Basic Information

Insect: Lordiphosa fenestrarum
Gene Symbol: Znf574
Assembly: GCA_035044985.1
Location: JAWNNO010000731.1:4107817-4109862[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.79 50 5.0 1.7 2 23 316 338 315 338 0.94

2 10 0.048 3.1 8.8 0.1 6 23 348 365 348 365 0.98

3 10 6.7e-05 0.0043 17.8 4.6 1 23 371 393 371 393 0.99

4 10 0.57 36 5.4 0.6 1 14 402 415 402 425 0.74

5 10 0.00032 0.02 15.7 2.8 1 23 433 456 433 456 0.97

6 10 0.21 13 6.8 0.4 3 23 464 485 462 485 0.92

7 10 0.66 42 5.2 0.2 2 23 497 519 496 519 0.93

8 10 0.0021 0.13 13.1 4.1 1 23 526 549 526 549 0.93

9 10 2.4e-06 0.00016 22.3 1.4 1 23 555 577 555 577 0.98

10 10 0.054 3.4 8.7 3.3 1 23 583 606 583 606 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.79	50	5.0	1.7	2	23	316	338	315	338	0.94
2	10	0.048	3.1	8.8	0.1	6	23	348	365	348	365	0.98
3	10	6.7e-05	0.0043	17.8	4.6	1	23	371	393	371	393	0.99
4	10	0.57	36	5.4	0.6	1	14	402	415	402	425	0.74
5	10	0.00032	0.02	15.7	2.8	1	23	433	456	433	456	0.97
6	10	0.21	13	6.8	0.4	3	23	464	485	462	485	0.92
7	10	0.66	42	5.2	0.2	2	23	497	519	496	519	0.93
8	10	0.0021	0.13	13.1	4.1	1	23	526	549	526	549	0.93
9	10	2.4e-06	0.00016	22.3	1.4	1	23	555	577	555	577	0.98
10	10	0.054	3.4	8.7	3.3	1	23	583	606	583	606	0.97

Sequence Information

Coding Sequence: ATGGTAAGCTGCCTGCTCTGTCTGGACGAGTATCAAACGATGCCCGGGGACTATATTGAACTGAGTTCCGCCAAGGGAGTTCAATTCGAGATTGAGAAGATTATCAGCAAGCATTTTGGAATCAGCAGCAGTCGGCAGAATGATCGGATTTGCGTGCTCTGCTGGAAAACCGTGTCCGACTTCCATGCGCTGCACGAATTCGTTAGCGCAGCTCAAATCTCGCTGCAGGAAACCAAGGTGGTGCTCATGGAGGATGATCCTTTGACGCAGGGCAAAGAGACGGAGGTGGAGGCAGAAGCGGAGGCGGAGCCGGAAAATTTCTTCTATCCAGAGGTGAAAATAGAGGAGCATGAGCTGGATCACCTGCCCAAGATTGAAATACTGGAATCAAGAGCCCAAGAGGAGCAGGCGGTGGGCAAGACAGGCCCCAGGCGACTACGGAAAAGAGTCAAGGCTGAGGACGAGGCTGTTTTGGATGGTGAGCTGGATTTGACAGCTGAGGCAGCTCCCAAAAAACGTCGAGGGCGTCCTCGCAAATCAGACTTGCCCGCTGCGGTTCCCCCACCTTCGTTACCAGAAACAACAGAGCCACCAGTAGACAAATCTGCGGACTTAAAggcagaggaggaggaggaagaaaaTGCAGACTTCAGTGATGATGGCTTGCCCGATGCAGATTTTATATGCCCAGCTGATGGCAGCTCCGACGAAGGCGAGGAGAGCCTGGAAAACTCCGACTCTGACTTTGAGCTGGGGGATAACCCCACACAGAAGCTGAAATTTGCAGACATACCCAAGCGAACCGTGGTACGTcccaagaaatacaaaaagagAACCAAACCGGCCGAGCCCAAGGTGCGCATGTCGCGTGAGATGCTGGAACAGCGTCGGAAACAACAGGAGGAGTATGACGAGATTATTGCCAAGTTCTTCAACAAGGTCTTGCCCTGTCCCATTTGCAATCTGCTGGTGCACAACTTCACCGAAATGCAACGCCATCATCGCCTCTCCCATCAGGTGGACCCGGGCTATATGATGTGCTGTGGGCGCAAATTCACACAGCGAAAGGTCCTGGCCGAGCACGTGCAGGTGCACTGGAATCCCGACCACTTCAAGTGTGAGACCTGCCTGAAATCATTCCAAAACTCGCGCCACTTGGAGTCGCATCAGCAAACGCATTTAGATCCGGTCATCAAGCTCACATTCCAGTGTGATCTCTGCTCCAAGGTGTTCCTCAGCAAGACGGCCATTGACTATCACAAGCTGAACAAGCATGTGCCCAAGTCGGAGTTCAAGTTCACCTGTACGGAGTGCAACAAGAAATTCCTTACGGAACGGAAGCTGAAAAACCACATGAACAGCATGCACGATCCAGAGAGCGCCATCATCTGTGACAAGTGTGGCAAACAGATGCGCaccaaaatcattttgaagAAACATCAAGAATTGATGCACTCGGACAAACCCCGGCCCGAGCCGGAGCTAAAGCAATGCCAGATCTGTGGGGCCTGGCTGAAGGGCATGACTGGATTGAAGCAGCACATGAAGAGCATTCATGTGGAAAGTGCGGGCGAGCATCGCTGTCACATTTGCAGCAAGGTGTCGCCCAATGCGCGTGCCCTGCGGCGTCACATCTATCACAATCACGAGTGTGAGCGGAAATTCAAGTGTACCATGTGTGAAAAGGCCTTCAAACGGCCGCAGGAGCTAAAGGAGCACACCTCCACGCATACGGGCGAGGTTTTATACACCTGTCCCAACTGTCCCATGACTTTCTTCTGCAGCGCCAACATGTACAAGCATCGCCAGCGTCTGCATCGTGCCCAGTATGAGGCCGACAAGAATCAACCCAAACCGCcgaatattctgaaaatttcacGCAATGCCTCCTCACAGAACAAAACCAAGCAGGAGATCTAA
Protein Sequence: MVSCLLCLDEYQTMPGDYIELSSAKGVQFEIEKIISKHFGISSSRQNDRICVLCWKTVSDFHALHEFVSAAQISLQETKVVLMEDDPLTQGKETEVEAEAEAEPENFFYPEVKIEEHELDHLPKIEILESRAQEEQAVGKTGPRRLRKRVKAEDEAVLDGELDLTAEAAPKKRRGRPRKSDLPAAVPPPSLPETTEPPVDKSADLKAEEEEEENADFSDDGLPDADFICPADGSSDEGEESLENSDSDFELGDNPTQKLKFADIPKRTVVRPKKYKKRTKPAEPKVRMSREMLEQRRKQQEEYDEIIAKFFNKVLPCPICNLLVHNFTEMQRHHRLSHQVDPGYMMCCGRKFTQRKVLAEHVQVHWNPDHFKCETCLKSFQNSRHLESHQQTHLDPVIKLTFQCDLCSKVFLSKTAIDYHKLNKHVPKSEFKFTCTECNKKFLTERKLKNHMNSMHDPESAIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELKQCQICGAWLKGMTGLKQHMKSIHVESAGEHRCHICSKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQYEADKNQPKPPNILKISRNASSQNKTKQEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00918553;
90% Identity: iTF_00914841;
80% Identity: -