGAACCAGTGTGCAATGCCTGCGGATTGTACTACAAGCTGCATAATGTCAATCGTCCGCTCACCATGAAGAAGGAGGGCATTCAGACGCGTAATCGCAAACTCAGCTCCAAGTCCAAAAAGAAGAAGGGTCTGGGAGGCGGTTGCCTGCCCATTGGCGGTCATCTGGGTATGGGTGACTTTAAGCCGCTGGATCCGTCCAAGGGTTTTGGAGGCGGTTTCTCGGCCTCGATGGCGCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCGCATGCGCATATGCATGGCAGTTGGTATACCGGCGGTATGGGCGCATTGGGTGCGTCGAGTGGTCTGCAGGGAGGCTTCTCAACGGCCGGCTCGCTGAGTGGCGGTGTGGTGCCACACTCGCAGCCCTATCACTTGGGTCTGGGATCTATGGGCACTTGGCGTACAGACTATACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGGGGGSPHHSNGLGSTGSSLAAHSHHSLSSGASSAGSSVGTGLGGGANAGLGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQEPQVDHKLGQVGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGAGSASSAHTGNVPNQTSTPKQREGSSNQNNNTSSTTSSSNNASQQQQQQQSSNASSASTSASASTSNGLFDGTAQAHYAANNAAANSTGYDSSSYASYHHAAAHHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHSSHHQSSSAGSSAGGMHGSGMGGLGNGGCGQDIKPGGGSGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLSGGVVPHSQPYHLGLGSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919543;
- 90% Identity
- iTF_00914975;
- 80% Identity
- -